Ignore:
Timestamp:
09/10/09 19:48:48 (10 years ago)
Author:
curtis
Message:

Update Bio-Formats Ice package.

File:
1 edited

Legend:

Unmodified
Added
Removed
  • trunk/components/bio-formats-ice/src/bio-formats.ice

    r4953 r5463  
    55/* 
    66OME Bio-Formats package for reading and converting biological file formats. 
    7 Copyright (C) 2005-@year@ UW-Madison LOCI and Glencoe Software, Inc. 
     7Copyright (C) 2005-2009 UW-Madison LOCI and Glencoe Software, Inc. 
    88 
    99This program is free software; you can redistribute it and/or modify 
     
    2525 * 
    2626 * THIS IS AUTOMATICALLY GENERATED CODE.  DO NOT MODIFY. 
    27  * Created by curtis via MetadataAutogen on Oct 24, 2008 8:37:23 PM CDT 
     27 * Created by curtis via MetadataAutogen on Sep 10, 2009 7:46:33 PM CDT 
    2828 * 
    2929 *----------------------------------------------------------------------------- 
     
    153153    void setChannelComponentColorDomain(string colorDomain, int imageIndex, int logicalChannelIndex, int channelComponentIndex); 
    154154    void setChannelComponentIndex(int index, int imageIndex, int logicalChannelIndex, int channelComponentIndex); 
     155    void setChannelComponentPixels(string pixels, int imageIndex, int logicalChannelIndex, int channelComponentIndex); 
     156 
     157    // - Circle property storage - 
     158    void setCircleCx(string cx, int imageIndex, int roiIndex, int shapeIndex); 
     159    void setCircleCy(string cy, int imageIndex, int roiIndex, int shapeIndex); 
     160    void setCircleID(string id, int imageIndex, int roiIndex, int shapeIndex); 
     161    void setCircleR(string r, int imageIndex, int roiIndex, int shapeIndex); 
     162    void setCircleTransform(string transform, int imageIndex, int roiIndex, int shapeIndex); 
     163 
     164    // - Contact property storage - 
     165    void setContactExperimenter(string experimenter, int groupIndex); 
     166 
     167    // - Dataset property storage - 
     168    void setDatasetDescription(string description, int datasetIndex); 
     169    void setDatasetExperimenterRef(string experimenterRef, int datasetIndex); 
     170    void setDatasetGroupRef(string groupRef, int datasetIndex); 
     171    void setDatasetID(string id, int datasetIndex); 
     172    void setDatasetLocked(bool locked, int datasetIndex); 
     173    void setDatasetName(string name, int datasetIndex); 
     174 
     175    // - DatasetRef property storage - 
     176    void setDatasetRefID(string id, int imageIndex, int datasetRefIndex); 
    155177 
    156178    // - Detector property storage - 
     179    void setDetectorAmplificationGain(float amplificationGain, int instrumentIndex, int detectorIndex); 
    157180    void setDetectorGain(float gain, int instrumentIndex, int detectorIndex); 
    158181    void setDetectorID(string id, int instrumentIndex, int detectorIndex); 
     
    163186    void setDetectorType(string type, int instrumentIndex, int detectorIndex); 
    164187    void setDetectorVoltage(float voltage, int instrumentIndex, int detectorIndex); 
     188    void setDetectorZoom(float zoom, int instrumentIndex, int detectorIndex); 
    165189 
    166190    // - DetectorSettings property storage - 
     191    void setDetectorSettingsBinning(string binning, int imageIndex, int logicalChannelIndex); 
    167192    void setDetectorSettingsDetector(string detector, int imageIndex, int logicalChannelIndex); 
    168193    void setDetectorSettingsGain(float gain, int imageIndex, int logicalChannelIndex); 
    169194    void setDetectorSettingsOffset(float offset, int imageIndex, int logicalChannelIndex); 
     195    void setDetectorSettingsReadOutRate(float readOutRate, int imageIndex, int logicalChannelIndex); 
     196    void setDetectorSettingsVoltage(float voltage, int imageIndex, int logicalChannelIndex); 
     197 
     198    // - Dichroic property storage - 
     199    void setDichroicID(string id, int instrumentIndex, int dichroicIndex); 
     200    void setDichroicLotNumber(string lotNumber, int instrumentIndex, int dichroicIndex); 
     201    void setDichroicManufacturer(string manufacturer, int instrumentIndex, int dichroicIndex); 
     202    void setDichroicModel(string model, int instrumentIndex, int dichroicIndex); 
    170203 
    171204    // - Dimensions property storage - 
     
    178211 
    179212    // - DisplayOptions property storage - 
     213    void setDisplayOptionsDisplay(string display, int imageIndex); 
    180214    void setDisplayOptionsID(string id, int imageIndex); 
    181215    void setDisplayOptionsZoom(float zoom, int imageIndex); 
    182216 
    183     // - DisplayOptionsProjection property storage - 
    184     void setDisplayOptionsProjectionZStart(int zStart, int imageIndex); 
    185     void setDisplayOptionsProjectionZStop(int zStop, int imageIndex); 
    186  
    187     // - DisplayOptionsTime property storage - 
    188     void setDisplayOptionsTimeTStart(int tStart, int imageIndex); 
    189     void setDisplayOptionsTimeTStop(int tStop, int imageIndex); 
     217    // - Ellipse property storage - 
     218    void setEllipseCx(string cx, int imageIndex, int roiIndex, int shapeIndex); 
     219    void setEllipseCy(string cy, int imageIndex, int roiIndex, int shapeIndex); 
     220    void setEllipseID(string id, int imageIndex, int roiIndex, int shapeIndex); 
     221    void setEllipseRx(string rx, int imageIndex, int roiIndex, int shapeIndex); 
     222    void setEllipseRy(string ry, int imageIndex, int roiIndex, int shapeIndex); 
     223    void setEllipseTransform(string transform, int imageIndex, int roiIndex, int shapeIndex); 
     224 
     225    // - EmFilter property storage - 
     226    void setEmFilterLotNumber(string lotNumber, int instrumentIndex, int filterIndex); 
     227    void setEmFilterManufacturer(string manufacturer, int instrumentIndex, int filterIndex); 
     228    void setEmFilterModel(string model, int instrumentIndex, int filterIndex); 
     229    void setEmFilterType(string type, int instrumentIndex, int filterIndex); 
     230 
     231    // - ExFilter property storage - 
     232    void setExFilterLotNumber(string lotNumber, int instrumentIndex, int filterIndex); 
     233    void setExFilterManufacturer(string manufacturer, int instrumentIndex, int filterIndex); 
     234    void setExFilterModel(string model, int instrumentIndex, int filterIndex); 
     235    void setExFilterType(string type, int instrumentIndex, int filterIndex); 
    190236 
    191237    // - Experiment property storage - 
    192238    void setExperimentDescription(string description, int experimentIndex); 
     239    void setExperimentExperimenterRef(string experimenterRef, int experimentIndex); 
    193240    void setExperimentID(string id, int experimentIndex); 
    194241    void setExperimentType(string type, int experimentIndex); 
     
    200247    void setExperimenterInstitution(string institution, int experimenterIndex); 
    201248    void setExperimenterLastName(string lastName, int experimenterIndex); 
     249    void setExperimenterOMEName(string omeName, int experimenterIndex); 
    202250 
    203251    // - ExperimenterMembership property storage - 
     
