Changeset 4257


Ignore:
Timestamp:
07/25/08 14:26:05 (12 years ago)
Author:
melissa
Message:

Updated all metadata support docs to indicate that LogicalChannel.SamplesPerPixel is supported (by all readers). Updated MetadataTools.populatePixels method to populate LogicalChannel.SamplesPerPixel.

Location:
trunk/loci/formats
Files:
61 edited

Legend:

Unmodified
Added
Removed
  • trunk/loci/formats/MetadataTools.java

    r4132 r4257  
    236236      store.setPixelsBigEndian(new Boolean(!r.isLittleEndian()), i, 0); 
    237237      store.setPixelsDimensionOrder(r.getDimensionOrder(), i, 0); 
     238      Integer sampleCount = new Integer(r.getRGBChannelCount()); 
     239      for (int c=0; c<r.getEffectiveSizeC(); c++) { 
     240        store.setLogicalChannelSamplesPerPixel(sampleCount, i, c); 
     241      } 
    238242    } 
    239243    r.setSeries(oldSeries); 
  • trunk/loci/formats/auto/meta-support.txt

    r4254 r4257  
    5151Dimensions.PhysicalSizeY = Yes 
    5252Image.Name = Yes 
     53LogicalChannel.SamplesPerPixel = Yes 
    5354 
    5455[APNGReader] 
    5556Pixels = Yes since r647 
     57LogicalChannel.SamplesPerPixel = Yes 
    5658 
    5759[AVIReader] 
    5860Pixels = Yes since r657 
    59 LogicalChannel = No 
     61LogicalChannel.SamplesPerPixel = Yes 
    6062 
    6163[AliconaReader] 
     
    6668Dimensions.PhysicalSizeX = Yes 
    6769Dimensions.PhysicalSizeY = Yes 
     70LogicalChannel.SamplesPerPixel = Yes 
    6871 
    6972[BMPReader] 
     
    7174Dimensions.PhysicalSizeX = Yes 
    7275Dimensions.PhysicalSizeY = Yes 
    73 LogicalChannel = No 
     76LogicalChannel.SamplesPerPixel = Yes 
    7477 
    7578[BioRadReader] 
     
    8083DetectorSettings = No 
    8184LogicalChannel = No 
     85LogicalChannel.SamplesPerPixel = Yes 
    8286DisplayChannel = No 
    8387DisplayOptions = No 
     
    96100LogicalChannel.ExWave = Yes 
    97101LogicalChannel.NdFilter = Yes 
     102LogicalChannel.SamplesPerPixel = Yes 
    98103 
    99104[DicomReader] 
     
    102107Image.Description = Yes 
    103108LogicalChannel = No 
     109LogicalChannel.SamplesPerPixel = Yes 
    104110 
    105111[EPSReader] 
    106112Pixels = Yes since r994 
     113LogicalChannel.SamplesPerPixel = Yes 
    107114 
    108115[FEIReader] 
    109116Pixels = Yes since r4057 
     117LogicalChannel.SamplesPerPixel = Yes 
    110118 
    111119[FV1000Reader] 
     
    117125Detector = No 
    118126DetectorSettings = No 
     127LogicalChannel.SamplesPerPixel = Yes 
    119128 
    120129[FitsReader] 
    121130Pixels = Yes since r2595 
     131LogicalChannel.SamplesPerPixel = Yes 
    122132 
    123133[FlexReader] 
     
    136146Well.Column = Yes 
    137147Experimenter = Yes 
     148LogicalChannel.SamplesPerPixel = Yes 
    138149 
    139150[FluoviewReader] 
     
    141152Dimensions = Yes 
    142153LogicalChannel.Name = Yes 
     154LogicalChannel.SamplesPerPixel = Yes 
    143155Objective.LensNA = Yes 
    144156Objective.Manufacturer = No 
     
    151163[GIFReader] 
    152164Pixels = Yes since r647 
    153 LogicalChannel = No 
     165LogicalChannel.SamplesPerPixel = Yes 
    154166 
    155167[GatanReader] 
     
    161173Objective.CalibratedMagnification = No 
    162174Detector.Voltage = No 
     175LogicalChannel.SamplesPerPixel = Yes 
    163176 
    164177[GelReader] 
     
    169182Dimensions.PhysicalSizeY = Yes 
    170183Experimenter = Yes 
     184LogicalChannel.SamplesPerPixel = Yes 
    171185 
    172186[ICSReader] 
     
    174188Dimensions = Yes 
    175189LogicalChannel = No 
     190LogicalChannel.SamplesPerPixel = Yes 
    176191 
    177192[IPLabReader] 
     
    181196Image.Description = Yes 
    182197ROI = No 
     198LogicalChannel.SamplesPerPixel = Yes 
    183199 
    184200[IPWReader] 
     
    186202Image.Description = Yes 
    187203Image.CreationDate = Yes 
     204LogicalChannel.SamplesPerPixel = Yes 
    188205 
    189206[ImarisHDFReader] 
     
    194211Image.Name = Yes 
    195212LogicalChannel = No 
     213LogicalChannel.SamplesPerPixel = Yes 
    196214DetectorSettings.Gain = No 
    197215 
     
    200218Dimensions = Yes 
    201219LogicalChannel.PinholeSize = Yes 
     220LogicalChannel.SamplesPerPixel = Yes 
    202221DetectorSettings = No 
    203222Objective.CalibratedMagnification = No 
     
    210229LogicalChannel.ExWave = Yes 
    211230LogicalChannel.Name = Yes 
     231LogicalChannel.SamplesPerPixel = Yes 
    212232Experimenter = Yes 
    213233Dimensions.PhysicalSizeX = Yes 
     
    221241Dimensions.TimeIncrement = Yes 
    222242Experimenter = Yes 
     243LogicalChannel.SamplesPerPixel = Yes 
    223244 
    224245[InCellReader] 
     
