|
|
@3283
|
12 years |
melissa |
Make sure elementLength/compression indicators are reset.
|
|
|
@3282
|
12 years |
melissa |
Fixed case logic for setting pixel scale value.
|
|
|
@3281
|
12 years |
melissa |
Finished logic to correctly handle signed data.
|
|
|
@3280
|
12 years |
melissa |
Correctly handle signed data.
|
|
|
@3279
|
12 years |
melissa |
* Added new API method to loci.formats.codec.Codec to allow decompressing …
|
|
|
@3278
|
12 years |
melissa |
Fixed indexed to RGB conversion.
|
|
|
@3277
|
12 years |
curtis |
Fix problems with duplicate macro options.
|
|
|
@3276
|
12 years |
melissa |
* Fixed bug with "open each channel in new window" + "specify range".
* …
|
|
|
@3275
|
12 years |
melissa |
Fixed ZCT calculation for indexed color images.
|
|
|
@3274
|
12 years |
melissa |
Don't need to manually prepend directory name to file name.
|
|
|
@3273
|
12 years |
curtis |
Fix little bug in arg parsing.
|
|
|
@3272
|
12 years |
melissa |
More tiling/BigTIFF fixes.
|
|
|
@3271
|
12 years |
melissa |
Corrected image count calculation if we have indexed color planes.
|
|
|
@3270
|
12 years |
melissa |
Fixed tiling bug and added remaining BigTIFF types.
|
|
|
@3269
|
12 years |
melissa |
Initial implementation of BigTIFF.
|
|
|
@3268
|
12 years |
melissa |
Removed several hacks that added an extra blank channel if C == 2.
|
|
|
@3267
|
12 years |
melissa |
Added new ColorSpace for 2-channel images; updated ImageTools accordingly.
|
|
|
@3266
|
12 years |
melissa |
Fixed plane number -> IFD mapping for primary file.
|
|
|
@3265
|
12 years |
curtis |
Clean up and debug image construction methods.
|
|
|
@3264
|
12 years |
curtis |
Use BYTES_PER_ENTRY instead of hardcoded 12 where relevant.
|
|
|
@3263
|
12 years |
curtis |
Rename "used" to "usedFiles" so it is easier to search.
|
|
|
@3262
|
12 years |
curtis |
Remove unnecessary imports.
|
|
|
@3261
|
12 years |
melissa |
Only parse the primary file once.
|
|
|
@3260
|
12 years |
curtis |
TiffComment now has a trivial implementation thanks to …
|
|
|
@3259
|
12 years |
curtis |
* Add TiffTools.getComment convenience method.
* Some efficiency …
|
|
|
@3258
|
12 years |
melissa |
Removed option to force compatible pixel type.
|
|
|
@3257
|
12 years |
curtis |
Standardize getPixels methods to use a single sample model checker
method …
|
|
|
@3256
|
12 years |
curtis |
Comment out reference to broken makeType method.
|
|
|
@3255
|
12 years |
curtis |
Comment out reference to broken makeType method.
|
|
|
@3254
|
12 years |
curtis |
Fix getPixels implementations to never use makeType, and get rid of …
|
|
|
@3253
|
12 years |
melissa |
All byte array to float array conversions are now handled by …
|
|
|
@3252
|
12 years |
melissa |
Fixed bug in fake rows per strip calculation.
|
|
|
@3251
|
12 years |
melissa |
Added default saveBytes implementations. To use saveBytes, a …
|
|
|
@3250
|
12 years |
curtis |
Disable editing of file path text boxes for now.
|
|
|
@3249
|
12 years |
melissa |
Fixed pixel type mismatch.
|
|
|
@3248
|
12 years |
melissa |
Fixed series/currentSeries typo; update file map along with IFD map.
|
|
|
@3247
|
12 years |
melissa |
Added support for JPEG-compressed ZVI images.
|
|
|
@3246
|
12 years |
melissa |
Fixed one last bug.
|
|
|
@3245
|
12 years |
melissa |
Parse XML using SAX.
|
|
|
@3244
|
12 years |
melissa |
Added option to open each plane in a separate window; fixed CustomImage …
|
|
|
@3243
|
12 years |
curtis |
Echo status message events to the ImageJ status bar.
|
|
|
@3242
|
12 years |
curtis |
Add Javadoc for getReorderedIndex.
|
|
|
@3241
|
12 years |
curtis |
Another status message, indicating parsing of each constituent OME-TIFF …
|
|
|
@3240
|
12 years |
curtis |
Add status message for each TIFF file checked.
|
|
|
@3239
|
12 years |
melissa |
Fixed bug with >2GB files.
|
|
|
@3238
|
12 years |
melissa |
Improved logic for mapping plane numbers to IFDs - scrambled TiffData …
|
|
|
@3237
|
12 years |
melissa |
Fixed sizeC calculation for RGBA TIFFs.
|
|
|
@3236
|
12 years |
curtis |
Use openmicroscopy.org, not org.openmicroscopy, for IDs.
|
|
|
@3235
|
12 years |
curtis |
Fix typo in Pixels IDs.
|
|
|
@3234
|
12 years |
curtis |
Brief what's new for minor 2007 Oct 5 Bio-Formats release.
