Changeset 6925

Timestamp:

09/14/10 15:48:19 (9 years ago)

Author:

curtis

Message:

Fix up license for curve-fitter project.

Location:

branches/maven/projects/curve-fitter

Files:

• LICENSE.txt (added)
• pom.xml (modified) (1 diff)
• src/main/java/loci/curvefitter/AbstractCurveFitter.java (modified) (1 diff)
• src/main/java/loci/curvefitter/AkutanCurveFitter.java (modified) (2 diffs)
• src/main/java/loci/curvefitter/CurveFitData.java (modified) (1 diff)
• src/main/java/loci/curvefitter/GrayCurveFitter.java (modified) (2 diffs)
• src/main/java/loci/curvefitter/GrayNRCurveFitter.java (modified) (2 diffs)
• src/main/java/loci/curvefitter/ICurveFitData.java (modified) (1 diff)
• src/main/java/loci/curvefitter/ICurveFitter.java (modified) (1 diff)
• src/main/java/loci/curvefitter/JaolhoCurveFitter.java (modified) (2 diffs)
• src/main/java/loci/curvefitter/MarkwardtCurveFitter.java (modified) (2 diffs)
• src/main/java/loci/curvefitter/SLIMCurveFitter.java (modified) (1 diff)

branches/maven/projects/curve-fitter/pom.xml

@@ -23 +23 @@
     <license>
       <name>BSD</name>
+      <url>http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/LICENSE.txt</url>
       <distribution>repo</distribution>
     </license>

branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/AbstractCurveFitter.java

@@ -1 @@
-package loci.curvefitter;
+//
+// AbstractCurveFitter.java
+//
 
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Curve Fitter library for fitting exponential decay curves.
+
+Copyright (c) 2010, UW-Madison LOCI
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+    * Redistributions of source code must retain the above copyright
+      notice, this list of conditions and the following disclaimer.
+    * Redistributions in binary form must reproduce the above copyright
+      notice, this list of conditions and the following disclaimer in the
+      documentation and/or other materials provided with the distribution.
+    * Neither the name of the UW-Madison LOCI nor the
+      names of its contributors may be used to endorse or promote products
+      derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGE.
+*/
+
+package loci.curvefitter;
 
 /**
  * Abstract base class for curve fitters.
  *
- * @author Aivar Grislis
+ * <dl><dt><b>Source code:</b></dt>
+ * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AbstractCurveFitter.java">Trac</a>,
+ * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AbstractCurveFitter.java">SVN</a></dd></dl>
+ *
+ * @author Aivar Grislis grislis at wisc.edu
  */
 public abstract class AbstractCurveFitter implements ICurveFitter {

branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/AkutanCurveFitter.java

@@ +1 @@
+//
+// AkutanCurveFitter.java
+//
+
+/*
+Curve Fitter library for fitting exponential decay curves.
+
+Copyright (c) 2010, UW-Madison LOCI
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+    * Redistributions of source code must retain the above copyright
+      notice, this list of conditions and the following disclaimer.
+    * Redistributions in binary form must reproduce the above copyright
+      notice, this list of conditions and the following disclaimer in the
+      documentation and/or other materials provided with the distribution.
+    * Neither the name of the UW-Madison LOCI nor the
+      names of its contributors may be used to endorse or promote products
+      derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGE.
+*/
+
 package loci.curvefitter;
 
-/*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
 import cern.colt.matrix.DoubleFactory1D;
 import cern.colt.matrix.DoubleFactory2D;
@@ -16 +46 @@
 
 /**
+ * TODO
  *
- * @author Aivar Grislis
+ * <dl><dt><b>Source code:</b></dt>
+ * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AkutanCurveFitter.java">Trac</a>,
+ * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AkutanCurveFitter.java">SVN</a></dd></dl>
+ *
+ * @author Aivar Grislis grislis at wisc.edu
  */
 public class AkutanCurveFitter extends AbstractCurveFitter {

branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/CurveFitData.java

@@ +1 @@
+//
+// CurveFitData.java
+//
+
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Curve Fitter library for fitting exponential decay curves.
+
+Copyright (c) 2010, UW-Madison LOCI
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+    * Redistributions of source code must retain the above copyright
+      notice, this list of conditions and the following disclaimer.
+    * Redistributions in binary form must reproduce the above copyright
+      notice, this list of conditions and the following disclaimer in the
+      documentation and/or other materials provided with the distribution.
+    * Neither the name of the UW-Madison LOCI nor the
+      names of its contributors may be used to endorse or promote products
+      derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGE.
+*/
 
 package loci.curvefitter;
 