    207255    void setFilamentType(string type, int instrumentIndex, int lightSourceIndex); 
    208256 
     257    // - Filter property storage - 
     258    void setFilterFilterWheel(string filterWheel, int instrumentIndex, int filterIndex); 
     259    void setFilterID(string id, int instrumentIndex, int filterIndex); 
     260    void setFilterLotNumber(string lotNumber, int instrumentIndex, int filterIndex); 
     261    void setFilterManufacturer(string manufacturer, int instrumentIndex, int filterIndex); 
     262    void setFilterModel(string model, int instrumentIndex, int filterIndex); 
     263    void setFilterType(string type, int instrumentIndex, int filterIndex); 
     264 
     265    // - FilterSet property storage - 
     266    void setFilterSetDichroic(string dichroic, int instrumentIndex, int filterSetIndex); 
     267    void setFilterSetEmFilter(string emFilter, int instrumentIndex, int filterSetIndex); 
     268    void setFilterSetExFilter(string exFilter, int instrumentIndex, int filterSetIndex); 
     269    void setFilterSetID(string id, int instrumentIndex, int filterSetIndex); 
     270    void setFilterSetLotNumber(string lotNumber, int instrumentIndex, int filterSetIndex); 
     271    void setFilterSetManufacturer(string manufacturer, int instrumentIndex, int filterSetIndex); 
     272    void setFilterSetModel(string model, int instrumentIndex, int filterSetIndex); 
     273 
     274    // - Group property storage - 
     275    void setGroupID(string id, int groupIndex); 
     276    void setGroupName(string name, int groupIndex); 
     277 
    209278    // - GroupRef property storage - 
    210279 
    211280    // - Image property storage - 
     281    void setImageAcquiredPixels(string acquiredPixels, int imageIndex); 
    212282    void setImageCreationDate(string creationDate, int imageIndex); 
    213283    void setImageDefaultPixels(string defaultPixels, int imageIndex); 
    214284    void setImageDescription(string description, int imageIndex); 
     285    void setImageExperimentRef(string experimentRef, int imageIndex); 
     286    void setImageExperimenterRef(string experimenterRef, int imageIndex); 
     287    void setImageGroupRef(string groupRef, int imageIndex); 
    215288    void setImageID(string id, int imageIndex); 
    216289    void setImageInstrumentRef(string instrumentRef, int imageIndex); 
     
    229302    void setLaserFrequencyMultiplication(int frequencyMultiplication, int instrumentIndex, int lightSourceIndex); 
    230303    void setLaserLaserMedium(string laserMedium, int instrumentIndex, int lightSourceIndex); 
     304    void setLaserPockelCell(bool pockelCell, int instrumentIndex, int lightSourceIndex); 
    231305    void setLaserPulse(string pulse, int instrumentIndex, int lightSourceIndex); 
     306    void setLaserRepetitionRate(bool repetitionRate, int instrumentIndex, int lightSourceIndex); 
    232307    void setLaserTuneable(bool tuneable, int instrumentIndex, int lightSourceIndex); 
    233308    void setLaserType(string type, int instrumentIndex, int lightSourceIndex); 
     
    241316    void setLightSourceSerialNumber(string serialNumber, int instrumentIndex, int lightSourceIndex); 
    242317 
     318    // - LightSourceRef property storage - 
     319    void setLightSourceRefAttenuation(float attenuation, int imageIndex, int microbeamManipulationIndex, int lightSourceRefIndex); 
     320    void setLightSourceRefLightSource(string lightSource, int imageIndex, int microbeamManipulationIndex, int lightSourceRefIndex); 
     321    void setLightSourceRefWavelength(int wavelength, int imageIndex, int microbeamManipulationIndex, int lightSourceRefIndex); 
     322 
    243323    // - LightSourceSettings property storage - 
    244324    void setLightSourceSettingsAttenuation(float attenuation, int imageIndex, int logicalChannelIndex); 
     
    246326    void setLightSourceSettingsWavelength(int wavelength, int imageIndex, int logicalChannelIndex); 
    247327 
     328    // - Line property storage - 
     329    void setLineID(string id, int imageIndex, int roiIndex, int shapeIndex); 
     330    void setLineTransform(string transform, int imageIndex, int roiIndex, int shapeIndex); 
     331    void setLineX1(string x1, int imageIndex, int roiIndex, int shapeIndex); 
     332    void setLineX2(string x2, int imageIndex, int roiIndex, int shapeIndex); 
     333    void setLineY1(string y1, int imageIndex, int roiIndex, int shapeIndex); 
     334    void setLineY2(string y2, int imageIndex, int roiIndex, int shapeIndex); 
     335 
    248336    // - LogicalChannel property storage - 
    249337    void setLogicalChannelContrastMethod(string contrastMethod, int imageIndex, int logicalChannelIndex); 
     338    void setLogicalChannelDetector(string detector, int imageIndex, int logicalChannelIndex); 
    250339    void setLogicalChannelEmWave(int emWave, int imageIndex, int logicalChannelIndex); 
    251340    void setLogicalChannelExWave(int exWave, int imageIndex, int logicalChannelIndex); 
     341    void setLogicalChannelFilterSet(string filterSet, int imageIndex, int logicalChannelIndex); 
    252342    void setLogicalChannelFluor(string fluor, int imageIndex, int logicalChannelIndex); 
    253343    void setLogicalChannelID(string id, int imageIndex, int logicalChannelIndex); 
    254344    void setLogicalChannelIlluminationType(string illuminationType, int imageIndex, int logicalChannelIndex); 
     345    void setLogicalChannelLightSource(string lightSource, int imageIndex, int logicalChannelIndex); 
    255346    void setLogicalChannelMode(string mode, int imageIndex, int logicalChannelIndex); 
    256347    void setLogicalChannelName(string name, int imageIndex, int logicalChannelIndex); 
     
    261352    void setLogicalChannelPockelCellSetting(int pockelCellSetting, int imageIndex, int logicalChannelIndex); 
    262353    void setLogicalChannelSamplesPerPixel(int samplesPerPixel, int imageIndex, int logicalChannelIndex); 
     354    void setLogicalChannelSecondaryEmissionFilter(string secondaryEmissionFilter, int imageIndex, int logicalChannelIndex); 
     355    void setLogicalChannelSecondaryExcitationFilter(string secondaryExcitationFilter, int imageIndex, int logicalChannelIndex); 
     356 
     357    // - Mask property storage - 
     358    void setMaskHeight(string height, int imageIndex, int roiIndex, int shapeIndex); 
     359    void setMaskID(string id, int imageIndex, int roiIndex, int shapeIndex); 
     360    void setMaskTransform(string transform, int imageIndex, int roiIndex, int shapeIndex); 
     361    void setMaskWidth(string width, int imageIndex, int roiIndex, int shapeIndex); 
     362    void setMaskX(string x, int imageIndex, int roiIndex, int shapeIndex); 
     363    void setMaskY(string y, int imageIndex, int roiIndex, int shapeIndex); 
     364 
     365    // - MaskPixels property storage - 
     366    void setMaskPixelsBigEndian(bool bigEndian, int imageIndex, int roiIndex, int shapeIndex); 
     367    void setMaskPixelsBinData(string binData, int imageIndex, int roiIndex, int shapeIndex); 
     368    void setMaskPixelsExtendedPixelType(string extendedPixelType, int imageIndex, int roiIndex, int shapeIndex); 
     369    void setMaskPixelsID(string id, int imageIndex, int roiIndex, int shapeIndex); 
     370    void setMaskPixelsSizeX(int sizeX, int imageIndex, int roiIndex, int shapeIndex); 
     371    void setMaskPixelsSizeY(int sizeY, int imageIndex, int roiIndex, int shapeIndex); 
     372 
     373    // - MicrobeamManipulation property storage - 
     374    void setMicrobeamManipulationExperimenterRef(string experimenterRef, int imageIndex, int microbeamManipulationIndex); 
     375    void setMicrobeamManipulationID(string id, int imageIndex, int microbeamManipulationIndex); 
     376    void setMicrobeamManipulationType(string type, int imageIndex, int microbeamManipulationIndex); 
     377 
     378    // - MicrobeamManipulationRef property storage - 
     379    void setMicrobeamManipulationRefID(string id, int experimentIndex, int microbeamManipulationRefIndex); 
     380 
     381    // - Microscope property storage - 
     382    void setMicroscopeID(string id, int instrumentIndex); 
     383    void setMicroscopeManufacturer(string manufacturer, int instrumentIndex); 
     384    void setMicroscopeModel(string model, int instrumentIndex); 
     385    void setMicroscopeSerialNumber(string serialNumber, int instrumentIndex); 
     386    void setMicroscopeType(string type, int instrumentIndex); 
    263387 
    264388    // - OTF property storage - 
     389    void setOTFBinaryFile(string binaryFile, int instrumentIndex, int otfIndex); 
    265390    void setOTFID(string id, int instrumentIndex, int otfIndex); 
    266391    void setOTFObjective(string objective, int instrumentIndex, int otfIndex); 
     