    231252LogicalChannel.EmWave = Yes 
    232253LogicalChannel.ExWave = Yes 
     254LogicalChannel.SamplesPerPixel = Yes 
    233255 
    234256[JPEGReader] 
    235257Pixels = Yes since r647 
     258LogicalChannel.SamplesPerPixel = Yes 
    236259 
    237260[KhorosReader] 
    238261Pixels = Yes since r2831 
     262LogicalChannel.SamplesPerPixel = Yes 
    239263 
    240264[L2DReader] 
    241265Pixels = Yes since r3763 
     266LogicalChannel.SamplesPerPixel = Yes 
    242267 
    243268[LIFReader] 
     
    247272Dimensions.PhysicalSizeY = Yes 
    248273Dimensions.PhysicalSizeZ = Yes 
     274LogicalChannel.SamplesPerPixel = Yes 
    249275 
    250276[LIMReader] 
    251277Pixels = Yes since r3198 
     278LogicalChannel.SamplesPerPixel = Yes 
    252279 
    253280[LeicaReader] 
    254281Pixels = Yes since r639 
    255282Image = Yes 
     283LogicalChannel.SamplesPerPixel = Yes 
    256284 
    257285[MINCReader] 
    258286Pixels = Yes 
    259287Image.Description = Yes 
     288LogicalChannel.SamplesPerPixel = Yes 
    260289 
    261290[MNGReader] 
    262291Pixels = Yes since r1844 
    263292Image.Name = Yes 
     293LogicalChannel.SamplesPerPixel = Yes 
    264294 
    265295[MRCReader] 
     
    268298Dimensions.PhysicalSizeY = Yes 
    269299Dimensions.PhysicalSizeZ = Yes 
     300LogicalChannel.SamplesPerPixel = Yes 
    270301 
    271302[MetamorphReader] 
     
    274305Dimensions.PhysicalSizeX = Yes 
    275306Dimensions.PhysicalSizeY = Yes 
     307LogicalChannel.SamplesPerPixel = Yes 
    276308 
    277309[MetamorphTiffReader] 
     
    285317Plane = Yes since r4254 
    286318PlaneTiming = Yes since r4254 
     319LogicalChannel.SamplesPerPixel = Yes 
    287320 
    288321[MicromanagerReader] 
    289322Pixels = Yes since r2384 
     323LogicalChannel.SamplesPerPixel = Yes 
    290324 
    291325[NAFReader] 
    292326Pixels = Yes since r4059 
     327LogicalChannel.SamplesPerPixel = Yes 
    293328 
    294329[ND2Reader] 
     
    301336Dimensions.PhysicalSizeZ = Yes 
    302337LogicalChannel = No 
     338LogicalChannel.SamplesPerPixel = Yes 
    303339DetectorSettings.Gain = No 
    304340Detector.Voltage = No 
     
    311347Dimensions.PhysicalSizeY = Yes 
    312348Dimensions.PhysicalSizeZ = Yes 
     349LogicalChannel.SamplesPerPixel = Yes 
    313350 
    314351[NikonReader] 
     
    317354Dimensions.PhysicalSizeX = Yes 
    318355Dimensions.PhysicalSizeY = Yes 
     356LogicalChannel.SamplesPerPixel = Yes 
    319357 
    320358[OMETiffReader] 
     
    391429Pixels = Yes since r879 
    392430Image.CreationDate = Yes 
     431LogicalChannel.SamplesPerPixel = Yes 
    393432 
    394433[OpenlabReader] 
     
    401440Dimensions.PhysicalSizeX = Yes 
    402441Dimensions.PhysicalSizeY = Yes 
     442LogicalChannel.SamplesPerPixel = Yes 
    403443 
    404444[PCIReader] 
     
    406446Dimensions.PhysicalSizeX = Yes 
    407447Dimensions.PhysicalSizeY = Yes 
     448LogicalChannel.SamplesPerPixel = Yes 
    408449 
    409450[PCXReader] 
    410451Pixels = Yes since r3727 
     452LogicalChannel.SamplesPerPixel = Yes 
    411453 
    412454[PGMReader] 
    413455Pixels = Yes since r2595 
     456LogicalChannel.SamplesPerPixel = Yes 
    414457 
    415458[PSDReader] 
    416459Pixels = Yes since r3202 
     460LogicalChannel.SamplesPerPixel = Yes 
    417461 
    418462[PerkinElmerReader] 
     
    423467LogicalChannel.EmWave = Yes 
    424468LogicalChannel.ExWave = Yes 
     469LogicalChannel.SamplesPerPixel = Yes 
    425470Plane = Yes 
    426471PlaneTiming = Yes 
     
    430475[PictReader] 
    431476Pixels = Yes since r764 
     477LogicalChannel.SamplesPerPixel = Yes 
    432478 
    433479[PrairieReader] 
     
    438484Image.CreationDate = Yes 
    439485Laser.Power = No 
     486LogicalChannel.SamplesPerPixel = Yes 
    440487 
    441488[QTReader] 
    442489Pixels = Yes since r658 
     490LogicalChannel.SamplesPerPixel = Yes 
    443491 
    444492[SDTReader] 
    445493Pixels = Yes since r958 
     494LogicalChannel.SamplesPerPixel = Yes 
    446495 
    447496[SEQReader] 
     
    450499Dimensions.PhysicalSizeX = Yes 
    451500Dimensions.PhysicalSizeY = Yes 
     501LogicalChannel.SamplesPerPixel = Yes 
    452502 
    453503[SVSReader] 
     
    457507Dimensions.PhysicalSizeX = Yes 
    458508Dimensions.PhysicalSizeY = Yes 
     509LogicalChannel.SamplesPerPixel = Yes 
    459510 
    460511[SlidebookReader] 
     
    462513Image.Name = Yes 
    463514LogicalChannel.Name = Yes 
     515LogicalChannel.SamplesPerPixel = Yes 
    464516 
    465517[TCSReader] 
     
    470522Dimensions.PhysicalSizeZ = Yes 
    471523Experimenter = Yes 
     524LogicalChannel.SamplesPerPixel = Yes 
    472525 
    473526[TiffReader] 
     