 /**
+ * TODO
  *
- * @author aivar
+ * <dl><dt><b>Source code:</b></dt>
+ * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/CurveFitData.java">Trac</a>,
+ * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/CurveFitData.java">SVN</a></dd></dl>
+ *
+ * @author Aivar Grislis grislis at wisc.edu
  */
 public class CurveFitData implements ICurveFitData {

branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/GrayCurveFitter.java

@@ +1 @@
+//
+// GrayCurveFitter.java
+//
+
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Curve Fitter library for fitting exponential decay curves.
+
+Copyright (c) 2010, UW-Madison LOCI
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+    * Redistributions of source code must retain the above copyright
+      notice, this list of conditions and the following disclaimer.
+    * Redistributions in binary form must reproduce the above copyright
+      notice, this list of conditions and the following disclaimer in the
+      documentation and/or other materials provided with the distribution.
+    * Neither the name of the UW-Madison LOCI nor the
+      names of its contributors may be used to endorse or promote products
+      derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGE.
+*/
 
 package loci.curvefitter;
@@ -12 +41 @@
 
 /**
+ * TODO
  *
- * @author aivar
+ * <dl><dt><b>Source code:</b></dt>
+ * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayCurveFitter.java">Trac</a>,
+ * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayCurveFitter.java">SVN</a></dd></dl>
+ *
+ * @author Aivar Grislis grislis at wisc.edu
  */
 public class GrayCurveFitter extends AbstractCurveFitter {

branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/GrayNRCurveFitter.java

@@ +1 @@
+//
+// GrayNRCurveFitter.java
+//
+
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Curve Fitter library for fitting exponential decay curves.
+
+Copyright (c) 2010, UW-Madison LOCI
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+    * Redistributions of source code must retain the above copyright
+      notice, this list of conditions and the following disclaimer.
+    * Redistributions in binary form must reproduce the above copyright
+      notice, this list of conditions and the following disclaimer in the
+      documentation and/or other materials provided with the distribution.
+    * Neither the name of the UW-Madison LOCI nor the
+      names of its contributors may be used to endorse or promote products
+      derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGE.
+*/
 
 package loci.curvefitter;
@@ -13 +42 @@
 
 /**
+ * TODO
  *
- * @author aivar
+ * <dl><dt><b>Source code:</b></dt>
+ * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayNRCurveFitter.java">Trac</a>,
+ * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayNRCurveFitter.java">SVN</a></dd></dl>
+ *
+ * @author Aivar Grislis grislis at wisc.edu
  */
 public class GrayNRCurveFitter extends AbstractCurveFitter {

branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitData.java

@@ -1 @@
-package loci.curvefitter;
+//
+// ICurveFitData.java
+//
 
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Curve Fitter library for fitting exponential decay curves.
+
+Copyright (c) 2010, UW-Madison LOCI
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+    * Redistributions of source code must retain the above copyright
+      notice, this list of conditions and the following disclaimer.
+    * Redistributions in binary form must reproduce the above copyright
+      notice, this list of conditions and the following disclaimer in the
+      documentation and/or other materials provided with the distribution.
+    * Neither the name of the UW-Madison LOCI nor the
+      names of its contributors may be used to endorse or promote products
+      derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGE.
+*/
+
+package loci.curvefitter;
 
 /**
  * Interface to the curve fitting data.
  *
- * @author Aivar Grislis
+ * <dl><dt><b>Source code:</b></dt>
+ * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitData.java">Trac</a>,
+ * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitData.java">SVN</a></dd></dl>
+ *
+ * @author Aivar Grislis grislis at wisc.edu
  */
 //TODO fix params

branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitter.java

@@ +1 @@
+//
+// ICurveFitter.java
+//
+
+/*
+Curve Fitter library for fitting exponential decay curves.
+
+Copyright (c) 2010, UW-Madison LOCI
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+    * Redistributions of source code must retain the above copyright
+      notice, this list of conditions and the following disclaimer.
+    * Redistributions in binary form must reproduce the above copyright
+      notice, this list of conditions and the following disclaimer in the
+      documentation and/or other materials provided with the distribution.
+    * Neither the name of the UW-Madison LOCI nor the
+      names of its contributors may be used to endorse or promote products
+      derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGE.
+*/
+
 package loci.curvefitter;
 
