Ignore:
Timestamp:
10/21/10 16:17:50 (9 years ago)
Author:
melissa
Message:

Updated metadata support documentation.

File:
1 edited

Legend:

Unmodified
Added
Removed
  • branches/4.2/components/autogen/src/meta-support.txt

    r7005 r7106  
    1313# This program is distributed in the hope that it will be useful, 
    1414# but WITHOUT ANY WARRANTY; without even the implied warranty of 
    15 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the 
     15# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 
    1616# GNU General Public License for more details. 
    1717# 
    1818# You should have received a copy of the GNU General Public License 
    1919# along with this program; if not, write to the Free Software 
    20 # Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307 USA 
     20# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA 
    2121 
    2222# This file documents the metadata support for each file format that 
     
    205205Channel.ID = Yes 
    206206Channel.SamplesPerPixel = Yes 
     207Experiment.erDisplayName = Yes 
    207208Experiment.erEmail = Yes 
    208209Experiment.erFirstName = Yes 
     210Experiment.erID = Yes 
    209211Experiment.erLastName = Yes 
    210212Image.AcquiredDate = Yes 
     
    265267Plate.ColumnNamingConvention = Yes 
    266268Plate.Description = Yes 
     269Plate.ID = Yes 
    267270Plate.Name = Yes 
    268271Plate.RowNamingConvention = Yes 
    269272Rectangle.Height = Yes 
     273Rectangle.ID = Yes 
    270274Rectangle.Width = Yes 
    271275Rectangle.X = Yes 
     
    273277ROI.ID = Yes 
    274278Well.Column = Yes 
     279Well.ID = Yes 
    275280Well.Row = Yes 
     281WellSample.ID = Yes 
    276282WellSample.ImageRef = Yes 
    277283WellSample.Index = Yes 
     
    327333DetectorSettings.Offset = Yes 
    328334Detector.Type = Yes 
     335Experiment.ID = Yes 
    329336Experiment.Type = Yes 
    330337Image.AcquiredDate = Yes 
     
    434441Image.Name = Yes 
    435442Instrument.ID = Yes 
     443Microscope.SerialNumber = Yes 
    436444Pixels.BinDataBigEndian = Yes 
    437445Pixels.DimensionOrder = Yes 
     
    457465WellSample.PositionX = Yes 
    458466WellSample.PositionY = Yes 
    459  
    460 [CRIReader] 
    461 Channel.ID = Yes 
    462 Channel.SamplesPerPixel = Yes 
    463 Image.AcquiredDate = Yes 
    464 Image.ID = Yes 
    465 Image.Name = Yes 
    466 Pixels.BinDataBigEndian = Yes 
    467 Pixels.DimensionOrder = Yes 
    468 Pixels.ID = Yes 
    469 Pixels.SizeC = Yes 
    470 Pixels.SizeT = Yes 
    471 Pixels.SizeX = Yes 
    472 Pixels.SizeY = Yes 
    473 Pixels.SizeZ = Yes 
    474 Pixels.Type = Yes 
    475 Plane.TheC = Yes 
    476 Plane.TheT = Yes 
    477 Plane.TheZ = Yes 
    478467 
    479468[DeltavisionReader] 
     
    553542Channel.SamplesPerPixel = Yes 
    554543Image.AcquiredDate = Yes 
    555 Image.ID = Yes 
    556 Image.Name = Yes 
    557 Pixels.BinDataBigEndian = Yes 
    558 Pixels.DimensionOrder = Yes 
    559 Pixels.ID = Yes 
     544Image.Description = Yes 
     545Image.ID = Yes 
     546Image.Name = Yes 
     547Pixels.BinDataBigEndian = Yes 
     548Pixels.DimensionOrder = Yes 
     549Pixels.ID = Yes 
     550Pixels.PhysicalSizeX = Yes 
     551Pixels.PhysicalSizeY = Yes 
     552Pixels.PhysicalSizeZ = Yes 
    560553Pixels.SizeC = Yes 
    561554Pixels.SizeT = Yes 
     