    275400    void setObjectiveID(string id, int instrumentIndex, int objectiveIndex); 
    276401    void setObjectiveImmersion(string immersion, int instrumentIndex, int objectiveIndex); 
     402    void setObjectiveIris(bool iris, int instrumentIndex, int objectiveIndex); 
    277403    void setObjectiveLensNA(float lensNA, int instrumentIndex, int objectiveIndex); 
    278404    void setObjectiveManufacturer(string manufacturer, int instrumentIndex, int objectiveIndex); 
     
    281407    void setObjectiveSerialNumber(string serialNumber, int instrumentIndex, int objectiveIndex); 
    282408    void setObjectiveWorkingDistance(float workingDistance, int instrumentIndex, int objectiveIndex); 
     409 
     410    // - ObjectiveSettings property storage - 
     411    void setObjectiveSettingsCorrectionCollar(float correctionCollar, int imageIndex); 
     412    void setObjectiveSettingsMedium(string medium, int imageIndex); 
     413    void setObjectiveSettingsObjective(string objective, int imageIndex); 
     414    void setObjectiveSettingsRefractiveIndex(float refractiveIndex, int imageIndex); 
     415 
     416    // - Path property storage - 
     417    void setPathD(string d, int imageIndex, int roiIndex, int shapeIndex); 
     418    void setPathID(string id, int imageIndex, int roiIndex, int shapeIndex); 
    283419 
    284420    // - Pixels property storage - 
     
    294430 
    295431    // - Plane property storage - 
     432    void setPlaneHashSHA1(string hashSHA1, int imageIndex, int pixelsIndex, int planeIndex); 
     433    void setPlaneID(string id, int imageIndex, int pixelsIndex, int planeIndex); 
    296434    void setPlaneTheC(int theC, int imageIndex, int pixelsIndex, int planeIndex); 
    297435    void setPlaneTheT(int theT, int imageIndex, int pixelsIndex, int planeIndex); 
     
    303441 
    304442    // - Plate property storage - 
     443    void setPlateColumnNamingConvention(string columnNamingConvention, int plateIndex); 
    305444    void setPlateDescription(string description, int plateIndex); 
    306445    void setPlateExternalIdentifier(string externalIdentifier, int plateIndex); 
    307446    void setPlateID(string id, int plateIndex); 
    308447    void setPlateName(string name, int plateIndex); 
     448    void setPlateRowNamingConvention(string rowNamingConvention, int plateIndex); 
    309449    void setPlateStatus(string status, int plateIndex); 
     450    void setPlateWellOriginX(double wellOriginX, int plateIndex); 
     451    void setPlateWellOriginY(double wellOriginY, int plateIndex); 
    310452 
    311453    // - PlateRef property storage - 
    312454    void setPlateRefID(string id, int screenIndex, int plateRefIndex); 
     455    void setPlateRefSample(int sample, int screenIndex, int plateRefIndex); 
     456    void setPlateRefWell(string well, int screenIndex, int plateRefIndex); 
     457 
     458    // - Point property storage - 
     459    void setPointCx(string cx, int imageIndex, int roiIndex, int shapeIndex); 
     460    void setPointCy(string cy, int imageIndex, int roiIndex, int shapeIndex); 
     461    void setPointID(string id, int imageIndex, int roiIndex, int shapeIndex); 
     462    void setPointR(string r, int imageIndex, int roiIndex, int shapeIndex); 
     463    void setPointTransform(string transform, int imageIndex, int roiIndex, int shapeIndex); 
     464 
     465    // - Polygon property storage - 
     466    void setPolygonID(string id, int imageIndex, int roiIndex, int shapeIndex); 
     467    void setPolygonPoints(string points, int imageIndex, int roiIndex, int shapeIndex); 
     468    void setPolygonTransform(string transform, int imageIndex, int roiIndex, int shapeIndex); 
     469 
     470    // - Polyline property storage - 
     471    void setPolylineID(string id, int imageIndex, int roiIndex, int shapeIndex); 
     472    void setPolylinePoints(string points, int imageIndex, int roiIndex, int shapeIndex); 
     473    void setPolylineTransform(string transform, int imageIndex, int roiIndex, int shapeIndex); 
     474 
     475    // - Project property storage - 
     476    void setProjectDescription(string description, int projectIndex); 
     477    void setProjectExperimenterRef(string experimenterRef, int projectIndex); 
     478    void setProjectGroupRef(string groupRef, int projectIndex); 
     479    void setProjectID(string id, int projectIndex); 
     480    void setProjectName(string name, int projectIndex); 
     481 
     482    // - ProjectRef property storage - 
     483    void setProjectRefID(string id, int datasetIndex, int projectRefIndex); 
     484 
     485    // - Pump property storage - 
     486    void setPumpLightSource(string lightSource, int instrumentIndex, int lightSourceIndex); 
    313487 
    314488    // - ROI property storage - 
     
    323497    void setROIZ1(int z1, int imageIndex, int roiIndex); 
    324498 
     499    // - ROIRef property storage - 
     500    void setROIRefID(string id, int imageIndex, int microbeamManipulationIndex, int roiRefIndex); 
     501 
    325502    // - Reagent property storage - 
    326503    void setReagentDescription(string description, int screenIndex, int reagentIndex); 
     
    329506    void setReagentReagentIdentifier(string reagentIdentifier, int screenIndex, int reagentIndex); 
    330507 
     508    // - Rect property storage - 
     509    void setRectHeight(string height, int imageIndex, int roiIndex, int shapeIndex); 
     510    void setRectID(string id, int imageIndex, int roiIndex, int shapeIndex); 
     511    void setRectTransform(string transform, int imageIndex, int roiIndex, int shapeIndex); 
     512    void setRectWidth(string width, int imageIndex, int roiIndex, int shapeIndex); 
     513    void setRectX(string x, int imageIndex, int roiIndex, int shapeIndex); 
     514    void setRectY(string y, int imageIndex, int roiIndex, int shapeIndex); 
     515 
     516    // - Region property storage - 
     517    void setRegionID(string id, int imageIndex, int regionIndex); 
     518    void setRegionName(string name, int imageIndex, int regionIndex); 
     519    void setRegionTag(string tag, int imageIndex, int regionIndex); 
     520 
     521    // - RoiLink property storage - 
     522    void setRoiLinkDirection(string direction, int imageIndex, int roiIndex, int roiLinkIndex); 
     523    void setRoiLinkName(string name, int imageIndex, int roiIndex, int roiLinkIndex); 
     524    void setRoiLinkRef(string ref, int imageIndex, int roiIndex, int roiLinkIndex); 
     525 
    331526    // - Screen property storage - 
     527    void setScreenDescription(string description, int screenIndex); 
     528    void setScreenExtern(string extern, int screenIndex); 
    332529    void setScreenID(string id, int screenIndex); 
    333530    void setScreenName(string name, int screenIndex); 
     
