Changeset 6925


Ignore:
Timestamp:
09/14/10 15:48:19 (9 years ago)
Author:
curtis
Message:

Fix up license for curve-fitter project.

Location:
branches/maven/projects/curve-fitter
Files:
1 added
11 edited

Legend:

Unmodified
Added
Removed
  • branches/maven/projects/curve-fitter/pom.xml

    r6907 r6925  
    2323    <license> 
    2424      <name>BSD</name> 
     25      <url>http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/LICENSE.txt</url> 
    2526      <distribution>repo</distribution> 
    2627    </license> 
  • branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/AbstractCurveFitter.java

    r6898 r6925  
    1 package loci.curvefitter; 
     1// 
     2// AbstractCurveFitter.java 
     3// 
    24 
    35/* 
    4  * To change this template, choose Tools | Templates 
    5  * and open the template in the editor. 
    6  */ 
     6Curve Fitter library for fitting exponential decay curves. 
     7 
     8Copyright (c) 2010, UW-Madison LOCI 
     9All rights reserved. 
     10 
     11Redistribution and use in source and binary forms, with or without 
     12modification, are permitted provided that the following conditions are met: 
     13    * Redistributions of source code must retain the above copyright 
     14      notice, this list of conditions and the following disclaimer. 
     15    * Redistributions in binary form must reproduce the above copyright 
     16      notice, this list of conditions and the following disclaimer in the 
     17      documentation and/or other materials provided with the distribution. 
     18    * Neither the name of the UW-Madison LOCI nor the 
     19      names of its contributors may be used to endorse or promote products 
     20      derived from this software without specific prior written permission. 
     21 
     22THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 
     23AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 
     24IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 
     25ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE 
     26LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 
     27CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF 
     28SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 
     29INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 
     30CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 
     31ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 
     32POSSIBILITY OF SUCH DAMAGE. 
     33*/ 
     34 
     35package loci.curvefitter; 
    736 
    837/** 
    938 * Abstract base class for curve fitters. 
    1039 * 
    11  * @author Aivar Grislis 
     40 * <dl><dt><b>Source code:</b></dt> 
     41 * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AbstractCurveFitter.java">Trac</a>, 
     42 * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AbstractCurveFitter.java">SVN</a></dd></dl> 
     43 * 
     44 * @author Aivar Grislis grislis at wisc.edu 
    1245 */ 
    1346public abstract class AbstractCurveFitter implements ICurveFitter { 
  • branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/AkutanCurveFitter.java

    r6898 r6925  
     1// 
     2// AkutanCurveFitter.java 
     3// 
     4 
     5/* 
     6Curve Fitter library for fitting exponential decay curves. 
     7 
     8Copyright (c) 2010, UW-Madison LOCI 
     9All rights reserved. 
     10 
     11Redistribution and use in source and binary forms, with or without 
     12modification, are permitted provided that the following conditions are met: 
     13    * Redistributions of source code must retain the above copyright 
     14      notice, this list of conditions and the following disclaimer. 
     15    * Redistributions in binary form must reproduce the above copyright 
     16      notice, this list of conditions and the following disclaimer in the 
     17      documentation and/or other materials provided with the distribution. 
     18    * Neither the name of the UW-Madison LOCI nor the 
     19      names of its contributors may be used to endorse or promote products 
     20      derived from this software without specific prior written permission. 
     21 
     22THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 
     23AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 
     24IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 
     25ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE 
     26LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 
     27CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF 
     28SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 
     29INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 
     30CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 
     31ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 
     32POSSIBILITY OF SUCH DAMAGE. 
     33*/ 
     34 
    135package loci.curvefitter; 
    236 
    3 /* 
    4  * To change this template, choose Tools | Templates 
    5  * and open the template in the editor. 
    6  */ 
    737import cern.colt.matrix.DoubleFactory1D; 
    838import cern.colt.matrix.DoubleFactory2D; 
     
    1646 
    1747/** 
     48 * TODO 
    1849 * 
    19  * @author Aivar Grislis 
     50 * <dl><dt><b>Source code:</b></dt> 
     51 * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AkutanCurveFitter.java">Trac</a>, 
     52 * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AkutanCurveFitter.java">SVN</a></dd></dl> 
     53 * 
     54 * @author Aivar Grislis grislis at wisc.edu 
    2055 */ 
    2156public class AkutanCurveFitter extends AbstractCurveFitter { 
  • branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/CurveFitData.java

