source: branches/4.2/components/bio-formats/src/loci/formats/in @ 7270

Name Size Rev Age Author Last Change
../
AIMReader.java 5.4 KB 7265   9 years melissa Merged r7228 to 4.2.
AliconaReader.java 8.2 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
AmiraReader.java 14.7 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
AnalyzeReader.java 10.4 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
APLReader.java 11.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
APNGReader.java 8.6 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
ARFReader.java 5.0 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
AVIReader.java 19.5 KB 7261   9 years melissa Merged r7220 into 4.2.
BaseTiffReader.java 15.6 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
BDReader.java 19.5 KB 7122   9 years melissa Fixed TIFF file ordering problems.
BIFormatReader.java 3.1 KB 7266   9 years melissa Merged BufferedImage unpacking fixes into 4.2: r7236 and r7254.
BioRadGelReader.java 6.5 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
BioRadReader.java 39.3 KB 7097   9 years melissa Backported file stitching changes to 4.2: r7021, r7022, r7070, r7071, …
BMPReader.java 8.8 KB 7224   9 years melissa Fixed pixel offset bug.
BurleighReader.java 5.5 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
CellomicsReader.java 5.4 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
CellWorxReader.java 16.8 KB 7102   9 years melissa Backported r7055 to 4.2.
DefaultMetadataOptions.java 1.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
DeltavisionReader.java 35.5 KB 7158   9 years melissa Fixes for truncated .dv files from QA #2988 and #2989.
DicomReader.java 75.0 KB 7097   9 years melissa Backported file stitching changes to 4.2: r7021, r7022, r7070, r7071, …
Ecat7Reader.java 14.5 KB 6997   9 years melissa Merged new readers into 4.2: r6758, r6783, r6790, r6797, r6801, r6845.
EPSReader.java 8.6 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
FakeReader.java 14.9 KB 7270   9 years melissa Merged r7253 into 4.2.
FEIReader.java 4.6 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
FEITiffReader.java 7.7 KB 7259   9 years melissa Improved stage position parsing.
FitsReader.java 4.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
FlexReader.java 56.3 KB 7153   9 years melissa Only populate LightPath references if the LSIDs are not null.
FluoviewReader.java 23.0 KB 7127   9 years melissa A few more fixes for small bugs exposed during testing.
FV1000Reader.java 51.1 KB 7270   9 years melissa Merged r7253 into 4.2.
GatanDM2Reader.java 7.4 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
GatanReader.java 14.0 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
GelReader.java 6.6 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
GIFReader.java 13.5 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
HISReader.java 8.0 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
ICSReader.java 31.2 KB 7102   9 years melissa Backported r7055 to 4.2.
ImaconReader.java 6.7 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
ImageIOReader.java 3.9 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
ImarisHDFReader.java 13.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
ImarisReader.java 7.3 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
ImarisTiffReader.java 5.5 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
ImprovisionTiffReader.java 11.4 KB 7246   9 years melissa Fixed channel name population.
InCellReader.java 31.7 KB 7102   9 years melissa Backported r7055 to 4.2.
IPLabReader.java 12.3 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
IPWReader.java 9.3 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
IvisionReader.java 10.3 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
JEOLReader.java 5.4 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
JPEG2000Reader.java 5.0 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
JPEGReader.java 1.5 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
JPKReader.java 4.2 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
KhorosReader.java 5.2 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
L2DReader.java 11.7 KB 7097   9 years melissa Backported file stitching changes to 4.2: r7021, r7022, r7070, r7071, …
LegacyND2Reader.java 6.7 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
LegacyQTReader.java 7.0 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
LeicaHandler.java 38.7 KB 7156   9 years melissa Hackish fix for potential IndexOutOfBoundsException; the real fix should …
LeicaReader.java 48.3 KB 7125   9 years melissa Fixed a handful of little bugs exposed during testing.
LEOReader.java 4.4 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
LiFlimReader.java 17.5 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
LIFReader.java 13.2 KB 7270   9 years melissa Merged r7253 into 4.2.
LIMReader.java 3.9 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
loci_formats_in_LegacyND2Reader.cpp 10.6 KB 6026   10 years melissa Merging cleanup branch back into trunk.
loci_formats_in_LegacyND2Reader.h 5.1 KB 3498   12 years melissa Rewrote LegacyND2Reader to use our own native bindings.
MetadataLevel.java 1.3 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
MetadataOptions.java 1.3 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
MetamorphHandler.java 6.6 KB 7102   9 years melissa Backported r7055 to 4.2.
MetamorphReader.java 49.0 KB 7208   9 years melissa Backported r7207 to 4.2.