    335532    void setScreenProtocolIdentifier(string protocolIdentifier, int screenIndex); 
    336533    void setScreenReagentSetDescription(string reagentSetDescription, int screenIndex); 
     534    void setScreenReagentSetIdentifier(string reagentSetIdentifier, int screenIndex); 
    337535    void setScreenType(string type, int screenIndex); 
    338536 
     
    341539    void setScreenAcquisitionID(string id, int screenIndex, int screenAcquisitionIndex); 
    342540    void setScreenAcquisitionStartTime(string startTime, int screenIndex, int screenAcquisitionIndex); 
     541 
     542    // - ScreenRef property storage - 
     543    void setScreenRefID(string id, int plateIndex, int screenRefIndex); 
     544 
     545    // - Shape property storage - 
     546    void setShapeBaselineShift(string baselineShift, int imageIndex, int roiIndex, int shapeIndex); 
     547    void setShapeDirection(string direction, int imageIndex, int roiIndex, int shapeIndex); 
     548    void setShapeFillColor(string fillColor, int imageIndex, int roiIndex, int shapeIndex); 
     549    void setShapeFillOpacity(string fillOpacity, int imageIndex, int roiIndex, int shapeIndex); 
     550    void setShapeFillRule(string fillRule, int imageIndex, int roiIndex, int shapeIndex); 
     551    void setShapeFontFamily(string fontFamily, int imageIndex, int roiIndex, int shapeIndex); 
     552    void setShapeFontSize(int fontSize, int imageIndex, int roiIndex, int shapeIndex); 
     553    void setShapeFontStretch(string fontStretch, int imageIndex, int roiIndex, int shapeIndex); 
     554    void setShapeFontStyle(string fontStyle, int imageIndex, int roiIndex, int shapeIndex); 
     555    void setShapeFontVariant(string fontVariant, int imageIndex, int roiIndex, int shapeIndex); 
     556    void setShapeFontWeight(string fontWeight, int imageIndex, int roiIndex, int shapeIndex); 
     557    void setShapeG(string g, int imageIndex, int roiIndex, int shapeIndex); 
     558    void setShapeGlyphOrientationVertical(int glyphOrientationVertical, int imageIndex, int roiIndex, int shapeIndex); 
     559    void setShapeID(string id, int imageIndex, int roiIndex, int shapeIndex); 
     560    void setShapeLocked(bool locked, int imageIndex, int roiIndex, int shapeIndex); 
     561    void setShapeStrokeAttribute(string strokeAttribute, int imageIndex, int roiIndex, int shapeIndex); 
     562    void setShapeStrokeColor(string strokeColor, int imageIndex, int roiIndex, int shapeIndex); 
     563    void setShapeStrokeDashArray(string strokeDashArray, int imageIndex, int roiIndex, int shapeIndex); 
     564    void setShapeStrokeLineCap(string strokeLineCap, int imageIndex, int roiIndex, int shapeIndex); 
     565    void setShapeStrokeLineJoin(string strokeLineJoin, int imageIndex, int roiIndex, int shapeIndex); 
     566    void setShapeStrokeMiterLimit(int strokeMiterLimit, int imageIndex, int roiIndex, int shapeIndex); 
     567    void setShapeStrokeOpacity(float strokeOpacity, int imageIndex, int roiIndex, int shapeIndex); 
     568    void setShapeStrokeWidth(int strokeWidth, int imageIndex, int roiIndex, int shapeIndex); 
     569    void setShapeText(string text, int imageIndex, int roiIndex, int shapeIndex); 
     570    void setShapeTextAnchor(string textAnchor, int imageIndex, int roiIndex, int shapeIndex); 
     571    void setShapeTextDecoration(string textDecoration, int imageIndex, int roiIndex, int shapeIndex); 
     572    void setShapeTextFill(string textFill, int imageIndex, int roiIndex, int shapeIndex); 
     573    void setShapeTextStroke(string textStroke, int imageIndex, int roiIndex, int shapeIndex); 
     574    void setShapeTheT(int theT, int imageIndex, int roiIndex, int shapeIndex); 
     575    void setShapeTheZ(int theZ, int imageIndex, int roiIndex, int shapeIndex); 
     576    void setShapeVectorEffect(string vectorEffect, int imageIndex, int roiIndex, int shapeIndex); 
     577    void setShapeVisibility(bool visibility, int imageIndex, int roiIndex, int shapeIndex); 
     578    void setShapeWritingMode(string writingMode, int imageIndex, int roiIndex, int shapeIndex); 
    343579 
    344580    // - StageLabel property storage - 
     
    352588    void setStagePositionPositionY(float positionY, int imageIndex, int pixelsIndex, int planeIndex); 
    353589    void setStagePositionPositionZ(float positionZ, int imageIndex, int pixelsIndex, int planeIndex); 
     590 
     591    // - Thumbnail property storage - 
     592    void setThumbnailHref(string href, int imageIndex); 
     593    void setThumbnailID(string id, int imageIndex); 
     594    void setThumbnailMIMEtype(string mimEtype, int imageIndex); 
    354595 
    355596    // - TiffData property storage - 
     
    362603    void setTiffDataUUID(string uuid, int imageIndex, int pixelsIndex, int tiffDataIndex); 
    363604 
     605    // - TransmittanceRange property storage - 
     606    void setTransmittanceRangeCutIn(int cutIn, int instrumentIndex, int filterIndex); 
     607    void setTransmittanceRangeCutInTolerance(int cutInTolerance, int instrumentIndex, int filterIndex); 
     608    void setTransmittanceRangeCutOut(int cutOut, int instrumentIndex, int filterIndex); 
     609    void setTransmittanceRangeCutOutTolerance(int cutOutTolerance, int instrumentIndex, int filterIndex); 
     610    void setTransmittanceRangeTransmittance(int transmittance, int instrumentIndex, int filterIndex); 
     611 
    364612    // - Well property storage - 
    365613    void setWellColumn(int column, int plateIndex, int wellIndex); 
     
    367615    void setWellExternalIdentifier(string externalIdentifier, int plateIndex, int wellIndex); 
    368616    void setWellID(string id, int plateIndex, int wellIndex); 
     617    void setWellReagent(string reagent, int plateIndex, int wellIndex); 
    369618    void setWellRow(int row, int plateIndex, int wellIndex); 
    370619    void setWellType(string type, int plateIndex, int wellIndex); 
     