    476529Dimensions.PhysicalSizeX = Yes 
    477530Dimensions.PhysicalSizeY = Yes 
     531LogicalChannel.SamplesPerPixel = Yes 
    478532 
    479533[TillVisionReader] 
    480534Pixels = Yes 
     535LogicalChannel.SamplesPerPixel = Yes 
    481536 
    482537[VisitechReader] 
    483538Pixels = Yes since r2925 
    484539Image.Name = Yes 
     540LogicalChannel.SamplesPerPixel = Yes 
    485541 
    486542[ZeissLSMReader] 
  • trunk/loci/formats/doc/meta/APLReader.txt

    r4251 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 12 of them (7%). 
    13   * Of those, Bio-Formats fully or partially converts 12 (100%). 
     12  * The file format itself supports 13 of them (8%). 
     13  * Of those, Bio-Formats fully or partially converts 13 (100%). 
    1414 
    1515== Supported fields == 
     
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeY 
    2020  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
     21  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian 
    2223  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder 
     
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY 
    2930  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ 
    30 === Total supported: 12 === 
     31=== Total supported: 13 === 
    3132 
    3233== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 139 === 
     175=== Total unknown or missing: 138 === 
  • trunk/loci/formats/doc/meta/APNGReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Animated PNG format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r647 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r647 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r647 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r647 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/AVIReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 22 of them (14%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (40%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Audio Video Interleave format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r657 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r657 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r657 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r657 
    27 === Total supported: 9 === 
    28  
    29 == Unsupported fields == 
    30 For one reason or another, the 
    31 Bio-Formats Audio Video Interleave format reader 
    32 does not support these fields: 
    33   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ContrastMethod 
    34   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: EmWave 
    35   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ExWave 
    36   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Fluor 
    37   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ID 
    38   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: IlluminationType 
    39   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Mode 
    40   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Name 
    41   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: NdFilter 
    42   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PhotometricInterpretation 
    43   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    44   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    45   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    46 === Total unsupported: 13 === 
     28=== Total supported: 10 === 
    4729 
    4830== Unknown or missing fields == 
     
    10688  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LightSourceRef LightSourceSettings]: LightSource 
    10789  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LightSourceRef LightSourceSettings]: Wavelength 
     90  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ContrastMethod 
     91  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: EmWave 
     92  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ExWave 
     93  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Fluor 
     94  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ID 
     95  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: IlluminationType 
     96  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Mode 
     97  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Name 
     98  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: NdFilter 
     99  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PhotometricInterpretation 
     100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
     101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    108102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    109103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 129 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/AliconaReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 14 of them (9%). 
    13   * Of those, Bio-Formats fully or partially converts 11 (78%). 
     12  * The file format itself supports 15 of them (9%). 
     13  * Of those, Bio-Formats fully or partially converts 12 (80%). 
    1414 
    1515== Supported fields == 
     
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeX 
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeY 
     20  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r1645 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r1645 
     
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r1645 
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r1645 
    29 === Total supported: 11 === 
     30=== Total supported: 12 === 
    3031 
    3132== Unsupported fields == 
     
    107108  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    108109  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    109   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    110110  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    111111  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179179  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180180  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 137 === 
     181=== Total unknown or missing: 136 === 
  • trunk/loci/formats/doc/meta/BMPReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 24 of them (15%). 
    13   * Of those, Bio-Formats fully or partially converts 11 (45%). 
     12  * The file format itself supports 12 of them (7%). 
     13  * Of those, Bio-Formats fully or partially converts 12 (100%). 
    1414 
    1515== Supported fields == 
     
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeX 
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeY 
     20  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r698 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r698 
     
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r698 
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r698 
    29 === Total supported: 11 === 
    30  
    31 == Unsupported fields == 
    32 For one reason or another, the 
    33 Bio-Formats Windows Bitmap format reader 
    34 does not support these fields: 
    35   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ContrastMethod 
    36   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: EmWave 
    37   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ExWave 
    38   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Fluor 
    39   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ID 
    40   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: IlluminationType 
    41   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Mode 
    42   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Name 
    43   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: NdFilter 
    44   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PhotometricInterpretation 
    45   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    46   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    47   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    48 === Total unsupported: 13 === 
     30=== Total supported: 12 === 
    4931 
    5032== Unknown or missing fields == 
     
    10688  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LightSourceRef LightSourceSettings]: LightSource 
    10789  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LightSourceRef LightSourceSettings]: Wavelength 
     90  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ContrastMethod 
     91  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: EmWave 
     92  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ExWave 
     93  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Fluor 
     94  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ID 
     95  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: IlluminationType 
     96  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Mode 
     97  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Name 
     98  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: NdFilter 
     99  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PhotometricInterpretation 
     100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
     101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    108102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    109103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 127 === 
     175=== Total unknown or missing: 139 === 
  • trunk/loci/formats/doc/meta/BioRadReader.txt

    r4199 r4257  
    1111Of the 151 fields documented below: 
    1212  * The file format itself supports 31 of them (20%). 
    13   * Of those, Bio-Formats fully or partially converts 12 (38%). 
     13  * Of those, Bio-Formats fully or partially converts 13 (41%). 
    1414 
    1515== Supported fields == 
     
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeY 
    2020  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeZ 
     21  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r631 
    2223  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r631 
     
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r631 
    2930  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r631 
    30 === Total supported: 12 === 
     31=== Total supported: 13 === 
    3132 
    3233== Unsupported fields == 
     
    5152  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    5253  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    53   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    5454  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Objective Objective]: CalibratedMagnification 
    55 === Total unsupported: 19 === 
     55=== Total unsupported: 18 === 
    5656 
    5757== Unknown or missing fields == 
  • trunk/loci/formats/doc/meta/DeltavisionReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 24 of them (15%). 
    13   * Of those, Bio-Formats fully or partially converts 24 (100%). 
     12  * The file format itself supports 25 of them (16%). 
     13  * Of those, Bio-Formats fully or partially converts 25 (100%). 
    1414 
    1515== Supported fields == 
     
