source: branches @ 7024

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Diff Rev Age Author Log Message
(edit) @7024   10 years aivar TIdy up code.
(edit) @7023   10 years aivar TIdy up code.
(edit) @7020   10 years melissa Hide temporary files in a subdirectory of /tmp, so that the tests are …
(edit) @7019   10 years melissa Added support for RGB and indexed color images. Closes #567.
(edit) @7017   10 years aivar Debugging: print out info on pixels with 'bad' fit: calculated lifetime …
(edit) @7016   10 years aivar Added SLIMCURVE fit algorithms.
(edit) @7015   10 years aivar Added SLIMCURVE fit algorithms.
(edit) @7011   10 years rlentz
(edit) @7010   10 years melissa Fixed a bug that prevented extra LIF channels from being removed. Closes …
(edit) @7008   10 years melissa Added missing files.
(edit) @7007   10 years melissa Merged remainder of build, test, and SVN/Trac link changes to 4.2.
(edit) @7006   10 years melissa Merged remaining reader changes: r6708, r6727, r6778, r6779, r6782, r6787, …
(edit) @7005   10 years melissa Merged remaining MATLAB, command line tool, and C++ changes into 4.2: …
(edit) @7004   10 years melissa Merged TIFF export fixes into 4.2: r6878, r6976, and r6977.
(edit) @7003   10 years melissa Merged metadata population fixes into 4.2: r6700, r6711, r6719, r6728, …
(edit) @7002   10 years melissa Merged type checking fixes into 4.2: r6724, r6726, r6741, r6746, and …
(edit) @7001   10 years melissa Merged ome-io component changes into 4.2: r6759, r6760, r6761, r6769, …
(edit) @7000   10 years melissa Merged remaining ImageJ plugin changes to 4.2.
(edit) @6999   10 years melissa Merged common XML changes in to 4.2: r6717, r6888, and r6985.
(edit) @6998   10 years melissa Merged base reader changes into 4.2: r6688, r6756, r6757, r6764, r6853, …
(edit) @6997   10 years melissa Merged new readers into 4.2: r6758, r6783, r6790, r6797, r6801, r6845.
(edit) @6996   10 years melissa Merged changes to common component and logging into 4.2: r6696, r6722, …
(edit) @6995   10 years melissa Merged recent ScanR changes: r6720, r6810, r6838, r6959, and r6967.
(edit) @6994   10 years melissa Merged GUI tools changes: r6766 and r6774.
(edit) @6993   10 years melissa Merged minor API additions to 4.2: r6747 and r6798.
(edit) @6992   10 years melissa Merged recent Zeiss LSM changes to 4.2: r6697, r6713, and r6842.
(edit) @6991   10 years melissa Merged r6695 into 4.2.
(edit) @6990   10 years curtis Backport r6985 to maven branch.
(edit) @6987   10 years melissa Parse scanner serial numbers from the plate log file.
(edit) @6984   10 years curtis Generate Javadocs as part of site generation.
(edit) @6983   10 years melissa Fixed various dimension ordering bugs in new multi-file Improvision TIFF …
(edit) @6981   10 years melissa Only populate a channel's excitation wavelength if the wavelength is …
(edit) @6980   10 years curtis Fix slim-plugin compile errors in Eclipse.
(edit) @6979   10 years curtis Require Java 1.6 for ome-io.
(edit) @6975   10 years melissa One more set of ArrayIndexOutOfBounds fixes for certain LZW-compressed …
(edit) @6972   10 years melissa Only apply LUTs to sliced stacks if the original CompositeImage used the …
(edit) @6971   10 years melissa Updated upgrade check status message to be a bit more clear.
(edit) @6970   10 years melissa Support for multi-file Improvision/Volocity TIFF datasets.
(edit) @6968   10 years melissa Prevent ArrayIndexOutOfBoundsException when decompressing certain …
(edit) @6966   10 years aivar Added SLIMCURVE fit algorithms. Worked on JavaDoc.
(edit) @6964   10 years curtis Move Rick's OpenCL deconvolution project into projects subtree.
(edit) @6958   10 years melissa Fixed error in plane index calculation.
(edit) @6957   10 years curtis Merge native projects with main projects tree.
(edit) @6956   10 years curtis Add SLIM-curve project.
(edit) @6955   10 years curtis Remove obsolete ignore rules.
(edit) @6954   10 years curtis Ignore Eclipse metadata files.