    372621    // - WellSample property storage - 
    373622    void setWellSampleID(string id, int plateIndex, int wellIndex, int wellSampleIndex); 
     623    void setWellSampleImageRef(string imageRef, int plateIndex, int wellIndex, int wellSampleIndex); 
    374624    void setWellSampleIndex(int index, int plateIndex, int wellIndex, int wellSampleIndex); 
    375625    void setWellSamplePosX(float posX, int plateIndex, int wellIndex, int wellSampleIndex); 
    376626    void setWellSamplePosY(float posY, int plateIndex, int wellIndex, int wellSampleIndex); 
    377627    void setWellSampleTimepoint(int timepoint, int plateIndex, int wellIndex, int wellSampleIndex); 
     628 
     629    // - WellSampleRef property storage - 
     630    void setWellSampleRefID(string id, int screenIndex, int screenAcquisitionIndex, int wellSampleRefIndex); 
    378631  }; 
    379632 
     
    385638 
    386639    int getChannelComponentCount(int imageIndex, int logicalChannelIndex); 
     640    int getDatasetCount(); 
     641    int getDatasetRefCount(int imageIndex); 
    387642    int getDetectorCount(int instrumentIndex); 
     643    int getDichroicCount(int instrumentIndex); 
    388644    int getExperimentCount(); 
    389645    int getExperimenterCount(); 
    390646    int getExperimenterMembershipCount(int experimenterIndex); 
     647    int getFilterCount(int instrumentIndex); 
     648    int getFilterSetCount(int instrumentIndex); 
     649    int getGroupCount(); 
    391650    int getGroupRefCount(int experimenterIndex); 
    392651    int getImageCount(); 
    393652    int getInstrumentCount(); 
    394653    int getLightSourceCount(int instrumentIndex); 
     654    int getLightSourceRefCount(int imageIndex, int microbeamManipulationIndex); 
    395655    int getLogicalChannelCount(int imageIndex); 
     656    int getMicrobeamManipulationCount(int imageIndex); 
     657    int getMicrobeamManipulationRefCount(int experimentIndex); 
    396658    int getOTFCount(int instrumentIndex); 
    397659    int getObjectiveCount(int instrumentIndex); 
     
    400662    int getPlateCount(); 
    401663    int getPlateRefCount(int screenIndex); 
     664    int getProjectCount(); 
     665    int getProjectRefCount(int datasetIndex); 
    402666    int getROICount(int imageIndex); 
     667    int getROIRefCount(int imageIndex, int microbeamManipulationIndex); 
    403668    int getReagentCount(int screenIndex); 
     669    int getRegionCount(int imageIndex); 
     670    int getRoiLinkCount(int imageIndex, int roiIndex); 
    404671    int getScreenCount(); 
    405672    int getScreenAcquisitionCount(int screenIndex); 
     673    int getScreenRefCount(int plateIndex); 
     674    int getShapeCount(int imageIndex, int roiIndex); 
    406675    int getTiffDataCount(int imageIndex, int pixelsIndex); 
    407676    int getWellCount(int plateIndex); 
    408677    int getWellSampleCount(int plateIndex, int wellIndex); 
     678    int getWellSampleRefCount(int screenIndex, int screenAcquisitionIndex); 
    409679 
    410680    // - Entity retrieval - 
     
    420690    string getChannelComponentColorDomain(int imageIndex, int logicalChannelIndex, int channelComponentIndex); 
    421691    int getChannelComponentIndex(int imageIndex, int logicalChannelIndex, int channelComponentIndex); 
     692    string getChannelComponentPixels(int imageIndex, int logicalChannelIndex, int channelComponentIndex); 
     693 
     694    // - Circle property retrieval - 
     695 
     696    string getCircleCx(int imageIndex, int roiIndex, int shapeIndex); 
     697    string getCircleCy(int imageIndex, int roiIndex, int shapeIndex); 
     698    string getCircleID(int imageIndex, int roiIndex, int shapeIndex); 
     699    string getCircleR(int imageIndex, int roiIndex, int shapeIndex); 
     700    string getCircleTransform(int imageIndex, int roiIndex, int shapeIndex); 
     701 
     702    // - Contact property retrieval - 
     703 
     704    string getContactExperimenter(int groupIndex); 
     705 
     706    // - Dataset property retrieval - 
     707 
     708    string getDatasetDescription(int datasetIndex); 
     709    string getDatasetExperimenterRef(int datasetIndex); 
     710    string getDatasetGroupRef(int datasetIndex); 
     711    string getDatasetID(int datasetIndex); 
     712    bool getDatasetLocked(int datasetIndex); 
     713    string getDatasetName(int datasetIndex); 
     714 
     715    // - DatasetRef property retrieval - 
     716 
     717    string getDatasetRefID(int imageIndex, int datasetRefIndex); 
    422718 
    423719    // - Detector property retrieval - 
    424720 
     721    float getDetectorAmplificationGain(int instrumentIndex, int detectorIndex); 
    425722    float getDetectorGain(int instrumentIndex, int detectorIndex); 
    426723    string getDetectorID(int instrumentIndex, int detectorIndex); 
     
    431728    string getDetectorType(int instrumentIndex, int detectorIndex); 
    432729    float getDetectorVoltage(int instrumentIndex, int detectorIndex); 
     730    float getDetectorZoom(int instrumentIndex, int detectorIndex); 
    433731 
    434732    // - DetectorSettings property retrieval - 
    435733 
     734    string getDetectorSettingsBinning(int imageIndex, int logicalChannelIndex); 
    436735    string getDetectorSettingsDetector(int imageIndex, int logicalChannelIndex); 
    437736    float getDetectorSettingsGain(int imageIndex, int logicalChannelIndex); 
    438737    float getDetectorSettingsOffset(int imageIndex, int logicalChannelIndex); 
     738    float getDetectorSettingsReadOutRate(int imageIndex, int logicalChannelIndex); 
     739    float getDetectorSettingsVoltage(int imageIndex, int logicalChannelIndex); 
     740 
     741    // - Dichroic property retrieval - 
     742 
     743    string getDichroicID(int instrumentIndex, int dichroicIndex); 
     744    string getDichroicLotNumber(int instrumentIndex, int dichroicIndex); 
     745    string getDichroicManufacturer(int instrumentIndex, int dichroicIndex); 
     746    string getDichroicModel(int instrumentIndex, int dichroicIndex); 
    439747 
    440748    // - Dimensions property retrieval - 
     
    449757    // - DisplayOptions property retrieval - 
    450758 
     759    string getDisplayOptionsDisplay(int imageIndex); 
    451760    string getDisplayOptionsID(int imageIndex); 
    452761    float getDisplayOptionsZoom(int imageIndex); 
    453762 
    454     // - DisplayOptionsProjection property retrieval - 
    455  
    456     int getDisplayOptionsProjectionZStart(int imageIndex); 
    457     int getDisplayOptionsProjectionZStop(int imageIndex); 
    458  
    459     // - DisplayOptionsTime property retrieval - 
    460  
    461     int getDisplayOptionsTimeTStart(int imageIndex); 
    462     int getDisplayOptionsTimeTStop(int imageIndex); 
     763    // - Ellipse property retrieval - 
     764 
     765    string getEllipseCx(int imageIndex, int roiIndex, int shapeIndex); 
     766    string getEllipseCy(int imageIndex, int roiIndex, int shapeIndex); 
     767    string getEllipseID(int imageIndex, int roiIndex, int shapeIndex); 
     768    string getEllipseRx(int imageIndex, int roiIndex, int shapeIndex); 
     769    string getEllipseRy(int imageIndex, int roiIndex, int shapeIndex); 
     770    string getEllipseTransform(int imageIndex, int roiIndex, int shapeIndex); 
     771 
     772    // - EmFilter property retrieval - 
     773 
     774    string getEmFilterLotNumber(int instrumentIndex, int filterIndex); 
     775    string getEmFilterManufacturer(int instrumentIndex, int filterIndex); 
     776    string getEmFilterModel(int instrumentIndex, int filterIndex); 
     777    string getEmFilterType(int instrumentIndex, int filterIndex); 
     778 
     779    // - ExFilter property retrieval - 
     780 
     781    string getExFilterLotNumber(int instrumentIndex, int filterIndex); 
     782    string getExFilterManufacturer(int instrumentIndex, int filterIndex); 
     783    string getExFilterModel(int instrumentIndex, int filterIndex); 
     784    string getExFilterType(int instrumentIndex, int filterIndex); 
    463785 
    464786    // - Experiment property retrieval - 
    465787 
    466788    string getExperimentDescription(int experimentIndex); 
     789    string getExperimentExperimenterRef(int experimentIndex); 
    467790    string getExperimentID(int experimentIndex); 
    468791    string getExperimentType(int experimentIndex); 
     