    r6898 r6925  
     1// 
     2// CurveFitData.java 
     3// 
     4 
    15/* 
    2  * To change this template, choose Tools | Templates 
    3  * and open the template in the editor. 
    4  */ 
     6Curve Fitter library for fitting exponential decay curves. 
     7 
     8Copyright (c) 2010, UW-Madison LOCI 
     9All rights reserved. 
     10 
     11Redistribution and use in source and binary forms, with or without 
     12modification, are permitted provided that the following conditions are met: 
     13    * Redistributions of source code must retain the above copyright 
     14      notice, this list of conditions and the following disclaimer. 
     15    * Redistributions in binary form must reproduce the above copyright 
     16      notice, this list of conditions and the following disclaimer in the 
     17      documentation and/or other materials provided with the distribution. 
     18    * Neither the name of the UW-Madison LOCI nor the 
     19      names of its contributors may be used to endorse or promote products 
     20      derived from this software without specific prior written permission. 
     21 
     22THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 
     23AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 
     24IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 
     25ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE 
     26LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 
     27CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF 
     28SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 
     29INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 
     30CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 
     31ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 
     32POSSIBILITY OF SUCH DAMAGE. 
     33*/ 
    534 
    635package loci.curvefitter; 
    736 
    837/** 
     38 * TODO 
    939 * 
    10  * @author aivar 
     40 * <dl><dt><b>Source code:</b></dt> 
     41 * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/CurveFitData.java">Trac</a>, 
     42 * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/CurveFitData.java">SVN</a></dd></dl> 
     43 * 
     44 * @author Aivar Grislis grislis at wisc.edu 
    1145 */ 
    1246public class CurveFitData implements ICurveFitData { 
  • branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/GrayCurveFitter.java

    r6898 r6925  
     1// 
     2// GrayCurveFitter.java 
     3// 
     4 
    15/* 
    2  * To change this template, choose Tools | Templates 
    3  * and open the template in the editor. 
    4  */ 
     6Curve Fitter library for fitting exponential decay curves. 
     7 
     8Copyright (c) 2010, UW-Madison LOCI 
     9All rights reserved. 
     10 
     11Redistribution and use in source and binary forms, with or without 
     12modification, are permitted provided that the following conditions are met: 
     13    * Redistributions of source code must retain the above copyright 
     14      notice, this list of conditions and the following disclaimer. 
     15    * Redistributions in binary form must reproduce the above copyright 
     16      notice, this list of conditions and the following disclaimer in the 
     17      documentation and/or other materials provided with the distribution. 
     18    * Neither the name of the UW-Madison LOCI nor the 
     19      names of its contributors may be used to endorse or promote products 
     20      derived from this software without specific prior written permission. 
     21 
     22THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 
     23AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 
     24IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 
     25ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE 
     26LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 
     27CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF 
     28SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 
     29INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 
     30CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 
     31ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 
     32POSSIBILITY OF SUCH DAMAGE. 
     33*/ 
    534 
    635package loci.curvefitter; 
     
    1241 
    1342/** 
     43 * TODO 
    1444 * 
    15  * @author aivar 
     45 * <dl><dt><b>Source code:</b></dt> 
     46 * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayCurveFitter.java">Trac</a>, 
     47 * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayCurveFitter.java">SVN</a></dd></dl> 
     48 * 
     49 * @author Aivar Grislis grislis at wisc.edu 
    1650 */ 
    1751public class GrayCurveFitter extends AbstractCurveFitter { 
  • branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/GrayNRCurveFitter.java

    r6898 r6925  
     1// 
     2// GrayNRCurveFitter.java 
     3// 
     4 
    15/* 
    2  * To change this template, choose Tools | Templates 
    3  * and open the template in the editor. 
    4  */ 
     6Curve Fitter library for fitting exponential decay curves. 
     7 
     8Copyright (c) 2010, UW-Madison LOCI 
     9All rights reserved. 
     10 
     11Redistribution and use in source and binary forms, with or without 
     12modification, are permitted provided that the following conditions are met: 
     13    * Redistributions of source code must retain the above copyright 
     14      notice, this list of conditions and the following disclaimer. 
     15    * Redistributions in binary form must reproduce the above copyright 
     16      notice, this list of conditions and the following disclaimer in the 
     17      documentation and/or other materials provided with the distribution. 
     18    * Neither the name of the UW-Madison LOCI nor the 
     19      names of its contributors may be used to endorse or promote products 
     20      derived from this software without specific prior written permission. 
     21 
     22THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 
     23AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 
     24IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 
     25ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE 
     26LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 
     27CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF 
     28SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 
     29INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 
     30CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 
     31ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 
     32POSSIBILITY OF SUCH DAMAGE. 
     33*/ 
    534 
    635package loci.curvefitter; 
     