    2323  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ExWave 
    2424  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: NdFilter 
     25  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r638 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r638 
     
    4041  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_StagePosition StagePosition]: PositionY 
    4142  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_StagePosition StagePosition]: PositionZ 
    42 === Total supported: 24 === 
     43=== Total supported: 25 === 
    4344 
    4445== Unknown or missing fields == 
     
    107108  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    108109  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    109   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    110110  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    111111  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 127 === 
     175=== Total unknown or missing: 126 === 
  • trunk/loci/formats/doc/meta/DicomReader.txt

    r4199 r4257  
    1111Of the 151 fields documented below: 
    1212  * The file format itself supports 24 of them (15%). 
    13   * Of those, Bio-Formats fully or partially converts 11 (45%). 
     13  * Of those, Bio-Formats fully or partially converts 12 (50%). 
    1414 
    1515== Supported fields == 
     
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: CreationDate 
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Description 
     20  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r920 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r920 
     
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r920 
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r920 
    29 === Total supported: 11 === 
     30=== Total supported: 12 === 
    3031 
    3132== Unsupported fields == 
     
    4546  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    4647  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    47   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    48 === Total unsupported: 13 === 
     48=== Total unsupported: 12 === 
    4949 
    5050== Unknown or missing fields == 
  • trunk/loci/formats/doc/meta/EPSReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Encapsulated PostScript format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r994 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r994 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r994 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r994 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/FEIReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats FEI format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r4057 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r4057 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r4057 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r4057 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/FV1000Reader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 24 of them (15%). 
    13   * Of those, Bio-Formats fully or partially converts 13 (54%). 
     12  * The file format itself supports 25 of them (16%). 
     13  * Of those, Bio-Formats fully or partially converts 14 (56%). 
    1414 
    1515== Supported fields == 
     
    2020  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeZ 
    2121  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: TimeIncrement 
     22  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2223  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r871 
    2324  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r871 
     
    2930  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r871 
    3031  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r871 
    31 === Total supported: 13 === 
     32=== Total supported: 14 === 
    3233 
    3334== Unsupported fields == 
     
    105106  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    106107  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    107   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    108108  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    109109  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179179  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180180  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 127 === 
     181=== Total unknown or missing: 126 === 
  • trunk/loci/formats/doc/meta/FitsReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Flexible Image Transport System format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r2595 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r2595 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r2595 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r2595 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/FlexReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 26 of them (17%). 
    13   * Of those, Bio-Formats fully or partially converts 26 (100%). 
     12  * The file format itself supports 27 of them (17%). 
     13  * Of those, Bio-Formats fully or partially converts 27 (100%). 
    1414 
    1515== Supported fields == 
     
    2727  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
    2828  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Laser Laser]: Wavelength 
     29  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2930  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Objective Objective]: CalibratedMagnification 
    3031  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Objective Objective]: Immersion 
     
    4243  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Well Well]: Column 
    4344  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Well Well]: Row 
    44 === Total supported: 26 === 
     45=== Total supported: 27 === 
    4546 
    4647== Unknown or missing fields == 
     
    105106  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    106107  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    107   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    108108  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    109109  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 125 === 
     175=== Total unknown or missing: 124 === 
  • trunk/loci/formats/doc/meta/FluoviewReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 35 of them (23%). 
    13   * Of those, Bio-Formats fully or partially converts 22 (62%). 
     12  * The file format itself supports 36 of them (23%). 
     13  * Of those, Bio-Formats fully or partially converts 23 (63%). 
    1414 
    1515== Supported fields == 
     
    2828  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: LastName 
    2929  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Name 
     30  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    3031  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Objective Objective]: LensNA 
    3132  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r639 
     
    3839  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r639 
    3940  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r639 
    40 === Total supported: 22 === 
     41=== Total supported: 23 === 
    4142 
    4243== Unsupported fields == 
     
    108109  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    109110  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    110   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    111111  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    112112  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179179  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180180  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 116 === 
     181=== Total unknown or missing: 115 === 
  • trunk/loci/formats/doc/meta/GIFReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 22 of them (14%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (40%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Graphics Interchange Format format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r647 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r647 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r647 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r647 
    27 === Total supported: 9 === 
    28  
    29 == Unsupported fields == 
    30 For one reason or another, the 
    31 Bio-Formats Graphics Interchange Format format reader 
    32 does not support these fields: 
    33   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ContrastMethod 
    34   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: EmWave 
    35   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ExWave 
    36   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Fluor 
    37   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ID 
    38   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: IlluminationType 
    39   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Mode 
    40   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Name 
    41   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: NdFilter 
    42   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PhotometricInterpretation 
    43   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    44   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    45   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    46 === Total unsupported: 13 === 
     28=== Total supported: 10 === 
    4729 
    4830== Unknown or missing fields == 
     
    10688  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LightSourceRef LightSourceSettings]: LightSource 
    10789  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LightSourceRef LightSourceSettings]: Wavelength 
     90  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ContrastMethod 
     91  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: EmWave 
     92  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ExWave 
     93  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Fluor 
     94  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ID 
     95  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: IlluminationType 
     96  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Mode 
     97  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Name 
     98  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: NdFilter 
     99  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PhotometricInterpretation 
     100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
     101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    108102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    109103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 129 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/GatanReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 14 of them (9%). 
    13   * Of those, Bio-Formats fully or partially converts 12 (85%). 
     12  * The file format itself supports 15 of them (9%). 
     13  * Of those, Bio-Formats fully or partially converts 13 (86%). 
    1414 
    1515== Supported fields == 
     
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeY 
    2020  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeZ 
     21  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r646 
    2223  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r646 
     
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r646 
    2930  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r646 
    30 === Total supported: 12 === 
     31=== Total supported: 13 === 
    3132 
    3233== Unsupported fields == 
     
