source: branches/4.2/components/bio-formats/src/loci/formats/in @ 6626

Name Size Rev Age Author Last Change
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AliconaReader.java 8.2 KB 6507   10 years melissa Couple of minor reader fixes.
AmiraReader.java 14.6 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
AnalyzeReader.java 9.5 KB 6495   10 years melissa Updated email address.
APLReader.java 10.4 KB 6301   10 years melissa Added 'boolean hasCompanionFiles()' to IFormatReader. See #438.
APNGReader.java 8.6 KB 6495   10 years melissa Updated email address.
ARFReader.java 5.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
AVIReader.java 17.9 KB 6430   10 years melissa * Updated OMEXMLMetadataImpl based on  ome-xml:r618. * Fixed a bunch of …
BaseTiffReader.java 16.1 KB 6495   10 years melissa Updated email address.
BDReader.java 17.3 KB 6457   10 years melissa Moved ome.xml.r201004.* to ome.xml.model.*.
BIFormatReader.java 2.6 KB 6141   10 years curtis Use generics where appropriate; fix miscellaneous warnings and issues.
BioRadGelReader.java 5.3 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
BioRadReader.java 38.8 KB 6495   10 years melissa Updated email address.
BMPReader.java 8.5 KB 6495   10 years melissa Updated email address.
BurleighReader.java 5.6 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
CellomicsReader.java 5.4 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
DefaultMetadataOptions.java 1.8 KB 6069   10 years callan A scaffold to support metadata configurability of readers.
DeltavisionReader.java 36.5 KB 6495   10 years melissa Updated email address.
DicomReader.java 75.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
EPSReader.java 8.6 KB 6495   10 years melissa Updated email address.
FakeReader.java 13.7 KB 6626   10 years curtis Backport r6625 to 4.2 branch.
FEIReader.java 4.6 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
FitsReader.java 4.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
FlexReader.java 55.4 KB 6457   10 years melissa Moved ome.xml.r201004.* to ome.xml.model.*.
FluoviewReader.java 19.9 KB 6495   10 years melissa Updated email address.
FV1000Reader.java 47.7 KB 6534   10 years melissa Fixed a few issues with 16-bit LUTs.
GatanDM2Reader.java 6.9 KB 6376   10 years melissa Updated remaining readers to use enumeration handlers.
GatanReader.java 14.0 KB 6495   10 years melissa Updated email address.
GelReader.java 6.6 KB 6495   10 years melissa Updated email address.
GIFReader.java 13.6 KB 6487   10 years melissa Minor fixes to make metadata level tests pass.
HISReader.java 8.0 KB 6376   10 years melissa Updated remaining readers to use enumeration handlers.
ICSReader.java 30.5 KB 6573   10 years melissa Fixed GZIP pixel data detection for ICS files.
ImaconReader.java 6.6 KB 6495   10 years melissa Updated email address.
ImageIOReader.java 3.9 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ImarisHDFReader.java 13.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ImarisReader.java 7.3 KB 6495   10 years melissa Updated email address.
ImarisTiffReader.java 5.5 KB 6495   10 years melissa Updated email address.
ImprovisionTiffReader.java 7.7 KB 6406   10 years melissa Updated several TIFF-based readers to populate Image.Description more …
InCellReader.java 29.8 KB 6495   10 years melissa Updated email address.
IPLabReader.java 12.1 KB 6495   10 years melissa Updated email address.
IPWReader.java 9.3 KB 6495   10 years melissa Updated email address.
IvisionReader.java 10.2 KB 6495   10 years melissa Updated email address.
JEOLReader.java 5.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
JPEG2000Reader.java 5.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
JPEGReader.java 1.5 KB 4953   11 years melissa Switched licenses from GPL v3 or later to GPL v2 or later.
JPKReader.java 4.2 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
KhorosReader.java 5.2 KB 6392   10 years melissa Fixed LUT ordering bug. See  omero:2438.
L2DReader.java 11.0 KB 6457   10 years melissa Moved ome.xml.r201004.* to ome.xml.model.*.
LegacyND2Reader.java 6.7 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
LegacyQTReader.java 7.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
LeicaHandler.java 35.9 KB 6526   10 years melissa Fixed Detector indices so that Detectors are properly populated and linked …
LeicaReader.java 46.1 KB 6597   10 years melissa Better XZ/XT scan detection; see  omero:2321.
LEOReader.java 4.1 KB 6495   10 years melissa Updated email address.
LiFlimReader.java 17.3 KB 6370   10 years melissa Updated Deltavision and Flex readers to use …
LIFReader.java 11.6 KB 6534   10 years melissa Fixed a few issues with 16-bit LUTs.
LIMReader.java 3.9 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
loci_formats_in_LegacyND2Reader.cpp 10.6 KB 6026   10 years melissa Merging cleanup branch back into trunk.
loci_formats_in_LegacyND2Reader.h 5.1 KB 3498   12 years melissa Rewrote LegacyND2Reader to use our own native bindings.
MetadataLevel.java 1.3 KB 6074   10 years callan PIXELS_ONLY --> MINIMUM metadata level.
MetadataOptions.java 1.3 KB 6069   10 years callan A scaffold to support metadata configurability of readers.
MetamorphHandler.java 6.5 KB 6495   10 years melissa Updated email address.
