source: trunk/loci/formats/readers.txt @ 3895

Revision 3895, 4.2 KB checked in by curtis, 12 years ago (diff)

Put NNRD reader before PIC reader, so NRRD reader has a chance to grab
PIC files that belong to one of its datasets (but it doesn't do so yet;
see ticket #273).

  • Property svn:eol-style set to native
  • Property svn:keywords set to Author Date Id Revision
Line 
1#
2# readers.txt
3#
4
5# LOCI Bio-Formats package for reading and converting biological file formats.
6# Copyright (C) 2005-@year@ Melissa Linkert, Curtis Rueden, Chris Allan,
7# Eric Kjellman and Brian Loranger.
8#
9# This program is free software; you can redistribute it and/or modify
10# it under the terms of the GNU Library General Public License as published by
11# the Free Software Foundation; either version 2 of the License, or
12# (at your option) any later version.
13#
14# This program is distributed in the hope that it will be useful,
15# but WITHOUT ANY WARRANTY; without even the implied warranty of
16# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
17# GNU Library General Public License for more details.
18#
19# You should have received a copy of the GNU Library General Public License
20# along with this program; if not, write to the Free Software
21# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
22
23# This document is a configuration file identifying all file format readers
24# available to Bio-Formats, and the order in which they should be used.
25# Please do not edit unless you know what you are doing (see reader-guide.txt).
26
27# javax.imageio readers
28loci.formats.in.PNGReader             # png [javax.imageio]
29loci.formats.in.JPEGReader            # jpg, jpeg [javax.imageio]
30
31# standalone readers with unique file extensions
32loci.formats.in.PGMReader             # pgm
33loci.formats.in.FitsReader            # fits
34loci.formats.in.PCXReader             # pcx
35loci.formats.in.GIFReader             # gif
36loci.formats.in.BMPReader             # bmp
37loci.formats.in.DicomReader           # dcm, dicom
38loci.formats.in.NRRDReader            # nrrd, nhdr
39loci.formats.in.BioRadReader          # pic
40loci.formats.in.IPLabReader           # ipl
41loci.formats.in.DeltavisionReader     # dv, r3d
42loci.formats.in.MRCReader             # mrc
43loci.formats.in.GatanReader           # dm3
44loci.formats.in.ImarisReader          # ims
45loci.formats.in.OpenlabRawReader      # raw
46loci.formats.in.OMEXMLReader          # ome
47loci.formats.in.LIFReader             # lif
48loci.formats.in.AVIReader             # avi
49loci.formats.in.QTReader              # mov
50loci.formats.in.PictReader            # pict, pct
51loci.formats.in.SDTReader             # sdt
52loci.formats.in.EPSReader             # eps, epsi
53loci.formats.in.SlidebookReader       # sld
54loci.formats.in.AliconaReader         # al3d
55loci.formats.in.MNGReader             # mng
56loci.formats.in.KhorosReader          # xv
57loci.formats.in.VisitechReader        # html, xys
58loci.formats.in.LIMReader             # lim
59loci.formats.in.PSDReader             # psd
60loci.formats.in.InCellReader          # xdce
61loci.formats.in.L2DReader             # l2d
62
63# multi-extension messes
64loci.formats.in.ICSReader             # ics, ids
65loci.formats.in.PerkinElmerReader     # rec, ano, csv, htm, tim, zpo, 2, 3, ...
66loci.formats.in.TCSReader             # xml, tif
67
68# readers requiring third-party libraries
69loci.formats.in.FV1000Reader          # oib, oif, various
70loci.formats.in.ZeissZVIReader        # zvi [POIFS]
71loci.formats.in.IPWReader             # ipw [POIFS]
72loci.formats.in.ND2Reader             # nd2, jp2 [JAI-ImageIO]
73loci.formats.in.PCIReader             # cxd [POIFS]
74loci.formats.in.ImarisHDFReader       # ims
75
76# TIFF-based readers with unique file extensions
77loci.formats.in.MetamorphReader       # stk
78loci.formats.in.ZeissLSMReader        # lsm
79loci.formats.in.SEQReader             # seq
80loci.formats.in.GelReader             # gel
81loci.formats.in.ImarisTiffReader      # ims
82loci.formats.in.FlexReader            # flex
83loci.formats.in.SVSReader             # svs
84
85# TIFF-based readers with slow isThisType
86loci.formats.in.LeicaReader           # lei, tif
87loci.formats.in.NikonReader           # nef, tif
88loci.formats.in.FluoviewReader        # tif
89loci.formats.in.PrairieReader         # xml, cfg, tif
90loci.formats.in.MicromanagerReader    # txt, tif
91loci.formats.in.ImprovisionTiffReader # tif
92loci.formats.in.MetamorphTiffReader   # tif
93loci.formats.in.OMETiffReader         # tif
94
95# standard TIFF reader must go last (it accepts any TIFF)
96loci.formats.in.TiffReader            # tif, tiff
97
98# non-TIFF readers with slow isThisType
99loci.formats.in.OpenlabReader         # liff
Note: See TracBrowser for help on using the repository browser.