(edit) @6951   10 years melissa Backported r6714, r6716, r6948, and r6949 to 4.2. See #557.
(edit) @6950   10 years curtis Backport r6948,r6949 to 4.2 branch.
(edit) @6947   10 years callan Merging r6715 from Trunk. (See #543)
(edit) @6944   10 years callan Merging r6943 from Trunk. (See #561)
(edit) @6942   10 years aivar Added m_free, describes which parameters are free vs. fixed. Commented out …
(edit) @6941   10 years aivar Added m_free, describes which parameters are free vs. fixed.
(edit) @6940   10 years aivar Removed m_free: This information belongs to the curvefitter instance, not …
(edit) @6939   10 years aivar Handles m_free, which parameters are free vs. fixed. Loads dynamic library …
(edit) @6938   10 years aivar Handles m_free, which parameters are free vs. fixed.
(edit) @6937   10 years curtis Remove obsolete test folder.
(edit) @6936   10 years curtis Fix up license for utils project.
(edit) @6935   10 years curtis Fix typo in ome-notes license link.
(edit) @6934   10 years curtis Fix up license for test-suite project.
(edit) @6933   10 years curtis Fix up license for flow-cytometry project.
(edit) @6932   10 years curtis Fix up license for slim-plugin project.
(edit) @6931   10 years curtis Fix up license for jvmlink project.
(edit) @6930   10 years curtis Fix up license for lwf-stubs project.
(edit) @6929   10 years curtis Fix up license for multi-lut project.
(edit) @6928   10 years curtis Fix up license for loci-checks project.
(edit) @6927   10 years curtis Fix up license for misc-plugins project.
(edit) @6926   10 years curtis Fix up license for jar2lib project.
(edit) @6925   10 years curtis Fix up license for curve-fitter project.
(edit) @6923   10 years callan Fixing infinite loop introduced by merging r6367 from Trunk. (See #560)
(edit) @6922   10 years callan Merging r6367 from Trunk. (See #560)
(edit) @6921   10 years callan A solution for file handles being left hanging around after close() on …
(edit) @6920   10 years callan Merged r6743 and r6872 from Trunk. (See #543)
(edit) @6919   10 years callan Merging r6917 from Trunk.
(edit) @6918   10 years callan Merged r6917 and r6916 from Trunk.
(edit) @6915   10 years curtis Remove obsolete components folder.
(edit) @6914   10 years curtis Initial version of autogen Maven project. Needs cleaning up.
(edit) @6913   10 years curtis Begin migration of autogen project to Maven.
(edit) @6912   10 years curtis Remove Bio-Formats Ice package for now.
(edit) @6911   10 years curtis Miscellaneous small tweaks.
(edit) @6910   10 years callan Merging commits (r6690, r6692, r6735, r6784, r6786) from Trunk with …
(edit) @6909   10 years curtis Remove non-Maven version of test-suite project.
(edit) @6908   10 years curtis Maven version of test-suite project.
(edit) @6907   10 years curtis Tweak Maven repositories list.
(edit) @6906   10 years curtis Maven version of Aivar's standalone ImageJ plugins.
(edit) @6905   10 years curtis Add fiji-lib dependency for slim-plugin; it compiles now.
(edit) @6904   10 years aivar Commented out version 1.0.13 BarRender method to work with version 12 in …
(edit) @6903   10 years curtis Move Bio-Formats command line tools to default Maven scripts path.
(edit) @6902   10 years curtis Add additional projects to umbrella.
(edit) @6901   10 years curtis Tweak some licenses.
(edit) @6900   10 years curtis POM for Jama.
(edit) @6899   10 years curtis New curve fitter package, migrated from …
(edit) @6898   10 years curtis New curve fitter package, migrated from …
(edit) @6897   10 years curtis Update SLIM Plotter to work with jaolho LMA v1.3.
(edit) @6895   10 years curtis Maven version of loci-checks.
(edit) @6894   10 years curtis Fix ome-editor author.
(edit) @6893   10 years curtis Maven version of ome-editor.
(edit) @6892   10 years curtis Maven version of ome-notes (but still doesn't compile).
(edit) @6887   10 years melissa Backported r6839, r6840, and r6841 to 4.2.
(edit) @6885   10 years curtis Maven version of legacy Multi-LUT application.
(edit) @6884   10 years curtis Maven version of jvmlink project.
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