    475798    string getExperimenterInstitution(int experimenterIndex); 
    476799    string getExperimenterLastName(int experimenterIndex); 
     800    string getExperimenterOMEName(int experimenterIndex); 
    477801 
    478802    // - ExperimenterMembership property retrieval - 
     
    484808    string getFilamentType(int instrumentIndex, int lightSourceIndex); 
    485809 
     810    // - Filter property retrieval - 
     811 
     812    string getFilterFilterWheel(int instrumentIndex, int filterIndex); 
     813    string getFilterID(int instrumentIndex, int filterIndex); 
     814    string getFilterLotNumber(int instrumentIndex, int filterIndex); 
     815    string getFilterManufacturer(int instrumentIndex, int filterIndex); 
     816    string getFilterModel(int instrumentIndex, int filterIndex); 
     817    string getFilterType(int instrumentIndex, int filterIndex); 
     818 
     819    // - FilterSet property retrieval - 
     820 
     821    string getFilterSetDichroic(int instrumentIndex, int filterSetIndex); 
     822    string getFilterSetEmFilter(int instrumentIndex, int filterSetIndex); 
     823    string getFilterSetExFilter(int instrumentIndex, int filterSetIndex); 
     824    string getFilterSetID(int instrumentIndex, int filterSetIndex); 
     825    string getFilterSetLotNumber(int instrumentIndex, int filterSetIndex); 
     826    string getFilterSetManufacturer(int instrumentIndex, int filterSetIndex); 
     827    string getFilterSetModel(int instrumentIndex, int filterSetIndex); 
     828 
     829    // - Group property retrieval - 
     830 
     831    string getGroupID(int groupIndex); 
     832    string getGroupName(int groupIndex); 
     833 
    486834    // - GroupRef property retrieval - 
    487835 
     
    489837    // - Image property retrieval - 
    490838 
     839    string getImageAcquiredPixels(int imageIndex); 
    491840    string getImageCreationDate(int imageIndex); 
    492841    string getImageDefaultPixels(int imageIndex); 
    493842    string getImageDescription(int imageIndex); 
     843    string getImageExperimentRef(int imageIndex); 
     844    string getImageExperimenterRef(int imageIndex); 
     845    string getImageGroupRef(int imageIndex); 
    494846    string getImageID(int imageIndex); 
    495847    string getImageInstrumentRef(int imageIndex); 
     
    511863    int getLaserFrequencyMultiplication(int instrumentIndex, int lightSourceIndex); 
    512864    string getLaserLaserMedium(int instrumentIndex, int lightSourceIndex); 
     865    bool getLaserPockelCell(int instrumentIndex, int lightSourceIndex); 
    513866    string getLaserPulse(int instrumentIndex, int lightSourceIndex); 
     867    bool getLaserRepetitionRate(int instrumentIndex, int lightSourceIndex); 
    514868    bool getLaserTuneable(int instrumentIndex, int lightSourceIndex); 
    515869    string getLaserType(int instrumentIndex, int lightSourceIndex); 
     
    524878    string getLightSourceSerialNumber(int instrumentIndex, int lightSourceIndex); 
    525879 
     880    // - LightSourceRef property retrieval - 
     881 
     882    float getLightSourceRefAttenuation(int imageIndex, int microbeamManipulationIndex, int lightSourceRefIndex); 
     883    string getLightSourceRefLightSource(int imageIndex, int microbeamManipulationIndex, int lightSourceRefIndex); 
     884    int getLightSourceRefWavelength(int imageIndex, int microbeamManipulationIndex, int lightSourceRefIndex); 
     885 
    526886    // - LightSourceSettings property retrieval - 
    527887 
     
    530890    int getLightSourceSettingsWavelength(int imageIndex, int logicalChannelIndex); 
    531891 
     892    // - Line property retrieval - 
     893 
     894    string getLineID(int imageIndex, int roiIndex, int shapeIndex); 
     895    string getLineTransform(int imageIndex, int roiIndex, int shapeIndex); 
     896    string getLineX1(int imageIndex, int roiIndex, int shapeIndex); 
     897    string getLineX2(int imageIndex, int roiIndex, int shapeIndex); 
     898    string getLineY1(int imageIndex, int roiIndex, int shapeIndex); 
     899    string getLineY2(int imageIndex, int roiIndex, int shapeIndex); 
     900 
    532901    // - LogicalChannel property retrieval - 
    533902 
    534903    string getLogicalChannelContrastMethod(int imageIndex, int logicalChannelIndex); 
     904    string getLogicalChannelDetector(int imageIndex, int logicalChannelIndex); 
    535905    int getLogicalChannelEmWave(int imageIndex, int logicalChannelIndex); 
    536906    int getLogicalChannelExWave(int imageIndex, int logicalChannelIndex); 
     907    string getLogicalChannelFilterSet(int imageIndex, int logicalChannelIndex); 
    537908    string getLogicalChannelFluor(int imageIndex, int logicalChannelIndex); 
    538909    string getLogicalChannelID(int imageIndex, int logicalChannelIndex); 
    539910    string getLogicalChannelIlluminationType(int imageIndex, int logicalChannelIndex); 
     911    string getLogicalChannelLightSource(int imageIndex, int logicalChannelIndex); 
    540912    string getLogicalChannelMode(int imageIndex, int logicalChannelIndex); 
    541913    string getLogicalChannelName(int imageIndex, int logicalChannelIndex); 
     
