source: branches/4.2/components/bio-formats/src/loci/formats/in @ 6375

Name Size Rev Age Author Last Change
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AliconaReader.java 8.3 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
AmiraReader.java 14.6 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
AnalyzeReader.java 9.5 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
APLReader.java 10.4 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
APNGReader.java 8.6 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ARFReader.java 5.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
AVIReader.java 17.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
BaseTiffReader.java 16.1 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
BDReader.java 17.5 KB 6358   10 years melissa Added missing implementations of isSingleFile(String), …
BIFormatReader.java 2.6 KB 6141   10 years curtis Use generics where appropriate; fix miscellaneous warnings and issues.
BioRadGelReader.java 5.3 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
BioRadReader.java 39.1 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
BMPReader.java 8.5 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
BurleighReader.java 5.6 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
CellomicsReader.java 5.4 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
DefaultMetadataOptions.java 1.8 KB 6069   10 years callan A scaffold to support metadata configurability of readers.
DeltavisionReader.java 36.5 KB 6370   10 years melissa Updated Deltavision and Flex readers to use …
DicomReader.java 75.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
EPSReader.java 8.6 KB 6294   10 years melissa Added API for tiled image and multi-file export (see #413 and #486). …
FakeReader.java 12.2 KB 6319   10 years curtis Change gradient to always start at smallest possible value for integer …
FEIReader.java 4.6 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
FitsReader.java 4.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
FlexReader.java 55.4 KB 6370   10 years melissa Updated Deltavision and Flex readers to use …
FluoviewReader.java 20.0 KB 6316   10 years melissa Parse XY dimensions from IFD.PAGE_NAME entry, if present.
FV1000Reader.java 47.4 KB 6364   10 years callan Merging r6359,r6360,r6362,r6263 from Trunk into 4.2 branch.
GatanDM2Reader.java 7.1 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
GatanReader.java 14.2 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
GelReader.java 6.6 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
GIFReader.java 13.5 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
HISReader.java 8.2 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ICSReader.java 31.2 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
ImaconReader.java 6.6 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ImageIOReader.java 3.9 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ImarisHDFReader.java 13.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ImarisReader.java 7.3 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ImarisTiffReader.java 5.5 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ImprovisionTiffReader.java 7.7 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
InCellReader.java 30.0 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
IPLabReader.java 12.0 KB 6329   10 years melissa Fixed a couple of bugs exposed by the test suite.
IPWReader.java 9.3 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
IvisionReader.java 10.4 KB 6329   10 years melissa Fixed a couple of bugs exposed by the test suite.
JEOLReader.java 5.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
JPEG2000Reader.java 5.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
JPEGReader.java 1.5 KB 4953   11 years melissa Switched licenses from GPL v3 or later to GPL v2 or later.
JPKReader.java 4.2 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
KhorosReader.java 5.2 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
L2DReader.java 11.1 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
LegacyND2Reader.java 6.7 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
LegacyQTReader.java 7.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
LeicaHandler.java 35.5 KB 6315   10 years melissa Updated Filter population to use new LightPath model.
LeicaReader.java 44.8 KB 6364   10 years callan Merging r6359,r6360,r6362,r6263 from Trunk into 4.2 branch.
LEOReader.java 3.9 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
LiFlimReader.java 17.3 KB 6370   10 years melissa Updated Deltavision and Flex readers to use …
LIFReader.java 11.5 KB 6303   10 years melissa Fixed bug that caused get*BitLookupTable() to return null if openBytes had …
LIMReader.java 3.9 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
loci_formats_in_LegacyND2Reader.cpp 10.6 KB 6026   10 years melissa Merging cleanup branch back into trunk.
loci_formats_in_LegacyND2Reader.h 5.1 KB 3498   12 years melissa Rewrote LegacyND2Reader to use our own native bindings.
MetadataLevel.java 1.3 KB 6074   10 years callan PIXELS_ONLY --> MINIMUM metadata level.
MetadataOptions.java 1.3 KB 6069   10 years callan A scaffold to support metadata configurability of readers.
MetamorphHandler.java 6.5 KB 6068   10 years melissa Catch NumberFormatException when parsing exposure times, and adjust SizeC …
MetamorphReader.java 43.8 KB 6367   10 years melissa Prevent StringIndexOutOfBoundsException.