|
|
|
@3233
|
12 years |
curtis |
Fix bug with scramble feature.
|
|
|
@3232
|
12 years |
curtis |
Fix multi-Image and multi-Pixels TiffData tags; first cut at IFD …
|
|
|
@3231
|
12 years |
curtis |
Generator now distinguishes between multiple Images vs multiple Pixels.
|
|
|
@3230
|
12 years |
melissa |
Fixed width/height mismatch detection, TiffData scrambling in single-file …
|
|
|
@3229
|
12 years |
curtis |
OME-TIFF sample data generator now writes OME-TIFF with multiple series. …
|
|
|
@3228
|
12 years |
curtis |
Progress on OME-TIFF sample file generator. Currently generates plain …
|
|
|
@3227
|
12 years |
melissa |
Fixed min TiffData calculation.
|
|
|
@3226
|
12 years |
melissa |
Look for the smallest TiffData tag, instead of always using the first one.
|
|
|
@3225
|
12 years |
melissa |
Multi-series OME-TIFF files should now work.
|
|
|
@3224
|
12 years |
curtis |
Begin work on utility for generating OME-TIFF sample datasets.
|
|
|
@3223
|
12 years |
curtis |
Gray out time slider when no format reader is specified.
|
|
|
@3222
|
12 years |
curtis |
Allow null IFormatReader, and add corresponding setImages signature.
|
|
|
@3221
|
12 years |
melissa |
Only group files if the Image LSID is present, and print warnings if the …
|
|
|
@3220
|
12 years |
melissa |
Added support for MS Video 1 codec.
|
|
|
@3219
|
12 years |
melissa |
Fixed how files are grouped.
|
|
|
@3218
|
12 years |
curtis |
Allow processing from stdin.
|
|
|
@3217
|
12 years |
curtis |
Whitespace.
|
|
|
@3216
|
12 years |
melissa |
Set metadataComplete flag.
|
|
|
@3215
|
12 years |
melissa |
2007 Oct 01 release of LOCI Tools
|
|
|
@3214
|
12 years |
melissa |
2007 Oct 01 release of LOCI Tools
|
|
|
@3213
|
12 years |
melissa |
2007 Oct 01 release of LOCI Tools
|
|
|
@3212
|
12 years |
melissa |
2007 Oct 01 release of LOCI Tools
|
|
|
@3211
|
12 years |
melissa |
2007 Oct 01 release of LOCI Tools
|
|
|
@3210
|
12 years |
melissa |
2007 Oct 01 release of LOCI Tools
|
|
|
@3209
|
12 years |
melissa |
2007 Oct 01 release of LOCI Tools
|
|
|
@3208
|
12 years |
melissa |
2007 Oct 01 release of LOCI Tools
|
|
|
@3207
|
12 years |
curtis |
Clean up what's new list a bit for October 1 release.
|
|
|
@3206
|
12 years |
melissa |
Updated what's new for next release.
|
|
|
@3205
|
12 years |
melissa |
Don't create a StageLabel if all values are null.
|
|
|
@3204
|
12 years |
melissa |
Removed obsolete 'valid bits' logic; minor cleanup/bugfixes.
|
|
|
@3203
|
12 years |
melissa |
Don't autoscale images in the data browser.
|
|
|
@3202
|
12 years |
melissa |
Added support for Photoshop PSD files.
|
|
|
@3201
|
12 years |
curtis |
Miscellaneous tweaks.
|
|
|
@3200
|
12 years |
curtis |
Fix some problems with XML validation.
|
|
|
@3199
|
12 years |
curtis |
Add hack to work around negative SizeZ/C/T values.
|
|
|
@3198
|
12 years |
melissa |
Added support for uncompressed LIM files.
|
|
|
@3197
|
12 years |
melissa |
* Added isFalseColor() to IFormatReader API; updated ChannelFiller …
|
|
|
@3196
|
12 years |
melissa |
Added option to turn off autoscaling.
|
|
|
@3195
|
12 years |
melissa |
Fixed NPE in get*BitLookupTable().
|
|
|
@3194
|
12 years |
curtis |
Add printout of indexed color and LUT information to showinf.
|
|
|
@3193
|
12 years |
curtis |
Print series names in core metadata listing if metadata store is set.
|
|
|
@3192
|
12 years |
curtis |
Comment out unnecessary imports.
|
|
|
@3191
|
12 years |
melissa |
Slight speed improvement when reading intensity data.
|
|
|
@3190
|
12 years |
melissa |
Fixed ClassCastException.
|
|
|
@3189
|
12 years |
melissa |
Added support for JPEG and RLE-compressed DICOM images.
|
|
|
@3188
|
12 years |
melissa |
Added hack to compute emission/excitation wavelengths from channel name.
|
|
|
@3187
|
12 years |
curtis |
Comment out File menu for now.
|
|
|
@3186
|
12 years |
curtis |
Use AWT menu bar instead of Swing menu bar to avoid Java3D heavyweight …
|
|
|
@3185
|
12 years |
curtis |
Whitespace.
|
|
|
@3184
|
12 years |
curtis |
Eliminate jikes warnings.
|
|
|