MetamorphTiffReader.java 5.3 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
MIASReader.java 37.0 KB 7140   9 years melissa Fixed an NPE and a few plane indexing bugs.
MicromanagerReader.java 17.0 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
MINCReader.java 7.7 KB 7053   9 years melissa Parse physical pixel sizes.
MinimalTiffReader.java 10.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
MNGReader.java 8.2 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
MolecularImagingReader.java 5.0 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
MRCReader.java 7.1 KB 7152   9 years melissa Allow .rec extension for MRC files. isThisType(RandomAccessInputStream) …
MRWReader.java 7.3 KB 7143   9 years melissa Fixed a handful of NPEs, AIOOBs, and leaking file handles.
NAFReader.java 5.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
NativeND2Reader.java 35.5 KB 7144   9 years melissa Finally fixed ND2 field index bug.
NativeQTReader.java 19.4 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
ND2Handler.java 20.9 KB 7124   9 years melissa Fixed scanline padding and various metadata parsing bugs.
ND2Reader.java 1.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
NiftiReader.java 13.9 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
NikonElementsTiffReader.java 7.9 KB 7008   9 years melissa Added missing files.
NikonReader.java 14.3 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
NikonTiffReader.java 10.1 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
NRRDReader.java 9.3 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
OMETiffReader.java 24.7 KB 7157   9 years melissa Remove any extra channels from OME-TIFF files. See  omero:#3250, QA #2973.
OMEXMLReader.java 12.5 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
OpenlabRawReader.java 5.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
OpenlabReader.java 23.1 KB 7102   9 years melissa Backported r7055 to 4.2.
OxfordInstrumentsReader.java 6.0 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
package.html 80 bytes 1351   14 years curtis Package descriptions for many packages.
PCIReader.java 11.5 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
PCXReader.java 5.5 KB 7019   9 years melissa Added support for RGB and indexed color images. Closes #567.
PDSReader.java 8.6 KB 7102   9 years melissa Backported r7055 to 4.2.
PerkinElmerReader.java 27.5 KB 7090   9 years melissa Override get*LookupTable() so that LUTs are returned where appropriate. …
PGMReader.java 5.4 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
PhotoshopTiffReader.java 8.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
PictReader.java 18.8 KB 7057   9 years melissa Fixed PICT sub-image reading, see  omero:#3037.
PrairieReader.java 17.8 KB 7102   9 years melissa Backported r7055 to 4.2.
PSDReader.java 8.4 KB 7141   9 years melissa * Backported r6227 to 4.1. * Fixed a subtle bug in calculating the pixel …
QTReader.java 1.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
QuesantReader.java 5.4 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
RHKReader.java 6.1 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
SBIGReader.java 6.0 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
ScanrReader.java 18.0 KB 6995   9 years melissa Merged recent ScanR changes: r6720, r6810, r6838, r6959, and r6967.
SDTInfo.java 27.2 KB 7149   9 years melissa A bunch of little export fixes.
SDTReader.java 7.0 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
SeikoReader.java 3.5 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
SEQReader.java 5.2 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
SimplePCITiffReader.java 7.5 KB 7006   9 years melissa Merged remaining reader changes: r6708, r6727, r6778, r6779, r6782, r6787, …
SlidebookReader.java 21.1 KB 7244   9 years melissa Fixed dimension adjustment for spool files.
SMCameraReader.java 3.6 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
SVSReader.java 5.0 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
TargaReader.java 7.5 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
TCSReader.java 17.5 KB 7140   9 years melissa Fixed an NPE and a few plane indexing bugs.
TextReader.java 13.0 KB 7083   9 years melissa Added better type detection to the text reader, see  omero:#2740.
TiffDelegateReader.java 1.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
TiffJAIReader.java 6.2 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
TiffReader.java 12.4 KB 7266   9 years melissa Merged BufferedImage unpacking fixes into 4.2: r7236 and r7254.
TillVisionReader.java 15.9 KB 7270   9 years melissa Merged r7253 into 4.2.
TopometrixReader.java 5.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
UBMReader.java 3.2 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
UnisokuReader.java 6.3 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
VarianFDFReader.java 9.6 KB 7102   9 years melissa Backported r7055 to 4.2.
VGSAMReader.java 3.4 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
VisitechReader.java 9.6 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
WATOPReader.java 4.8 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
ZeissLSMReader.java 72.1 KB 7260   9 years melissa * Skip over empty .lsm files instead of throwing an EOFException. * …
ZeissZVIReader.java 58.4 KB 7251   9 years melissa Catch IOException when parsing ROIs, so that we can still read the file if …
ZipReader.java 3.7 KB 7007   9 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
Note: See TracBrowser for help on using the repository browser.