source: trunk/projects/misc-plugins/src/main/resources/plugins.config @ 7739

Revision 7739, 1.8 KB checked in by curtis, 8 years ago (diff)

First version of OME-TIFF stitching plugin.

Calls Bio-Formats to get stage position and filename information,
generates a tile configuration file indicating the approximate tile
layout, then calls Fiji's "Stitch Collection of Images" plugin to
perform the stitching.

Line 
1#
2# plugins.config
3#
4
5# Miscellaneous ImageJ plugins.
6#
7# Copyright (c) 2010, UW-Madison LOCI
8# All rights reserved.
9#
10# Redistribution and use in source and binary forms, with or without
11# modification, are permitted provided that the following conditions are met:
12#     * Redistributions of source code must retain the above copyright
13#       notice, this list of conditions and the following disclaimer.
14#     * Redistributions in binary form must reproduce the above copyright
15#       notice, this list of conditions and the following disclaimer in the
16#       documentation and/or other materials provided with the distribution.
17#     * Neither the name of the UW-Madison LOCI nor the
18#       names of its contributors may be used to endorse or promote products
19#       derived from this software without specific prior written permission.
20#
21# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
22# AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
23# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
24# ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
25# LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
26# CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
27# SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
28# INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
29# CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
30# ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
31# POSSIBILITY OF SUCH DAMAGE.
32
33Plugins>LOCI, "Export as Text", loci.plugins.ExportAsText("")
34Plugins>LOCI, "ROI Map", loci.plugins.RoiMap("")
35
36Plugins>Stitching, "Stitch OME-TIFFs", loci.plugins.StitchOmeTiff("")
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