    624617Plane.TheT = Yes 
    625618Plane.TheZ = Yes 
     619 
     620[FEITiffReader] 
     621Channel.ID = Yes 
     622Channel.SamplesPerPixel = Yes 
     623Detector.ID = Yes 
     624Detector.Model = Yes 
     625Detector.Type = Yes 
     626Experiment.erDisplayName = Yes 
     627Experiment.erID = Yes 
     628Image.AcquiredDate = Yes 
     629Image.Description = Yes 
     630Image.ID = Yes 
     631Image.InstrumentRef = Yes 
     632Image.Name = Yes 
     633Instrument.ID = Yes 
     634Microscope.Model = Yes 
     635Pixels.BinDataBigEndian = Yes 
     636Pixels.DimensionOrder = Yes 
     637Pixels.ID = Yes 
     638Pixels.PhysicalSizeX = Yes 
     639Pixels.PhysicalSizeY = Yes 
     640Pixels.SizeC = Yes 
     641Pixels.SizeT = Yes 
     642Pixels.SizeX = Yes 
     643Pixels.SizeY = Yes 
     644Pixels.SizeZ = Yes 
     645Pixels.TimeIncrement = Yes 
     646Pixels.Type = Yes 
     647Plane.TheC = Yes 
     648Plane.TheT = Yes 
     649Plane.TheZ = Yes 
     650StageLabel.Name = Yes 
     651StageLabel.X = Yes 
     652StageLabel.Y = Yes 
     653StageLabel.Z = Yes 
    626654 
    627655[FitsReader] 
     
    696724Plate.ColumnNamingConvention = Yes 
    697725Plate.ExternalIdentifier = Yes 
     726Plate.ID = Yes 
    698727Plate.Name = Yes 
    699728Plate.RowNamingConvention = Yes 
    700729Well.Column = Yes 
     730Well.ID = Yes 
    701731Well.Row = Yes 
     732WellSample.ID = Yes 
    702733WellSample.ImageRef = Yes 
    703734WellSample.Index = Yes 
     
    743774Pixels.Type = Yes 
    744775Plane.DeltaT = Yes 
     776Plane.PositionX = Yes 
     777Plane.PositionY = Yes 
     778Plane.PositionZ = Yes 
    745779Plane.TheC = Yes 
    746780Plane.TheT = Yes 
     
    764798Dichroic.Model = Yes 
    765799Ellipse.FontSize = Yes 
     800Ellipse.ID = Yes 
    766801Ellipse.RadiusX = Yes 
    767802Ellipse.RadiusY = Yes 
     
    788823LightPath.EmissionFilterRef = Yes 
    789824Line.FontSize = Yes 
     825Line.ID = Yes 
    790826Line.StrokeWidth = Yes 
    791827Line.TheT = Yes 
     
    820856Plane.TheZ = Yes 
    821857Point.FontSize = Yes 
     858Point.ID = Yes 
    822859Point.StrokeWidth = Yes 
    823860Point.TheT = Yes 
     
    827864Polyline.Closed = Yes 
    828865Polyline.FontSize = Yes 
     866Polyline.ID = Yes 
    829867Polyline.Points = Yes 
    830868Polyline.StrokeWidth = Yes 
     
    834872Rectangle.FontSize = Yes 
    835873Rectangle.Height = Yes 
     874Rectangle.ID = Yes 
    836875Rectangle.StrokeWidth = Yes 
    837876Rectangle.TheT = Yes 
     
    851890DetectorSettings.Binning = Yes 
    852891DetectorSettings.ID = Yes 
     892Experiment.erDisplayName = Yes 
    853893Experiment.erFirstName = Yes 
    854894Experiment.erID = Yes 
     
    9741014DetectorSettings.ID = Yes 
    9751015Detector.Type = Yes 
     1016Experiment.erDisplayName = Yes 
     1017Experiment.erID = Yes 
    9761018Experiment.erLastName = Yes 
    9771019Image.AcquiredDate = Yes 
     