MetamorphTiffReader.java 5.3 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
MIASReader.java 35.2 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
MicromanagerReader.java 17.2 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
MINCReader.java 5.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
MinimalTiffReader.java 10.7 KB 6188   10 years melissa * Updated a few more readers to respect MetadataOptions. * Fixed a couple …
MNGReader.java 8.2 KB 6335   10 years melissa Moved SizeT population to prevent it from being 0. See  omero:2377.
MolecularImagingReader.java 5.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
MRCReader.java 6.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
MRWReader.java 7.4 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
NAFReader.java 5.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
NativeND2Reader.java 44.5 KB 6349   10 years melissa Fixed various bugs exposed by test suite.
NativeQTReader.java 19.4 KB 6349   10 years melissa Fixed various bugs exposed by test suite.
ND2Reader.java 1.8 KB 5517   11 years melissa Added two new methods to IFormatReader: boolean isSingleFile(String) …
NiftiReader.java 13.9 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
NikonReader.java 13.8 KB 6221   10 years melissa Fixed Nikon type, compression, and image count detection bugs.
NikonTiffReader.java 10.3 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
NRRDReader.java 9.1 KB 6333   10 years melissa * Removed hopefully obsolete hack from RandomAccessInputStream.findString. …
OMETiffReader.java 20.8 KB 6358   10 years melissa Added missing implementations of isSingleFile(String), …
OMEXMLReader.java 13.5 KB 6306   10 years melissa Exported OME-XML files can now be read.
OpenlabRawReader.java 5.9 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
OpenlabReader.java 22.3 KB 6349   10 years melissa Fixed various bugs exposed by test suite.
OxfordInstrumentsReader.java 6.1 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
package.html 80 bytes 1351   14 years curtis Package descriptions for many packages.
PCIReader.java 11.6 KB 6369   10 years melissa Fixed a few SimplePCI dimension bugs.
PCXReader.java 4.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
PerkinElmerReader.java 26.7 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
PGMReader.java 5.4 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
PhotoshopTiffReader.java 8.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
PictReader.java 18.8 KB 6334   10 years melissa * Prevent PICT reader from reporting width or height less than 0. * Fixd …
PrairieReader.java 13.6 KB 6375   10 years callan Merging r6272,r6373,r6374 from Trunk
PSDReader.java 8.4 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
QTReader.java 1.8 KB 5517   11 years melissa Added two new methods to IFormatReader: boolean isSingleFile(String) …
QuesantReader.java 5.4 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
RHKReader.java 6.1 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
SBIGReader.java 6.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ScanrReader.java 16.7 KB 6358   10 years melissa Added missing implementations of isSingleFile(String), …
SDTInfo.java 27.4 KB 5093   11 years curtis Fix a bunch of Eclipse warnings.
SDTReader.java 7.1 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
SeikoReader.java 3.5 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
SEQReader.java 5.2 KB 6190   10 years melissa * Updated remaining readers to respect MetadataOptions. * Added bounds …
SlidebookReader.java 19.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
SMCameraReader.java 3.6 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
SVSReader.java 4.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
TargaReader.java 7.5 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
TCSReader.java 16.7 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
TiffDelegateReader.java 1.8 KB 6026   10 years melissa Merging cleanup branch back into trunk.
TiffJAIReader.java 6.2 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
TiffReader.java 12.3 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
TillVisionReader.java 15.0 KB 6358   10 years melissa Added missing implementations of isSingleFile(String), …
TopometrixReader.java 5.7 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
UBMReader.java 3.2 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
UnisokuReader.java 6.3 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
VGSAMReader.java 3.4 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
VisitechReader.java 8.8 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
WATOPReader.java 4.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ZeissLSMReader.java 64.8 KB 6368   10 years melissa A few more LSM-related fixes.
ZeissZVIReader.java 55.8 KB 6361   10 years melissa Fixed several TIFF, Zeiss LSM and Zeiss ZVI bugs exposed during testing.
ZipReader.java 3.7 KB 6121   10 years melissa Preliminary support for reading Zip files with multiple entries. Closes …
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