    546918    int getLogicalChannelPockelCellSetting(int imageIndex, int logicalChannelIndex); 
    547919    int getLogicalChannelSamplesPerPixel(int imageIndex, int logicalChannelIndex); 
     920    string getLogicalChannelSecondaryEmissionFilter(int imageIndex, int logicalChannelIndex); 
     921    string getLogicalChannelSecondaryExcitationFilter(int imageIndex, int logicalChannelIndex); 
     922 
     923    // - Mask property retrieval - 
     924 
     925    string getMaskHeight(int imageIndex, int roiIndex, int shapeIndex); 
     926    string getMaskID(int imageIndex, int roiIndex, int shapeIndex); 
     927    string getMaskTransform(int imageIndex, int roiIndex, int shapeIndex); 
     928    string getMaskWidth(int imageIndex, int roiIndex, int shapeIndex); 
     929    string getMaskX(int imageIndex, int roiIndex, int shapeIndex); 
     930    string getMaskY(int imageIndex, int roiIndex, int shapeIndex); 
     931 
     932    // - MaskPixels property retrieval - 
     933 
     934    bool getMaskPixelsBigEndian(int imageIndex, int roiIndex, int shapeIndex); 
     935    string getMaskPixelsBinData(int imageIndex, int roiIndex, int shapeIndex); 
     936    string getMaskPixelsExtendedPixelType(int imageIndex, int roiIndex, int shapeIndex); 
     937    string getMaskPixelsID(int imageIndex, int roiIndex, int shapeIndex); 
     938    int getMaskPixelsSizeX(int imageIndex, int roiIndex, int shapeIndex); 
     939    int getMaskPixelsSizeY(int imageIndex, int roiIndex, int shapeIndex); 
     940 
     941    // - MicrobeamManipulation property retrieval - 
     942 
     943    string getMicrobeamManipulationExperimenterRef(int imageIndex, int microbeamManipulationIndex); 
     944    string getMicrobeamManipulationID(int imageIndex, int microbeamManipulationIndex); 
     945    string getMicrobeamManipulationType(int imageIndex, int microbeamManipulationIndex); 
     946 
     947    // - MicrobeamManipulationRef property retrieval - 
     948 
     949    string getMicrobeamManipulationRefID(int experimentIndex, int microbeamManipulationRefIndex); 
     950 
     951    // - Microscope property retrieval - 
     952 
     953    string getMicroscopeID(int instrumentIndex); 
     954    string getMicroscopeManufacturer(int instrumentIndex); 
     955    string getMicroscopeModel(int instrumentIndex); 
     956    string getMicroscopeSerialNumber(int instrumentIndex); 
     957    string getMicroscopeType(int instrumentIndex); 
    548958 
    549959    // - OTF property retrieval - 
    550960 
     961    string getOTFBinaryFile(int instrumentIndex, int otfIndex); 
    551962    string getOTFID(int instrumentIndex, int otfIndex); 
    552963    string getOTFObjective(int instrumentIndex, int otfIndex); 
     
    562973    string getObjectiveID(int instrumentIndex, int objectiveIndex); 
    563974    string getObjectiveImmersion(int instrumentIndex, int objectiveIndex); 
     975    bool getObjectiveIris(int instrumentIndex, int objectiveIndex); 
    564976    float getObjectiveLensNA(int instrumentIndex, int objectiveIndex); 
    565977    string getObjectiveManufacturer(int instrumentIndex, int objectiveIndex); 
     
    568980    string getObjectiveSerialNumber(int instrumentIndex, int objectiveIndex); 
    569981    float getObjectiveWorkingDistance(int instrumentIndex, int objectiveIndex); 
     982 
     983    // - ObjectiveSettings property retrieval - 
     984 
     985    float getObjectiveSettingsCorrectionCollar(int imageIndex); 
     986    string getObjectiveSettingsMedium(int imageIndex); 
     987    string getObjectiveSettingsObjective(int imageIndex); 
     988    float getObjectiveSettingsRefractiveIndex(int imageIndex); 
     989 
     990    // - Path property retrieval - 
     991 
     992    string getPathD(int imageIndex, int roiIndex, int shapeIndex); 
     993    string getPathID(int imageIndex, int roiIndex, int shapeIndex); 
    570994 
    571995    // - Pixels property retrieval - 
     
    5831007    // - Plane property retrieval - 
    5841008 
     1009    string getPlaneHashSHA1(int imageIndex, int pixelsIndex, int planeIndex); 
     1010    string getPlaneID(int imageIndex, int pixelsIndex, int planeIndex); 
    5851011    int getPlaneTheC(int imageIndex, int pixelsIndex, int planeIndex); 
    5861012    int getPlaneTheT(int imageIndex, int pixelsIndex, int planeIndex); 
     
    5941020    // - Plate property retrieval - 
    5951021 
     1022    string getPlateColumnNamingConvention(int plateIndex); 
    5961023    string getPlateDescription(int plateIndex); 
    5971024    string getPlateExternalIdentifier(int plateIndex); 
    5981025    string getPlateID(int plateIndex); 
    5991026    string getPlateName(int plateIndex); 
     1027    string getPlateRowNamingConvention(int plateIndex); 
    6001028    string getPlateStatus(int plateIndex); 
     1029    double getPlateWellOriginX(int plateIndex); 
     1030    double getPlateWellOriginY(int plateIndex); 
    6011031 
    6021032    // - PlateRef property retrieval - 
    6031033 
    6041034    string getPlateRefID(int screenIndex, int plateRefIndex); 
     1035    int getPlateRefSample(int screenIndex, int plateRefIndex); 
     1036    string getPlateRefWell(int screenIndex, int plateRefIndex); 
     1037 
     1038    // - Point property retrieval - 
     1039 
     1040    string getPointCx(int imageIndex, int roiIndex, int shapeIndex); 
     1041    string getPointCy(int imageIndex, int roiIndex, int shapeIndex); 
     1042    string getPointID(int imageIndex, int roiIndex, int shapeIndex); 
     1043    string getPointR(int imageIndex, int roiIndex, int shapeIndex); 
     1044    string getPointTransform(int imageIndex, int roiIndex, int shapeIndex); 
     1045 
     1046    // - Polygon property retrieval - 
     1047 
     1048    string getPolygonID(int imageIndex, int roiIndex, int shapeIndex); 
     1049    string getPolygonPoints(int imageIndex, int roiIndex, int shapeIndex); 
     1050    string getPolygonTransform(int imageIndex, int roiIndex, int shapeIndex); 
     1051 
     1052    // - Polyline property retrieval - 
     1053 
     1054    string getPolylineID(int imageIndex, int roiIndex, int shapeIndex); 
     1055    string getPolylinePoints(int imageIndex, int roiIndex, int shapeIndex); 
     1056    string getPolylineTransform(int imageIndex, int roiIndex, int shapeIndex); 
     1057 
     1058    // - Project property retrieval - 
     1059 
     1060    string getProjectDescription(int projectIndex); 
     1061    string getProjectExperimenterRef(int projectIndex); 
     1062    string getProjectGroupRef(int projectIndex); 
     1063    string getProjectID(int projectIndex); 
     1064    string getProjectName(int projectIndex); 
     1065 
     1066    // - ProjectRef property retrieval - 
     1067 
     1068    string getProjectRefID(int datasetIndex, int projectRefIndex); 
     1069 
     1070    // - Pump property retrieval - 
     1071 
     1072    string getPumpLightSource(int instrumentIndex, int lightSourceIndex); 
    6051073 
    6061074    // - ROI property retrieval - 
     
    6161084    int getROIZ1(int imageIndex, int roiIndex); 
    6171085 
     1086    // - ROIRef property retrieval - 
     1087 
     1088    string getROIRefID(int imageIndex, int microbeamManipulationIndex, int roiRefIndex); 
     1089 
    6181090    // - Reagent property retrieval - 
    6191091 
     