    9821024Image.ObjectiveSettingsID = Yes 
    9831025Instrument.ID = Yes 
     1026Laser.ID = Yes 
    9841027Laser.LaserMedium = Yes 
    9851028Laser.Type = Yes 
     
    10151058Channel.ID = Yes 
    10161059Channel.SamplesPerPixel = Yes 
     1060Experiment.erDisplayName = Yes 
    10171061Experiment.erFirstName = Yes 
    10181062Experiment.erID = Yes 
     
    12071251Plane.TheZ = Yes 
    12081252Plate.ColumnNamingConvention = Yes 
     1253Plate.ID = Yes 
    12091254Plate.Name = Yes 
    12101255Plate.RowNamingConvention = Yes 
     
    12121257Plate.WellOriginY = Yes 
    12131258Well.Column = Yes 
     1259Well.ID = Yes 
    12141260Well.Row = Yes 
     1261WellSample.ID = Yes 
    12151262WellSample.ImageRef = Yes 
    12161263WellSample.Index = Yes 
     
    12431290Plane.TheZ = Yes 
    12441291Rectangle.Height = Yes 
     1292Rectangle.ID = Yes 
    12451293Rectangle.Width = Yes 
    12461294Rectangle.X = Yes 
     
    15231571Image.AcquiredDate = Yes 
    15241572Image.ID = Yes 
    1525 Image.Name = Yes 
     1573Image.InstrumentRef = Yes 
     1574Image.Name = Yes 
     1575Instrument.ID = Yes 
    15261576Objective.Correction = Yes 
     1577Objective.ID = Yes 
    15271578Objective.Immersion = Yes 
    15281579Objective.WorkingDistance = Yes 
     
    15641615Plane.TheZ = Yes 
    15651616Polyline.Closed = Yes 
     1617Polyline.ID = Yes 
    15661618Polyline.Points = Yes 
    15671619ROI.ID = Yes 
     
    16781730Channel.Name = Yes 
    16791731Channel.SamplesPerPixel = Yes 
     1732Ellipse.ID = Yes 
    16801733Ellipse.Label = Yes 
    16811734Ellipse.RadiusX = Yes 
     
    16851738Ellipse.X = Yes 
    16861739Ellipse.Y = Yes 
     1740Experiment.Description = Yes 
    16871741Experiment.ID = Yes 
    16881742Experiment.Type = Yes 
     
    16971751Mask.Fill = Yes 
    16981752Mask.Height = Yes 
     1753Mask.ID = Yes 
    16991754Mask.Stroke = Yes 
    17001755Mask.Width = Yes 
    17011756Mask.X = Yes 
    17021757Mask.Y = Yes 
     1758Objective.ID = Yes 
    17031759Objective.Model = Yes 
    17041760Objective.NominalMagnification = Yes 
     
    17201776Plate.ColumnNamingConvention = Yes 
    17211777Plate.ExternalIdentifier = Yes 
     1778Plate.ID = Yes 
    17221779Plate.Name = Yes 
    17231780Plate.RowNamingConvention = Yes 
    17241781ROI.ID = Yes 
    17251782Well.Column = Yes 
     1783Well.ID = Yes 
    17261784Well.Row = Yes 
     1785WellSample.ID = Yes 
    17271786WellSample.ImageRef = Yes 
    17281787WellSample.Index = Yes 
     
    17351794Detector.Manufacturer = Yes 
    17361795Detector.Model = Yes 
     1796Detector.SerialNumber = Yes 
    17371797DetectorSettings.Binning = Yes 
    17381798DetectorSettings.Gain = Yes 
     
    17751835Pixels.DimensionOrder = Yes 
    17761836Pixels.ID = Yes 
     1837Pixels.PhysicalSizeX = Yes 
     1838Pixels.PhysicalSizeY = Yes 
     1839Pixels.PhysicalSizeZ = Yes 
    17771840Pixels.SizeC = Yes 
    17781841Pixels.SizeT = Yes 
     