MetamorphReader.java 43.9 KB 6527   10 years melissa Tweaked Metamorph reader's type detection so that TIFFs are not …
MetamorphTiffReader.java 5.3 KB 6495   10 years melissa Updated email address.
MIASReader.java 35.1 KB 6457   10 years melissa Moved ome.xml.r201004.* to ome.xml.model.*.
MicromanagerReader.java 17.1 KB 6501   10 years melissa Tweaked isThisType to only pick up valid TIFF files that are in the same …
MINCReader.java 5.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
MinimalTiffReader.java 10.9 KB 6495   10 years melissa Updated email address.
MNGReader.java 8.2 KB 6335   10 years melissa Moved SizeT population to prevent it from being 0. See  omero:2377.
MolecularImagingReader.java 5.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
MRCReader.java 6.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
MRWReader.java 7.4 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
NAFReader.java 5.8 KB 6495   10 years melissa Updated email address.
NativeND2Reader.java 44.7 KB 6457   10 years melissa Moved ome.xml.r201004.* to ome.xml.model.*.
NativeQTReader.java 19.4 KB 6495   10 years melissa Updated email address.
ND2Reader.java 1.8 KB 5517   11 years melissa Added two new methods to IFormatReader: boolean isSingleFile(String) …
NiftiReader.java 13.9 KB 6495   10 years melissa Updated email address.
NikonReader.java 14.3 KB 6495   10 years melissa Updated email address.
NikonTiffReader.java 9.9 KB 6457   10 years melissa Moved ome.xml.r201004.* to ome.xml.model.*.
NRRDReader.java 9.1 KB 6333   10 years melissa * Removed hopefully obsolete hack from RandomAccessInputStream.findString. …
OMETiffReader.java 21.5 KB 6494   10 years melissa Added support for multi-file OME-TIFF export. Closes #485.
OMEXMLReader.java 13.6 KB 6507   10 years melissa Couple of minor reader fixes.
OpenlabRawReader.java 5.9 KB 6495   10 years melissa Updated email address.
OpenlabReader.java 22.9 KB 6495   10 years melissa Updated email address.
OxfordInstrumentsReader.java 6.1 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
package.html 80 bytes 1351   14 years curtis Package descriptions for many packages.
PCIReader.java 11.4 KB 6495   10 years melissa Updated email address.
PCXReader.java 4.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
PerkinElmerReader.java 26.8 KB 6495   10 years melissa Updated email address.
PGMReader.java 5.4 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
PhotoshopTiffReader.java 8.8 KB 6495   10 years melissa Updated email address.
PictReader.java 18.8 KB 6334   10 years melissa * Prevent PICT reader from reporting width or height less than 0. * Fixd …
PrairieReader.java 13.6 KB 6376   10 years melissa Updated remaining readers to use enumeration handlers.
PSDReader.java 8.4 KB 6495   10 years melissa Updated email address.
QTReader.java 1.8 KB 5517   11 years melissa Added two new methods to IFormatReader: boolean isSingleFile(String) …
QuesantReader.java 5.4 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
RHKReader.java 6.1 KB 6487   10 years melissa Minor fixes to make metadata level tests pass.
SBIGReader.java 6.0 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ScanrReader.java 16.4 KB 6461   10 years melissa Fixed well ordering bug, courtesy of Rubén Muñoz.
SDTInfo.java 27.4 KB 5093   11 years curtis Fix a bunch of Eclipse warnings.
SDTReader.java 7.1 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
SeikoReader.java 3.5 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
SEQReader.java 5.3 KB 6495   10 years melissa Updated email address.
SlidebookReader.java 20.0 KB 6566   10 years melissa Tweaked pixel block detection to work with Slidebook 5.0.0.5 files.
SMCameraReader.java 3.7 KB 6487   10 years melissa Minor fixes to make metadata level tests pass.
SVSReader.java 5.0 KB 6406   10 years melissa Updated several TIFF-based readers to populate Image.Description more …
TargaReader.java 7.5 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
TCSReader.java 16.8 KB 6495   10 years melissa Updated email address.
TextReader.java 12.5 KB 6490   10 years melissa Added TextReader to 4.2 branch.
TiffDelegateReader.java 1.8 KB 6026   10 years melissa Merging cleanup branch back into trunk.
TiffJAIReader.java 6.2 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
TiffReader.java 12.3 KB 6495   10 years melissa Updated email address.
TillVisionReader.java 15.0 KB 6567   10 years melissa Fixed how pixels files are found, so that having multiple *.vws files in …
TopometrixReader.java 5.8 KB 6487   10 years melissa Minor fixes to make metadata level tests pass.
UBMReader.java 3.3 KB 6487   10 years melissa Minor fixes to make metadata level tests pass.
UnisokuReader.java 6.3 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
VGSAMReader.java 3.4 KB 6487   10 years melissa Minor fixes to make metadata level tests pass.
VisitechReader.java 9.6 KB 6553   10 years melissa Fixed a handful of core metadata and pixels offset bugs in Visitech …
WATOPReader.java 4.8 KB 6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
ZeissLSMReader.java 64.1 KB 6495   10 years melissa Updated email address.
ZeissZVIReader.java 55.5 KB 6495   10 years melissa Updated email address.
ZipReader.java 3.7 KB 6121   10 years melissa Preliminary support for reading Zip files with multiple entries. Closes …
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