    6231095    string getReagentReagentIdentifier(int screenIndex, int reagentIndex); 
    6241096 
     1097    // - Rect property retrieval - 
     1098 
     1099    string getRectHeight(int imageIndex, int roiIndex, int shapeIndex); 
     1100    string getRectID(int imageIndex, int roiIndex, int shapeIndex); 
     1101    string getRectTransform(int imageIndex, int roiIndex, int shapeIndex); 
     1102    string getRectWidth(int imageIndex, int roiIndex, int shapeIndex); 
     1103    string getRectX(int imageIndex, int roiIndex, int shapeIndex); 
     1104    string getRectY(int imageIndex, int roiIndex, int shapeIndex); 
     1105 
     1106    // - Region property retrieval - 
     1107 
     1108    string getRegionID(int imageIndex, int regionIndex); 
     1109    string getRegionName(int imageIndex, int regionIndex); 
     1110    string getRegionTag(int imageIndex, int regionIndex); 
     1111 
     1112    // - RoiLink property retrieval - 
     1113 
     1114    string getRoiLinkDirection(int imageIndex, int roiIndex, int roiLinkIndex); 
     1115    string getRoiLinkName(int imageIndex, int roiIndex, int roiLinkIndex); 
     1116    string getRoiLinkRef(int imageIndex, int roiIndex, int roiLinkIndex); 
     1117 
    6251118    // - Screen property retrieval - 
    6261119 
     1120    string getScreenDescription(int screenIndex); 
     1121    string getScreenExtern(int screenIndex); 
    6271122    string getScreenID(int screenIndex); 
    6281123    string getScreenName(int screenIndex); 
     
    6301125    string getScreenProtocolIdentifier(int screenIndex); 
    6311126    string getScreenReagentSetDescription(int screenIndex); 
     1127    string getScreenReagentSetIdentifier(int screenIndex); 
    6321128    string getScreenType(int screenIndex); 
    6331129 
     
    6371133    string getScreenAcquisitionID(int screenIndex, int screenAcquisitionIndex); 
    6381134    string getScreenAcquisitionStartTime(int screenIndex, int screenAcquisitionIndex); 
     1135 
     1136    // - ScreenRef property retrieval - 
     1137 
     1138    string getScreenRefID(int plateIndex, int screenRefIndex); 
     1139 
     1140    // - Shape property retrieval - 
     1141 
     1142    string getShapeBaselineShift(int imageIndex, int roiIndex, int shapeIndex); 
     1143    string getShapeDirection(int imageIndex, int roiIndex, int shapeIndex); 
     1144    string getShapeFillColor(int imageIndex, int roiIndex, int shapeIndex); 
     1145    string getShapeFillOpacity(int imageIndex, int roiIndex, int shapeIndex); 
     1146    string getShapeFillRule(int imageIndex, int roiIndex, int shapeIndex); 
     1147    string getShapeFontFamily(int imageIndex, int roiIndex, int shapeIndex); 
     1148    int getShapeFontSize(int imageIndex, int roiIndex, int shapeIndex); 
     1149    string getShapeFontStretch(int imageIndex, int roiIndex, int shapeIndex); 
     1150    string getShapeFontStyle(int imageIndex, int roiIndex, int shapeIndex); 
     1151    string getShapeFontVariant(int imageIndex, int roiIndex, int shapeIndex); 
     1152    string getShapeFontWeight(int imageIndex, int roiIndex, int shapeIndex); 
     1153    string getShapeG(int imageIndex, int roiIndex, int shapeIndex); 
     1154    int getShapeGlyphOrientationVertical(int imageIndex, int roiIndex, int shapeIndex); 
     1155    string getShapeID(int imageIndex, int roiIndex, int shapeIndex); 
     1156    bool getShapeLocked(int imageIndex, int roiIndex, int shapeIndex); 
     1157    string getShapeStrokeAttribute(int imageIndex, int roiIndex, int shapeIndex); 
     1158    string getShapeStrokeColor(int imageIndex, int roiIndex, int shapeIndex); 
     1159    string getShapeStrokeDashArray(int imageIndex, int roiIndex, int shapeIndex); 
     1160    string getShapeStrokeLineCap(int imageIndex, int roiIndex, int shapeIndex); 
     1161    string getShapeStrokeLineJoin(int imageIndex, int roiIndex, int shapeIndex); 
     1162    int getShapeStrokeMiterLimit(int imageIndex, int roiIndex, int shapeIndex); 
     1163    float getShapeStrokeOpacity(int imageIndex, int roiIndex, int shapeIndex); 
     1164    int getShapeStrokeWidth(int imageIndex, int roiIndex, int shapeIndex); 
     1165    string getShapeText(int imageIndex, int roiIndex, int shapeIndex); 
     1166    string getShapeTextAnchor(int imageIndex, int roiIndex, int shapeIndex); 
     1167    string getShapeTextDecoration(int imageIndex, int roiIndex, int shapeIndex); 
     1168    string getShapeTextFill(int imageIndex, int roiIndex, int shapeIndex); 
     1169    string getShapeTextStroke(int imageIndex, int roiIndex, int shapeIndex); 
     1170    int getShapeTheT(int imageIndex, int roiIndex, int shapeIndex); 
     1171    int getShapeTheZ(int imageIndex, int roiIndex, int shapeIndex); 
     1172    string getShapeVectorEffect(int imageIndex, int roiIndex, int shapeIndex); 
     1173    bool getShapeVisibility(int imageIndex, int roiIndex, int shapeIndex); 
     1174    string getShapeWritingMode(int imageIndex, int roiIndex, int shapeIndex); 
    6391175 
    6401176    // - StageLabel property retrieval - 
     
    6501186    float getStagePositionPositionY(int imageIndex, int pixelsIndex, int planeIndex); 
    6511187    float getStagePositionPositionZ(int imageIndex, int pixelsIndex, int planeIndex); 
     1188 
     1189    // - Thumbnail property retrieval - 
     1190 
     1191    string getThumbnailHref(int imageIndex); 
     1192    string getThumbnailID(int imageIndex); 
     1193    string getThumbnailMIMEtype(int imageIndex); 
    6521194 
    6531195    // - TiffData property retrieval - 
     
    6611203    string getTiffDataUUID(int imageIndex, int pixelsIndex, int tiffDataIndex); 
    6621204 
     1205    // - TransmittanceRange property retrieval - 
     1206 
     1207    int getTransmittanceRangeCutIn(int instrumentIndex, int filterIndex); 
     1208    int getTransmittanceRangeCutInTolerance(int instrumentIndex, int filterIndex); 
     1209    int getTransmittanceRangeCutOut(int instrumentIndex, int filterIndex); 
     1210    int getTransmittanceRangeCutOutTolerance(int instrumentIndex, int filterIndex); 
     1211    int getTransmittanceRangeTransmittance(int instrumentIndex, int filterIndex); 
     1212 
    6631213    // - Well property retrieval - 
    6641214 
     
    6671217    string getWellExternalIdentifier(int plateIndex, int wellIndex); 
    6681218    string getWellID(int plateIndex, int wellIndex); 
     1219    string getWellReagent(int plateIndex, int wellIndex); 
    6691220    int getWellRow(int plateIndex, int wellIndex); 
    6701221    string getWellType(int plateIndex, int wellIndex); 
     
    6731224 
    6741225    string getWellSampleID(int plateIndex, int wellIndex, int wellSampleIndex); 
     1226    string getWellSampleImageRef(int plateIndex, int wellIndex, int wellSampleIndex); 
    6751227    int getWellSampleIndex(int plateIndex, int wellIndex, int wellSampleIndex); 
    6761228    float getWellSamplePosX(int plateIndex, int wellIndex, int wellSampleIndex); 
    6771229    float getWellSamplePosY(int plateIndex, int wellIndex, int wellSampleIndex); 
    6781230    int getWellSampleTimepoint(int plateIndex, int wellIndex, int wellSampleIndex); 
     1231 
     1232    // - WellSampleRef property retrieval - 
     1233 
     1234    string getWellSampleRefID(int screenIndex, int screenAcquisitionIndex, int wellSampleRefIndex); 
    6791235  }; 
    6801236}; 
Note: See TracChangeset for help on using the changeset viewer.