    19542017Plane.TheT = Yes 
    19552018Plane.TheZ = Yes 
    1956 Polyline.Points = Yes 
    1957 Rectangle.Height = Yes 
    1958 Rectangle.Width = Yes 
    1959 Rectangle.X = Yes 
    1960 Rectangle.Y = Yes 
    1961 Text.FontSize = Yes 
    1962 Text.StrokeWidth = Yes 
    1963 Text.Value = Yes 
    19642019 
    19652020[NativeQTReader] 
     
    20212076Pixels.TimeIncrement = Yes 
    20222077Pixels.Type = Yes 
     2078Plane.TheC = Yes 
     2079Plane.TheT = Yes 
     2080Plane.TheZ = Yes 
     2081 
     2082[NikonElementsTiffReader] 
     2083Channel.AcquisitionMode = Yes 
     2084Channel.EmissionWavelength = Yes 
     2085Channel.ExcitationWavelength = Yes 
     2086Channel.ID = Yes 
     2087Channel.Name = Yes 
     2088Channel.PinholeSize = Yes 
     2089Channel.SamplesPerPixel = Yes 
     2090Detector.ID = Yes 
     2091Detector.Model = Yes 
     2092DetectorSettings.Binning = Yes 
     2093DetectorSettings.Gain = Yes 
     2094DetectorSettings.ID = Yes 
     2095DetectorSettings.ReadOutRate = Yes 
     2096DetectorSettings.Voltage = Yes 
     2097Detector.Type = Yes 
     2098Image.AcquiredDate = Yes 
     2099Image.ID = Yes 
     2100Image.InstrumentRef = Yes 
     2101Image.Name = Yes 
     2102Image.ObjectiveSettingsID = Yes 
     2103Image.ObjectiveSettingsRefractiveIndex = Yes 
     2104ImagingEnvironment.Temperature = Yes 
     2105Instrument.ID = Yes 
     2106Objective.CalibratedMagnification = Yes 
     2107Objective.Correction = Yes 
     2108Objective.ID = Yes 
     2109Objective.Immersion = Yes 
     2110Objective.LensNA = Yes 
     2111Objective.Model = Yes 
     2112Pixels.BinDataBigEndian = Yes 
     2113Pixels.DimensionOrder = Yes 
     2114Pixels.ID = Yes 
     2115Pixels.PhysicalSizeX = Yes 
     2116Pixels.PhysicalSizeY = Yes 
     2117Pixels.PhysicalSizeZ = Yes 
     2118Pixels.SizeC = Yes 
     2119Pixels.SizeT = Yes 
     2120Pixels.SizeX = Yes 
     2121Pixels.SizeY = Yes 
     2122Pixels.SizeZ = Yes 
     2123Pixels.Type = Yes 
     2124Plane.ExposureTime = Yes 
     2125Plane.PositionX = Yes 
     2126Plane.PositionY = Yes 
     2127Plane.PositionZ = Yes 
    20232128Plane.TheC = Yes 
    20242129Plane.TheT = Yes 
     
    20512156Channel.SamplesPerPixel = Yes 
    20522157Detector.Gain = Yes 
     2158Detector.ID = Yes 
    20532159Detector.Type = Yes 
    20542160Dichroic.ID = Yes 
     
    23822488[PrairieReader] 
    23832489Channel.ID = Yes 
     2490Channel.Name = Yes 
    23842491Channel.SamplesPerPixel = Yes 
    23852492Detector.ID = Yes 
     