    1342 
    1443/** 
     44 * TODO 
    1545 * 
    16  * @author aivar 
     46 * <dl><dt><b>Source code:</b></dt> 
     47 * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayNRCurveFitter.java">Trac</a>, 
     48 * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayNRCurveFitter.java">SVN</a></dd></dl> 
     49 * 
     50 * @author Aivar Grislis grislis at wisc.edu 
    1751 */ 
    1852public class GrayNRCurveFitter extends AbstractCurveFitter { 
  • branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitData.java

    r6898 r6925  
    1 package loci.curvefitter; 
     1// 
     2// ICurveFitData.java 
     3// 
    24 
    35/* 
    4  * To change this template, choose Tools | Templates 
    5  * and open the template in the editor. 
    6  */ 
     6Curve Fitter library for fitting exponential decay curves. 
     7 
     8Copyright (c) 2010, UW-Madison LOCI 
     9All rights reserved. 
     10 
     11Redistribution and use in source and binary forms, with or without 
     12modification, are permitted provided that the following conditions are met: 
     13    * Redistributions of source code must retain the above copyright 
     14      notice, this list of conditions and the following disclaimer. 
     15    * Redistributions in binary form must reproduce the above copyright 
     16      notice, this list of conditions and the following disclaimer in the 
     17      documentation and/or other materials provided with the distribution. 
     18    * Neither the name of the UW-Madison LOCI nor the 
     19      names of its contributors may be used to endorse or promote products 
     20      derived from this software without specific prior written permission. 
     21 
     22THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 
     23AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 
     24IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 
     25ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE 
     26LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 
     27CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF 
     28SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 
     29INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 
     30CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 
     31ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 
     32POSSIBILITY OF SUCH DAMAGE. 
     33*/ 
     34 
     35package loci.curvefitter; 
    736 
    837/** 
    938 * Interface to the curve fitting data. 
    1039 * 
    11  * @author Aivar Grislis 
     40 * <dl><dt><b>Source code:</b></dt> 
     41 * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitData.java">Trac</a>, 
     42 * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitData.java">SVN</a></dd></dl> 
     43 * 
     44 * @author Aivar Grislis grislis at wisc.edu 
    1245 */ 
    1346//TODO fix params 
  • branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitter.java

    r6898 r6925  
     1// 
     2// ICurveFitter.java 
     3// 
     4 
     5/* 
     6Curve Fitter library for fitting exponential decay curves. 
     7 
     8Copyright (c) 2010, UW-Madison LOCI 
     9All rights reserved. 
     10 
     11Redistribution and use in source and binary forms, with or without 
     12modification, are permitted provided that the following conditions are met: 
     13    * Redistributions of source code must retain the above copyright 
     14      notice, this list of conditions and the following disclaimer. 
     15    * Redistributions in binary form must reproduce the above copyright 
     16      notice, this list of conditions and the following disclaimer in the 
     17      documentation and/or other materials provided with the distribution. 
     18    * Neither the name of the UW-Madison LOCI nor the 
     19      names of its contributors may be used to endorse or promote products 
     20      derived from this software without specific prior written permission. 
     21 
     22THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 
     23AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 
     24IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 
     25ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE 
     26LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 
     27CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF 
     28SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 
     29INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 
     30CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 
     31ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 
     32POSSIBILITY OF SUCH DAMAGE. 
     33*/ 
     34 
    135package loci.curvefitter; 
    236 
    3 /* 
    4  * To change this template, choose Tools | Templates 
    5  * and open the template in the editor. 
    6  */ 
    7  
    837/** 
    9  * 
    1038 * Interface for a curve fitter. 
    1139 * 
    12  * @author Aivar Grislis 
     40 * <dl><dt><b>Source code:</b></dt> 
     41 * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitter.java">Trac</a>, 
     42 * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/ICurveFitter.java">SVN</a></dd></dl> 
     43 * 
     44 * @author Aivar Grislis grislis at wisc.edu 
    1345 */ 
    1446//TODO max iterations; c/b used in lieu of 'iterate()'?? 
  • branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/JaolhoCurveFitter.java

    r6898 r6925  
     1// 
     2// JaolhoCurveFitter.java 
     3// 
     4 
    15/* 
    2  * To change this template, choose Tools | Templates 
    3  * and open the template in the editor. 
    4  */ 
     6Curve Fitter library for fitting exponential decay curves. 
     7 
     8Copyright (c) 2010, UW-Madison LOCI 
     9All rights reserved. 
     10 
     11Redistribution and use in source and binary forms, with or without 
     12modification, are permitted provided that the following conditions are met: 
     13    * Redistributions of source code must retain the above copyright 
     14      notice, this list of conditions and the following disclaimer. 
     15    * Redistributions in binary form must reproduce the above copyright 
     16      notice, this list of conditions and the following disclaimer in the 
     17      documentation and/or other materials provided with the distribution. 
     18    * Neither the name of the UW-Madison LOCI nor the 
     19      names of its contributors may be used to endorse or promote products 
     20      derived from this software without specific prior written permission. 
     21 
     22THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 
     23AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 
     24IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 
     25ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE 
     26LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 
     27CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF 
     28SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 
     29INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 
     30CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 
     31ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 
     32POSSIBILITY OF SUCH DAMAGE. 
     33*/ 
    534 
    635package loci.curvefitter; 
     