    106107  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    107108  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    108   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    109109  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    110110  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179179  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180180  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 137 === 
     181=== Total unknown or missing: 136 === 
  • trunk/loci/formats/doc/meta/GelReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 18 of them (11%). 
    13   * Of those, Bio-Formats fully or partially converts 18 (100%). 
     12  * The file format itself supports 19 of them (12%). 
     13  * Of those, Bio-Formats fully or partially converts 19 (100%). 
    1414 
    1515== Supported fields == 
     
    2525  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: CreationDate 
    2626  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Description 
     27  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r879 
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r879 
     
    3435  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r879 
    3536  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r879 
    36 === Total supported: 18 === 
     37=== Total supported: 19 === 
    3738 
    3839== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 133 === 
     175=== Total unknown or missing: 132 === 
  • trunk/loci/formats/doc/meta/ICSReader.txt

    r4199 r4257  
    1111Of the 151 fields documented below: 
    1212  * The file format itself supports 28 of them (18%). 
    13   * Of those, Bio-Formats fully or partially converts 15 (53%). 
     13  * Of those, Bio-Formats fully or partially converts 16 (57%). 
    1414 
    1515== Supported fields == 
     
    2222  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: WaveIncrement 
    2323  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: WaveStart 
     24  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2425  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r629 
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r629 
     
    3132  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r629 
    3233  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r629 
    33 === Total supported: 15 === 
     34=== Total supported: 16 === 
    3435 
    3536== Unsupported fields == 
     
    4950  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    5051  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    51   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    52 === Total unsupported: 13 === 
     52=== Total unsupported: 12 === 
    5353 
    5454== Unknown or missing fields == 
  • trunk/loci/formats/doc/meta/IPLabReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 20 of them (13%). 
    13   * Of those, Bio-Formats fully or partially converts 11 (55%). 
     12  * The file format itself supports 21 of them (13%). 
     13  * Of those, Bio-Formats fully or partially converts 12 (57%). 
    1414 
    1515== Supported fields == 
     
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeX 
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Description 
     20  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r609 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r609 
     
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r609 
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r609 
    29 === Total supported: 11 === 
     30=== Total supported: 12 === 
    3031 
    3132== Unsupported fields == 
     
    114115  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    115116  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    116   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    117117  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    118118  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179179  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180180  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 131 === 
     181=== Total unknown or missing: 130 === 
  • trunk/loci/formats/doc/meta/IPWReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 11 of them (7%). 
    13   * Of those, Bio-Formats fully or partially converts 11 (100%). 
     12  * The file format itself supports 12 of them (7%). 
     13  * Of those, Bio-Formats fully or partially converts 12 (100%). 
    1414 
    1515== Supported fields == 
     
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: CreationDate 
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Description 
     20  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r646 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r646 
     
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r646 
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r646 
    29 === Total supported: 11 === 
     30=== Total supported: 12 === 
    3031 
    3132== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 140 === 
     175=== Total unknown or missing: 139 === 
  • trunk/loci/formats/doc/meta/ImarisHDFReader.txt

    r4199 r4257  
    1111Of the 151 fields documented below: 
    1212  * The file format itself supports 27 of them (17%). 
    13   * Of those, Bio-Formats fully or partially converts 13 (48%). 
     13  * Of those, Bio-Formats fully or partially converts 14 (51%). 
    1414 
    1515== Supported fields == 
     
    2020  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeZ 
    2121  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
     22  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2223  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r3309 
    2324  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r3309 
     
    2930  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r3309 
    3031  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r3309 
    31 === Total supported: 13 === 
     32=== Total supported: 14 === 
    3233 
    3334== Unsupported fields == 
     
    4849  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    4950  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    50   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    51 === Total unsupported: 14 === 
     51=== Total unsupported: 13 === 
    5252 
    5353== Unknown or missing fields == 
  • trunk/loci/formats/doc/meta/ImarisReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 20 of them (13%). 
    13   * Of those, Bio-Formats fully or partially converts 16 (80%). 
     12  * The file format itself supports 21 of them (13%). 
     13  * Of those, Bio-Formats fully or partially converts 17 (80%). 
    1414 
    1515== Supported fields == 
     
    2323  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: WaveStart 
    2424  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
     25  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r879 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r879 
     
    3233  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r879 
    3334  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r879 
    34 === Total supported: 16 === 
     35=== Total supported: 17 === 
    3536 
    3637== Unsupported fields == 
     
    106107  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PhotometricInterpretation 
    107108  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    108   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    109109  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    110110  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179179  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180180  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 131 === 
     181=== Total unknown or missing: 130 === 
  • trunk/loci/formats/doc/meta/ImarisTiffReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 21 of them (13%). 
    13   * Of those, Bio-Formats fully or partially converts 21 (100%). 
     12  * The file format itself supports 22 of them (14%). 
     13  * Of those, Bio-Formats fully or partially converts 22 (100%). 
    1414 
    1515== Supported fields == 
     
    2828  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ExWave 
    2929  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Name 
     30  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    3031  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r1712 
    3132  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r1712 
     
    3738  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r1712 
    3839  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r1712 
    39 === Total supported: 21 === 
     40=== Total supported: 22 === 
    4041 
    4142== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 130 === 
     175=== Total unknown or missing: 129 === 
  • trunk/loci/formats/doc/meta/ImprovisionTiffReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 18 of them (11%). 
    13   * Of those, Bio-Formats fully or partially converts 18 (100%). 
     12  * The file format itself supports 19 of them (12%). 
     13  * Of those, Bio-Formats fully or partially converts 19 (100%). 
    1414 
    1515== Supported fields == 
     
    2525  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: Institution 
    2626  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: LastName 
     27  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r2937 
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r2937 
     
    3435  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r2937 
    3536  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r2937 
    36 === Total supported: 18 === 
     37=== Total supported: 19 === 
    3738 
    3839== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 133 === 
     175=== Total unknown or missing: 132 === 
  • trunk/loci/formats/doc/meta/InCellReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 19 of them (12%). 
    13   * Of those, Bio-Formats fully or partially converts 19 (100%). 
     12  * The file format itself supports 20 of them (13%). 
     13  * Of those, Bio-Formats fully or partially converts 20 (100%). 
    1414 
    1515== Supported fields == 
     
