Changeset 7821 for trunk/projects/slim-plugin/src/main/java/loci/slim

Timestamp:

12/02/11 20:58:15 (8 years ago)

Author:

aivar

Message:

Experimented with MyFloatProcessor and DataColorizer2 to get IJ LUTs working. FloatProcessor doesn't like to display my updates, but I found a workaround.

Location:

trunk/projects/slim-plugin/src/main/java/loci/slim

Files:

• MyStackWindow.java (modified) (1 diff)
• SLIMProcessor.java (modified) (4 diffs)
• colorizer/DataColorizer2.java (added)

trunk/projects/slim-plugin/src/main/java/loci/slim/MyStackWindow.java

@@ -57 +57 @@
     public MyStackWindow(ImagePlus imp) {
         super(imp);
+        System.out.println("MyStackWindow " + imp.getTitle());        
         m_height = imp.getHeight();
         if (null != sliceSelector) {

trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java

@@ -64 +64 @@
 import loci.slim.binning.SLIMBinning;
 import loci.slim.colorizer.DataColorizer;
+ import loci.slim.colorizer.DataColorizer2;
+
 import loci.slim.ui.ExcitationPanel;
 import loci.slim.ui.IStartStopListener;
@@ -1005 +1007 @@
         if (m_visibleFit) {
             // show colorized image
-            DataColorizer dataColorizer = new DataColorizer(m_width, m_height, m_algorithm + " Fitted Lifetimes");
+            DataColorizer2 dataColorizer = new DataColorizer2(m_width, m_height, m_algorithm + " Fitted Lifetimes");
 
             ChunkyPixelEffectIterator pixelIterator = new ChunkyPixelEffectIterator(new ChunkyPixelTableImpl(), m_width, m_height);
@@ -1405 +1407 @@
      * @param pixels parallel list of rectangles with which to draw the fitted pixel
      */
-    void colorizePixels(DataColorizer dataColorizer, int channel, ICurveFitData data[], ChunkyPixel pixels[]) {
+    void colorizePixels(DataColorizer2 dataColorizer, int channel, ICurveFitData data[], ChunkyPixel pixels[]) {
 
         // draw as you go; 'chunky' pixels get smaller as the overall fit progresses
@@ -1453 +1455 @@
     }
     
-    void colorizePixelsII(DataColorizer dataColorizer, int channel, double[] lifetime, ChunkyPixel pixels[]) {
+    void colorizePixelsII(DataColorizer2 dataColorizer, int channel, double[] lifetime, ChunkyPixel pixels[]) {
 
         // draw as you go; 'chunky' pixels get smaller as the overall fit progresses