-/*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
-
 /**
- *
  * Interface for a curve fitter.
  *
- * @author Aivar Grislis
+ * <dl><dt><b>Source code:</b></dt>
+ * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitter.java">Trac</a>,
+ * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitter.java">SVN</a></dd></dl>
+ *
+ * @author Aivar Grislis grislis at wisc.edu
  */
 //TODO max iterations; c/b used in lieu of 'iterate()'??

branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/JaolhoCurveFitter.java

@@ +1 @@
+//
+// JaolhoCurveFitter.java
+//
+
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Curve Fitter library for fitting exponential decay curves.
+
+Copyright (c) 2010, UW-Madison LOCI
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+    * Redistributions of source code must retain the above copyright
+      notice, this list of conditions and the following disclaimer.
+    * Redistributions in binary form must reproduce the above copyright
+      notice, this list of conditions and the following disclaimer in the
+      documentation and/or other materials provided with the distribution.
+    * Neither the name of the UW-Madison LOCI nor the
+      names of its contributors may be used to endorse or promote products
+      derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGE.
+*/
 
 package loci.curvefitter;
@@ -10 +39 @@
 
 /**
+ * TODO
  *
- * @author Aivar Grislis
+ * <dl><dt><b>Source code:</b></dt>
+ * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/JaolhoCurveFitter.java">Trac</a>,
+ * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/JaolhoCurveFitter.java">SVN</a></dd></dl>
+ *
+ * @author Aivar Grislis grislis at wisc.edu
  */
 public class JaolhoCurveFitter extends AbstractCurveFitter {

branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/MarkwardtCurveFitter.java

@@ +1 @@
+//
+// MarkwardtCurveFitter.java
+//
+
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Curve Fitter library for fitting exponential decay curves.
+
+Copyright (c) 2010, UW-Madison LOCI
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+    * Redistributions of source code must retain the above copyright
+      notice, this list of conditions and the following disclaimer.
+    * Redistributions in binary form must reproduce the above copyright
+      notice, this list of conditions and the following disclaimer in the
+      documentation and/or other materials provided with the distribution.
+    * Neither the name of the UW-Madison LOCI nor the
+      names of its contributors may be used to endorse or promote products
+      derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGE.
+*/
 
 package loci.curvefitter;
@@ -12 +41 @@
 
 /**
+ * TODO
  *
- * @author aivar
+ * <dl><dt><b>Source code:</b></dt>
+ * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/MarkwardtCurveFitter.java">Trac</a>,
+ * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/MarkwardtCurveFitter.java">SVN</a></dd></dl>
+ *
+ * @author Aivar Grislis grislis at wisc.edu
  */
 public class MarkwardtCurveFitter extends AbstractCurveFitter {

branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/SLIMCurveFitter.java

@@ +1 @@
+//
+// SLIMCurveFitter.java
+//
+
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Curve Fitter library for fitting exponential decay curves.
+
+Copyright (c) 2010, UW-Madison LOCI
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+    * Redistributions of source code must retain the above copyright
+      notice, this list of conditions and the following disclaimer.
+    * Redistributions in binary form must reproduce the above copyright
+      notice, this list of conditions and the following disclaimer in the
+      documentation and/or other materials provided with the distribution.
+    * Neither the name of the UW-Madison LOCI nor the
+      names of its contributors may be used to endorse or promote products
+      derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGE.
+*/
 
 package loci.curvefitter;
 
 /**
+ * TODO
  *
- * @author aivar
+ * <dl><dt><b>Source code:</b></dt>
+ * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/SLIMCurveFitter.java">Trac</a>,
+ * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/SLIMCurveFitter.java">SVN</a></dd></dl>
+ *
+ * @author Aivar Grislis grislis at wisc.edu
  */
 public class SLIMCurveFitter {