    2020  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: EmWave 
    2121  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ExWave 
     22  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2223  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r3414 
    2324  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r3414 
     
    3536  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_PlaneTiming PlaneTiming]: ExposureTime 
    3637  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Index 
    37 === Total supported: 19 === 
     38=== Total supported: 20 === 
    3839 
    3940== Unknown or missing fields == 
     
    105106  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    106107  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    107   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    108108  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    109109  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 132 === 
     175=== Total unknown or missing: 131 === 
  • trunk/loci/formats/doc/meta/JPEGReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats JPEG format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r647 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r647 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r647 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r647 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/KhorosReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Khoros XV format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r2831 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r2831 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r2831 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r2831 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/L2DReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Li-Cor L2D format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r3763 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r3763 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r3763 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r3763 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/LIFReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 13 of them (8%). 
    13   * Of those, Bio-Formats fully or partially converts 13 (100%). 
     12  * The file format itself supports 14 of them (9%). 
     13  * Of those, Bio-Formats fully or partially converts 14 (100%). 
    1414 
    1515== Supported fields == 
     
    2020  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeZ 
    2121  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
     22  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2223  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r867 
    2324  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r867 
     
    2930  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r867 
    3031  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r867 
    31 === Total supported: 13 === 
     32=== Total supported: 14 === 
    3233 
    3334== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 138 === 
     175=== Total unknown or missing: 137 === 
  • trunk/loci/formats/doc/meta/LIMReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Laboratory Imaging format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r3198 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r3198 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r3198 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r3198 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/LeicaReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 14 of them (9%). 
    13   * Of those, Bio-Formats fully or partially converts 14 (100%). 
     12  * The file format itself supports 15 of them (9%). 
     13  * Of those, Bio-Formats fully or partially converts 15 (100%). 
    1414 
    1515== Supported fields == 
     
    2121  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: InstrumentRef 
    2222  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
     23  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2324  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r639 
    2425  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r639 
     
    3031  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r639 
    3132  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r639 
    32 === Total supported: 14 === 
     33=== Total supported: 15 === 
    3334 
    3435== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 137 === 
     175=== Total unknown or missing: 136 === 
  • trunk/loci/formats/doc/meta/MINCReader.txt

    r4251 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 10 of them (6%). 
    13   * Of those, Bio-Formats fully or partially converts 10 (100%). 
     12  * The file format itself supports 11 of them (7%). 
     13  * Of those, Bio-Formats fully or partially converts 11 (100%). 
    1414 
    1515== Supported fields == 
     
    1717Bio-Formats MINC MRI format reader: 
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Description 
     19  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder 
     
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY 
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ 
    28 === Total supported: 10 === 
     29=== Total supported: 11 === 
    2930 
    3031== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 141 === 
     175=== Total unknown or missing: 140 === 
  • trunk/loci/formats/doc/meta/MNGReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 10 of them (6%). 
    13   * Of those, Bio-Formats fully or partially converts 10 (100%). 
     12  * The file format itself supports 11 of them (7%). 
     13  * Of those, Bio-Formats fully or partially converts 11 (100%). 
    1414 
    1515== Supported fields == 
     
    1717Bio-Formats Multiple Network Graphics format reader: 
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
     19  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r1844 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r1844 
     
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r1844 
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r1844 
    28 === Total supported: 10 === 
     29=== Total supported: 11 === 
    2930 
    3031== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 141 === 
     175=== Total unknown or missing: 140 === 
  • trunk/loci/formats/doc/meta/MRCReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 12 of them (7%). 
    13   * Of those, Bio-Formats fully or partially converts 12 (100%). 
     12  * The file format itself supports 13 of them (8%). 
     13  * Of those, Bio-Formats fully or partially converts 13 (100%). 
    1414 
    1515== Supported fields == 
     
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeY 
    2020  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeZ 
     21  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r1806 
    2223  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r1806 
     
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r1806 
    2930  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r1806 
    30 === Total supported: 12 === 
     31=== Total supported: 13 === 
    3132 
    3233== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 139 === 
     175=== Total unknown or missing: 138 === 
  • trunk/loci/formats/doc/meta/MetamorphReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 16 of them (10%). 
    13   * Of those, Bio-Formats fully or partially converts 16 (100%). 
     12  * The file format itself supports 17 of them (11%). 
     13  * Of those, Bio-Formats fully or partially converts 17 (100%). 
    1414 
    1515== Supported fields == 
     
    2323  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: Institution 
    2424  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: LastName 
     25  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r639 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r639 
     
    3233  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r639 
    3334  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r639 
    34 === Total supported: 16 === 
     35=== Total supported: 17 === 
    3536 
    3637== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 135 === 
     175=== Total unknown or missing: 134 === 
  • trunk/loci/formats/doc/meta/MetamorphTiffReader.txt

    r4254 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 24 of them (15%). 
    13   * Of those, Bio-Formats fully or partially converts 24 (100%). 
     12  * The file format itself supports 25 of them (16%). 
     13  * Of those, Bio-Formats fully or partially converts 25 (100%). 
    1414 
    1515== Supported fields == 
     
    2626  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
    2727  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_ImagingEnvironment ImagingEnvironment]: Temperature 
     28  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r3700 
    2930  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r3700 
     
    4041  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_PlaneTiming PlaneTiming]: DeltaT - since r4254 
    4142  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_PlaneTiming PlaneTiming]: ExposureTime - since r4254 
    42 === Total supported: 24 === 
     43=== Total supported: 25 === 
    4344 
    4445== Unknown or missing fields == 
     