    1039 
    1140/** 
     41 * TODO 
    1242 * 
    13  * @author Aivar Grislis 
     43 * <dl><dt><b>Source code:</b></dt> 
     44 * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/JaolhoCurveFitter.java">Trac</a>, 
     45 * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/JaolhoCurveFitter.java">SVN</a></dd></dl> 
     46 * 
     47 * @author Aivar Grislis grislis at wisc.edu 
    1448 */ 
    1549public class JaolhoCurveFitter extends AbstractCurveFitter { 
  • branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/MarkwardtCurveFitter.java

    r6898 r6925  
     1// 
     2// MarkwardtCurveFitter.java 
     3// 
     4 
    15/* 
    2  * To change this template, choose Tools | Templates 
    3  * and open the template in the editor. 
    4  */ 
     6Curve Fitter library for fitting exponential decay curves. 
     7 
     8Copyright (c) 2010, UW-Madison LOCI 
     9All rights reserved. 
     10 
     11Redistribution and use in source and binary forms, with or without 
     12modification, are permitted provided that the following conditions are met: 
     13    * Redistributions of source code must retain the above copyright 
     14      notice, this list of conditions and the following disclaimer. 
     15    * Redistributions in binary form must reproduce the above copyright 
     16      notice, this list of conditions and the following disclaimer in the 
     17      documentation and/or other materials provided with the distribution. 
     18    * Neither the name of the UW-Madison LOCI nor the 
     19      names of its contributors may be used to endorse or promote products 
     20      derived from this software without specific prior written permission. 
     21 
     22THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 
     23AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 
     24IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 
     25ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE 
     26LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 
     27CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF 
     28SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 
     29INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 
     30CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 
     31ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 
     32POSSIBILITY OF SUCH DAMAGE. 
     33*/ 
    534 
    635package loci.curvefitter; 
     
    1241 
    1342/** 
     43 * TODO 
    1444 * 
    15  * @author aivar 
     45 * <dl><dt><b>Source code:</b></dt> 
     46 * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/MarkwardtCurveFitter.java">Trac</a>, 
     47 * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/MarkwardtCurveFitter.java">SVN</a></dd></dl> 
     48 * 
     49 * @author Aivar Grislis grislis at wisc.edu 
    1650 */ 
    1751public class MarkwardtCurveFitter extends AbstractCurveFitter { 
  • branches/maven/projects/curve-fitter/src/main/java/loci/curvefitter/SLIMCurveFitter.java

    r6898 r6925  
     1// 
     2// SLIMCurveFitter.java 
     3// 
     4 
    15/* 
    2  * To change this template, choose Tools | Templates 
    3  * and open the template in the editor. 
    4  */ 
     6Curve Fitter library for fitting exponential decay curves. 
     7 
     8Copyright (c) 2010, UW-Madison LOCI 
     9All rights reserved. 
     10 
     11Redistribution and use in source and binary forms, with or without 
     12modification, are permitted provided that the following conditions are met: 
     13    * Redistributions of source code must retain the above copyright 
     14      notice, this list of conditions and the following disclaimer. 
     15    * Redistributions in binary form must reproduce the above copyright 
     16      notice, this list of conditions and the following disclaimer in the 
     17      documentation and/or other materials provided with the distribution. 
     18    * Neither the name of the UW-Madison LOCI nor the 
     19      names of its contributors may be used to endorse or promote products 
     20      derived from this software without specific prior written permission. 
     21 
     22THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 
     23AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 
     24IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 
     25ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE 
     26LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 
     27CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF 
     28SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 
     29INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 
     30CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 
     31ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 
     32POSSIBILITY OF SUCH DAMAGE. 
     33*/ 
    534 
    635package loci.curvefitter; 
    736 
    837/** 
     38 * TODO 
    939 * 
    10  * @author aivar 
     40 * <dl><dt><b>Source code:</b></dt> 
     41 * <dd><a href="http://dev.loci.wisc.edu/trac/java/browser/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/SLIMCurveFitter.java">Trac</a>, 
     42 * <a href="http://dev.loci.wisc.edu/svn/java/trunk/projects/curve-fitter/src/main/java/loci/curvefitter/SLIMCurveFitter.java">SVN</a></dd></dl> 
     43 * 
     44 * @author Aivar Grislis grislis at wisc.edu 
    1145 */ 
    1246public class SLIMCurveFitter { 
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