    23882495DetectorSettings.Offset = Yes 
    23892496Detector.Type = Yes 
     2497Detector.Zoom = Yes 
    23902498Image.AcquiredDate = Yes 
    23912499Image.ID = Yes 
    23922500Image.InstrumentRef = Yes 
    23932501Image.Name = Yes 
     2502Image.ObjectiveSettingsID = Yes 
    23942503Instrument.ID = Yes 
     2504Laser.ID = Yes 
    23952505Laser.Power = Yes 
    2396 Pixels.BinDataBigEndian = Yes 
    2397 Pixels.DimensionOrder = Yes 
    2398 Pixels.ID = Yes 
    2399 Pixels.PhysicalSizeX = Yes 
    2400 Pixels.PhysicalSizeY = Yes 
    2401 Pixels.SizeC = Yes 
    2402 Pixels.SizeT = Yes 
    2403 Pixels.SizeX = Yes 
    2404 Pixels.SizeY = Yes 
    2405 Pixels.SizeZ = Yes 
    2406 Pixels.Type = Yes 
     2506Microscope.Model = Yes 
     2507Objective.Correction = Yes 
     2508Objective.ID = Yes 
     2509Objective.Immersion = Yes 
     2510Objective.LensNA = Yes 
     2511Objective.Manufacturer = Yes 
     2512Objective.NominalMagnification = Yes 
     2513Pixels.BinDataBigEndian = Yes 
     2514Pixels.DimensionOrder = Yes 
     2515Pixels.ID = Yes 
     2516Pixels.PhysicalSizeX = Yes 
     2517Pixels.PhysicalSizeY = Yes 
     2518Pixels.SizeC = Yes 
     2519Pixels.SizeT = Yes 
     2520Pixels.SizeX = Yes 
     2521Pixels.SizeY = Yes 
     2522Pixels.SizeZ = Yes 
     2523Pixels.TimeIncrement = Yes 
     2524Pixels.Type = Yes 
     2525Plane.PositionX = Yes 
     2526Plane.PositionY = Yes 
     2527Plane.PositionZ = Yes 
    24072528Plane.TheC = Yes 
    24082529Plane.TheT = Yes 
     
    25352656Plane.TheZ = Yes 
    25362657Plate.ColumnNamingConvention = Yes 
     2658Plate.ID = Yes 
    25372659Plate.Name = Yes 
    25382660Plate.RowNamingConvention = Yes 
    25392661Well.Column = Yes 
     2662Well.ID = Yes 
    25402663Well.Row = Yes 
     2664WellSample.ID = Yes 
    25412665WellSample.ImageRef = Yes 
    25422666WellSample.Index = Yes 
     
    25982722Pixels.SizeZ = Yes 
    25992723Pixels.Type = Yes 
     2724Plane.TheC = Yes 
     2725Plane.TheT = Yes 
     2726Plane.TheZ = Yes 
     2727 
     2728[SimplePCITiffReader] 
     2729Channel.ID = Yes 
     2730Channel.SamplesPerPixel = Yes 
     2731Detector.ID = Yes 
     2732Detector.Model = Yes 
     2733DetectorSettings.Binning = Yes 
     2734DetectorSettings.ID = Yes 
     2735Detector.Type = Yes 
     2736Image.AcquiredDate = Yes 
     2737Image.Description = Yes 
     2738Image.ID = Yes 
     2739Image.InstrumentRef = Yes 
     2740Image.Name = Yes 
     2741Instrument.ID = Yes 
     2742Objective.ID = Yes 
     2743Objective.Immersion = Yes 
     2744Objective.NominalMagnification = Yes 
     2745Pixels.BinDataBigEndian = Yes 
     2746Pixels.DimensionOrder = Yes 
     2747Pixels.ID = Yes 
     2748Pixels.PhysicalSizeX = Yes 
     2749Pixels.PhysicalSizeY = Yes 
     2750Pixels.SizeC = Yes 
     2751Pixels.SizeT = Yes 
     2752Pixels.SizeX = Yes 
     2753Pixels.SizeY = Yes 
     2754Pixels.SizeZ = Yes 
     2755Pixels.Type = Yes 
     2756Plane.ExposureTime = Yes 
    26002757Plane.TheC = Yes 
    26012758Plane.TheT = Yes 
     