    104105  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    105106  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    106   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    107107  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    108108  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 127 === 
     175=== Total unknown or missing: 126 === 
  • trunk/loci/formats/doc/meta/MicromanagerReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Micro-Manager format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r2384 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r2384 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r2384 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r2384 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/NAFReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Hamamatsu Aquacosmos format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r4059 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r4059 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r4059 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r4059 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/ND2Reader.txt

    r4199 r4257  
    1111Of the 151 fields documented below: 
    1212  * The file format itself supports 34 of them (22%). 
    13   * Of those, Bio-Formats fully or partially converts 17 (50%). 
     13  * Of those, Bio-Formats fully or partially converts 18 (52%). 
    1414 
    1515== Supported fields == 
     
    2020  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeZ 
    2121  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
     22  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2223  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r1777 
    2324  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r1777 
     
    3334  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Plane Plane]: TheZ 
    3435  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_PlaneTiming PlaneTiming]: DeltaT 
    35 === Total supported: 17 === 
     36=== Total supported: 18 === 
    3637 
    3738== Unsupported fields == 
     
    5354  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    5455  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    55   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    5656  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Objective Objective]: CalibratedMagnification 
    5757  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Objective Objective]: LensNA 
    58 === Total unsupported: 17 === 
     58=== Total unsupported: 16 === 
    5959 
    6060== Unknown or missing fields == 
  • trunk/loci/formats/doc/meta/NRRDReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 12 of them (7%). 
    13   * Of those, Bio-Formats fully or partially converts 12 (100%). 
     12  * The file format itself supports 13 of them (8%). 
     13  * Of those, Bio-Formats fully or partially converts 13 (100%). 
    1414 
    1515== Supported fields == 
     
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeY 
    2020  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeZ 
     21  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r2625 
    2223  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r2625 
     
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r2625 
    2930  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r2625 
    30 === Total supported: 12 === 
     31=== Total supported: 13 === 
    3132 
    3233== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 139 === 
     175=== Total unknown or missing: 138 === 
  • trunk/loci/formats/doc/meta/NikonReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 16 of them (10%). 
    13   * Of those, Bio-Formats fully or partially converts 16 (100%). 
     12  * The file format itself supports 17 of them (11%). 
     13  * Of those, Bio-Formats fully or partially converts 17 (100%). 
    1414 
    1515== Supported fields == 
     
    2323  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: Institution 
    2424  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: LastName 
     25  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r869 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r869 
     
    3233  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r869 
    3334  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r869 
    34 === Total supported: 16 === 
     35=== Total supported: 17 === 
    3536 
    3637== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 135 === 
     175=== Total unknown or missing: 134 === 
  • trunk/loci/formats/doc/meta/OpenlabRawReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 10 of them (6%). 
    13   * Of those, Bio-Formats fully or partially converts 10 (100%). 
     12  * The file format itself supports 11 of them (7%). 
     13  * Of those, Bio-Formats fully or partially converts 11 (100%). 
    1414 
    1515== Supported fields == 
     
    1717Bio-Formats Openlab RAW format reader: 
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: CreationDate 
     19  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r879 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r879 
     
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r879 
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r879 
    28 === Total supported: 10 === 
     29=== Total supported: 11 === 
    2930 
    3031== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 141 === 
     175=== Total unknown or missing: 140 === 
  • trunk/loci/formats/doc/meta/OpenlabReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 16 of them (10%). 
    13   * Of those, Bio-Formats fully or partially converts 14 (87%). 
     12  * The file format itself supports 17 of them (11%). 
     13  * Of those, Bio-Formats fully or partially converts 15 (88%). 
    1414 
    1515== Supported fields == 
     
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeX 
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeY 
     20  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r659 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r659 
     
    3031  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_StagePosition StagePosition]: PositionY 
    3132  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_StagePosition StagePosition]: PositionZ 
    32 === Total supported: 14 === 
     33=== Total supported: 15 === 
    3334 
    3435== Unsupported fields == 
     
    108109  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    109110  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    110   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    111111  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    112112  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179179  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180180  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 135 === 
     181=== Total unknown or missing: 134 === 
  • trunk/loci/formats/doc/meta/PCIReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 11 of them (7%). 
    13   * Of those, Bio-Formats fully or partially converts 11 (100%). 
     12  * The file format itself supports 12 of them (7%). 
     13  * Of those, Bio-Formats fully or partially converts 12 (100%). 
    1414 
    1515== Supported fields == 
     
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeX 
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeY 
     20  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r3148 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r3148 
     
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r3148 
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r3148 
    29 === Total supported: 11 === 
     30=== Total supported: 12 === 
    3031 
    3132== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 140 === 
     175=== Total unknown or missing: 139 === 
  • trunk/loci/formats/doc/meta/PCXReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats PCX format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r3727 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r3727 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r3727 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r3727 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/PGMReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Portable Gray Map format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r2595 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r2595 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r2595 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r2595 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/PSDReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats Adobe Photoshop format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r3202 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r3202 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r3202 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r3202 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/PerkinElmerReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 26 of them (17%). 
    13   * Of those, Bio-Formats fully or partially converts 22 (84%). 
     12  * The file format itself supports 27 of them (17%). 
     13  * Of those, Bio-Formats fully or partially converts 23 (85%). 
    1414 
    1515== Supported fields == 
     
    2121  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: EmWave 
    2222  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: ExWave 
     23  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2324  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r639 
    2425  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r639 
     
    3839  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_StagePosition StagePosition]: PositionY 
    3940  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_StagePosition StagePosition]: PositionZ 
    40 === Total supported: 22 === 
     41=== Total supported: 23 === 
    4142 
    4243== Unsupported fields == 
     
    117118  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    118119  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    119   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    120120  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    121121  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179179  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180180  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 125 === 
     181=== Total unknown or missing: 124 === 
  • trunk/loci/formats/doc/meta/PictReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats PICT format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r764 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r764 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r764 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r764 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/PrairieReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 15 of them (9%). 
    13   * Of those, Bio-Formats fully or partially converts 12 (80%). 
     12  * The file format itself supports 16 of them (10%). 
     13  * Of those, Bio-Formats fully or partially converts 13 (81%). 
    1414 
    1515== Supported fields == 
     
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Dimensions]: PhysicalSizeY 
    2020  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: CreationDate 
     21  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r1996 
    2223  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r1996 
     
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r1996 
    2930  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r1996 
    30 === Total supported: 12 === 
     31=== Total supported: 13 === 
    3132 
    3233== Unsupported fields == 
     
    105106  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    106107  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    107   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    108108  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    109109  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    179179  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    180180  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    181 === Total unknown or missing: 136 === 
     181=== Total unknown or missing: 135 === 
  • trunk/loci/formats/doc/meta/QTReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats QuickTime format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r658 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r658 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r658 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r658 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/SDTReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats SPCImage Data format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r958 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r958 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r958 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r958 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/SEQReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 16 of them (10%). 
    13   * Of those, Bio-Formats fully or partially converts 16 (100%). 
     12  * The file format itself supports 17 of them (11%). 
     13  * Of those, Bio-Formats fully or partially converts 17 (100%). 
    1414 
    1515== Supported fields == 
     
    2323  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: Institution 
    2424  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: LastName 
     25  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r638 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r638 
     
    3233  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r638 
    3334  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r638 
    34 === Total supported: 16 === 
     35=== Total supported: 17 === 
    3536 
    3637== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 135 === 
     175=== Total unknown or missing: 134 === 
  • trunk/loci/formats/doc/meta/SVSReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 17 of them (11%). 
    13   * Of those, Bio-Formats fully or partially converts 17 (100%). 
     12  * The file format itself supports 18 of them (11%). 
     13  * Of those, Bio-Formats fully or partially converts 18 (100%). 
    1414 
    1515== Supported fields == 
     
    2424  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: LastName 
    2525  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
     26  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r3528 
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r3528 
     
    3334  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r3528 
    3435  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r3528 
    35 === Total supported: 17 === 
     36=== Total supported: 18 === 
    3637 
    3738== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 134 === 
     175=== Total unknown or missing: 133 === 
  • trunk/loci/formats/doc/meta/SlidebookReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 11 of them (7%). 
    13   * Of those, Bio-Formats fully or partially converts 11 (100%). 
     12  * The file format itself supports 12 of them (7%). 
     13  * Of those, Bio-Formats fully or partially converts 12 (100%). 
    1414 
    1515== Supported fields == 
     
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
    1919  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: Name 
     20  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r1519 
    2122  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r1519 
     
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r1519 
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r1519 
    29 === Total supported: 11 === 
     30=== Total supported: 12 === 
    3031 
    3132== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 140 === 
     175=== Total unknown or missing: 139 === 
  • trunk/loci/formats/doc/meta/TCSReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 18 of them (11%). 
    13   * Of those, Bio-Formats fully or partially converts 18 (100%). 
     12  * The file format itself supports 19 of them (12%). 
     13  * Of those, Bio-Formats fully or partially converts 19 (100%). 
    1414 
    1515== Supported fields == 
     
    2525  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: LastName 
    2626  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
     27  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r2940 
    2829  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r2940 
     
    3435  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r2940 
    3536  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r2940 
    36 === Total supported: 18 === 
     37=== Total supported: 19 === 
    3738 
    3839== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 133 === 
     175=== Total unknown or missing: 132 === 
  • trunk/loci/formats/doc/meta/TiffReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 16 of them (10%). 
    13   * Of those, Bio-Formats fully or partially converts 16 (100%). 
     12  * The file format itself supports 17 of them (11%). 
     13  * Of those, Bio-Formats fully or partially converts 17 (100%). 
    1414 
    1515== Supported fields == 
     
    2323  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: Institution 
    2424  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Experimenter Experimenter]: LastName 
     25  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r636 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r636 
     
    3233  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r636 
    3334  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r636 
    34 === Total supported: 16 === 
     35=== Total supported: 17 === 
    3536 
    3637== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 135 === 
     175=== Total unknown or missing: 134 === 
  • trunk/loci/formats/doc/meta/TillVisionReader.txt

    r4251 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 9 of them (5%). 
    13   * Of those, Bio-Formats fully or partially converts 9 (100%). 
     12  * The file format itself supports 10 of them (6%). 
     13  * Of those, Bio-Formats fully or partially converts 10 (100%). 
    1414 
    1515== Supported fields == 
    1616These fields are fully supported by the 
    1717Bio-Formats TillVision format reader: 
     18  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1819  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder 
     
    2526  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY 
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ 
    27 === Total supported: 9 === 
     28=== Total supported: 10 === 
    2829 
    2930== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 142 === 
     175=== Total unknown or missing: 141 === 
  • trunk/loci/formats/doc/meta/VisitechReader.txt

    r4199 r4257  
    1010 
    1111Of the 151 fields documented below: 
    12   * The file format itself supports 10 of them (6%). 
    13   * Of those, Bio-Formats fully or partially converts 10 (100%). 
     12  * The file format itself supports 11 of them (7%). 
     13  * Of those, Bio-Formats fully or partially converts 11 (100%). 
    1414 
    1515== Supported fields == 
     
    1717Bio-Formats Visitech XYS format reader: 
    1818  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Image Image]: Name 
     19  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    1920  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: BigEndian - since r2925 
    2021  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: DimensionOrder - since r2925 
     
    2627  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeY - since r2925 
    2728  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_Pixels Pixels]: SizeZ - since r2925 
    28 === Total supported: 10 === 
     29=== Total supported: 11 === 
    2930 
    3031== Unknown or missing fields == 
     
    99100  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PinholeSize 
    100101  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: PockelCellSetting 
    101   * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_LogicalChannel LogicalChannel]: SamplesPerPixel 
    102102  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: ID 
    103103  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_OTF OTF]: OpticalAxisAveraged 
     
    173173  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: PosY 
    174174  * [http://cvs.openmicroscopy.org.uk/svn/specification/Documentation/Generated/OME-2008-02/ome.xsd.html#element_WellSample WellSample]: Timepoint 
    175 === Total unknown or missing: 141 === 
     175=== Total unknown or missing: 140 === 
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