    27962953Channel.ID = Yes 
    27972954Channel.SamplesPerPixel = Yes 
     2955Experiment.ID = Yes 
    27982956Experiment.Type = Yes 
    27992957Image.AcquiredDate = Yes 
     
    28733031Pixels.SizeZ = Yes 
    28743032Pixels.Type = Yes 
     3033Plane.TheC = Yes 
     3034Plane.TheT = Yes 
     3035Plane.TheZ = Yes 
     3036 
     3037[VarianFDFReader] 
     3038Channel.ID = Yes 
     3039Channel.SamplesPerPixel = Yes 
     3040Image.AcquiredDate = Yes 
     3041Image.ID = Yes 
     3042Image.Name = Yes 
     3043Pixels.BinDataBigEndian = Yes 
     3044Pixels.DimensionOrder = Yes 
     3045Pixels.ID = Yes 
     3046Pixels.PhysicalSizeX = Yes 
     3047Pixels.PhysicalSizeY = Yes 
     3048Pixels.PhysicalSizeZ = Yes 
     3049Pixels.SizeC = Yes 
     3050Pixels.SizeT = Yes 
     3051Pixels.SizeX = Yes 
     3052Pixels.SizeY = Yes 
     3053Pixels.SizeZ = Yes 
     3054Pixels.Type = Yes 
     3055Plane.PositionX = Yes 
     3056Plane.PositionY = Yes 
     3057Plane.PositionZ = Yes 
    28753058Plane.TheC = Yes 
    28763059Plane.TheT = Yes 
     
    29523135Dichroic.Model = Yes 
    29533136Ellipse.FontSize = Yes 
     3137Ellipse.ID = Yes 
    29543138Ellipse.RadiusX = Yes 
    29553139Ellipse.RadiusY = Yes 
     
    29753159LightPath.EmissionFilterRef = Yes 
    29763160Line.FontSize = Yes 
     3161Line.ID = Yes 
    29773162Line.StrokeWidth = Yes 
    29783163Line.X1 = Yes 
     
    30033188Plane.PositionX = Yes 
    30043189Plane.PositionY = Yes 
     3190Plane.PositionZ = Yes 
    30053191Plane.TheC = Yes 
    30063192Plane.TheT = Yes 
     
    30083194Polyline.Closed = Yes 
    30093195Polyline.FontSize = Yes 
     3196Polyline.ID = Yes 
    30103197Polyline.Points = Yes 
    30113198Polyline.StrokeWidth = Yes 
    30123199Rectangle.FontSize = Yes 
    30133200Rectangle.Height = Yes 
     3201Rectangle.ID = Yes 
    30143202Rectangle.StrokeWidth = Yes 
    30153203Rectangle.Width = Yes 
    30163204Rectangle.X = Yes 
    30173205Rectangle.Y = Yes 
     3206ROI.ID = Yes 
    30183207Text.FontSize = Yes 
     3208Text.ID = Yes 
    30193209Text.StrokeWidth = Yes 
    30203210Text.Value = Yes 
     
    30333223DetectorSettings.Offset = Yes 
    30343224Detector.Type = Yes 
     3225Ellipse.ID = Yes 
    30353226Ellipse.RadiusX = Yes 
    30363227Ellipse.RadiusY = Yes 
     
    30473238Image.ObjectiveSettingsID = Yes 
    30483239Instrument.ID = Yes 
     3240Line.ID = Yes 
    30493241Line.X1 = Yes 
    30503242Line.X2 = Yes 
     
    30773269Plane.TheZ = Yes 
    30783270Polyline.Closed = Yes 
     3271Polyline.ID = Yes 
    30793272Polyline.Points = Yes 
    30803273Rectangle.Height = Yes 
     3274Rectangle.ID = Yes 
    30813275Rectangle.Width = Yes 
    30823276Rectangle.X = Yes 
    30833277Rectangle.Y = Yes 
     3278ROI.ID = Yes 
    30843279 
    30853280[ZipReader] 
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