source: trunk/components/loci-plugins @ 6326

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Diff Rev Age Author Log Message
(edit) @6326   10 years curtis Initial, naive implementation of color modes.
(edit) @6325   10 years curtis Remove unfinished VisBio option.
(edit) @6324   10 years curtis Add API for assigning custom colors programmatically.
(edit) @6322   10 years curtis Initial version of color mode selector. Not yet working.
(edit) @6321   10 years bdezonia Some generalization done. Got autoscale test to pass.
(edit) @6314   10 years bdezonia Minor reorganization to simplify tracing a BF bug
(edit) @6311   10 years curtis Unused import.
(edit) @6307   10 years bdezonia more work on autoscale so that its expected min is not always 0.
(edit) @6302   10 years bdezonia minor modification to autoscale testing. refactored memoryRecord test.
(edit) @6297   10 years bdezonia partial impl of autoscale
(edit) @6296   10 years curtis Remove "standard ImageJ" display option.
(edit) @6295   10 years curtis Fix autoscaling.
(edit) @6293   10 years curtis Remove non-working OMERO importer logic.
(edit) @6292   10 years curtis Put information panel on right instead of bottom.
(edit) @6291   10 years curtis Fix testDatasetConcatenate.
(edit) @6288   10 years bdezonia fixed split tests. partial implementation of color tests. minor edits.
(edit) @6287   10 years curtis Fix testSplitChannels.
(edit) @6286   10 years curtis Fix bugs in splitZ/C/T tests.
(edit) @6285   10 years bdezonia Added memoryRecord test. Also some code cleanup. Added tests in …
(edit) @6284   10 years curtis Progress on Z/C/T splitting. Works with Importer plugin, but test still …
(edit) @6283   10 years bdezonia minor changes. some more code in color tests.
(edit) @6282   10 years bdezonia Fixed swapdims test to handle all pixel formats.
(edit) @6281   10 years bdezonia Incorporated merge changes. Put in test for out of bounds in range test.
(edit) @6280   10 years curtis Remove obsolete(?) hack -- seems to work without it, at least.
(edit) @6279   10 years curtis Fix a bunch of warnings.
(edit) @6278   10 years curtis Progress on Bio-Formats Importer refactoring.
(edit) @6277   10 years curtis Fix range test indices.
(edit) @6276   10 years curtis Make ZCT index extraction methods smarter about FloatProcessor. Still …
(edit) @6275   10 years bdezonia added an additional test for swapDims
(edit) @6274   10 years bdezonia various impls and improvements. updated swapDimsTest to check order of …
(edit) @6273   10 years curtis Progress on Bio-Formats Importer refactoring: * Fix problem with …
(edit) @6271   10 years curtis Cleaner import preparation process (ImportProcess & ImportStep).
(edit) @6270   10 years bdezonia fixed bug in splits tests
(edit) @6269   10 years bdezonia Fixed expected values for split tests
(edit) @6268   10 years bdezonia Merged changes from repository. Improved coverage of test code for …
(edit) @6265   10 years curtis Progress on Bio-Formats Importer refactoring and tests.
(edit) @6261   10 years bdezonia more work on splitting tests
(edit) @6260   10 years bdezonia initial impl of the split routines
(edit) @6259   10 years bdezonia further work: group files, open indiv files
(edit) @6258   10 years curtis Fix bug with dimensional extents.
(edit) @6253   10 years bdezonia added reflection code for testing private vars of ImagePlus
(edit) @6251   10 years bdezonia Further test implementation
(edit) @6250   10 years bdezonia Further implementation
(edit) @6249   10 years curtis Update the way View5D is invoked.
(edit) @6248   10 years bdezonia partial implementation
(edit) @6247   10 years curtis Progress on Bio-Formats Importer refactoring.
(edit) @6246   10 years curtis Add API to ImporterOptions for setting series, range and crop values.
(edit) @6242   10 years curtis Specify a pixel type for the importer tests.
(edit) @6240   10 years curtis Initial version of some simple tests for Bio-Formats Importer.
(edit) @6239   10 years curtis Minor progress on Bio-Formats Importer refactoring.
(edit) @6238   10 years curtis Add toplevel utility method for obtaining ImagePlus from path string.
(edit) @6235   10 years curtis Add ome-xml.jar to Eclipse classpath, hopefully as a temporary workaround.
(edit) @6230   10 years melissa Updated to new MetadataStore/MetadataRetrieve APIs. This may temporarily …
(edit) @6229   10 years curtis Minor progress on Bio-Formats plugins refactoring. * Reorganize some …
(edit) @6223   10 years curtis Temporary fix for compile errors.
(edit) @6220   10 years curtis Open sliced images as hyperstacks by default.
(edit) @6219   10 years curtis Fix Slicer plugin.
(edit) @6165   10 years curtis Fix up Eclipse classpaths: * Use build-eclipse instead of build/classes …
(edit) @6155   10 years curtis Various cleanup and refactoring progress. * Progress on Bio-Formats …
(edit) @6141   10 years curtis Use generics where appropriate; fix miscellaneous warnings and issues.
(edit) @6132   10 years curtis More progress on Bio-Formats Importer refactoring. Not totally happy …
(edit) @6131   10 years curtis More progress on Bio-Formats Importer. Probably breaks some options.
(edit) @6130   10 years curtis Progress on Bio-Formats Importer refactoring.
(edit) @6128   10 years curtis Fix some Eclipse warnings, clean up imports, minor progress on Importer …
(edit) @6114   10 years curtis Begin rearranging some code.
(edit) @6083   10 years curtis Add log4j libraries to LibraryChecker.
(edit) @6045   10 years curtis Fix various dependency problems exposed by scan-deps.pl.
(edit) @6039   10 years curtis Add scroll bars as needed to main Bio-Formats Importer dialog.
(edit) @6034   10 years melissa * Fixed 16-bit lookup table handling in ImageJ. * Prevent IFD.printIFD …
(edit) @6029   10 years melissa * Prevent an NPE in …
(edit) @6026   10 years melissa Merging cleanup branch back into trunk.
(edit) @6025   10 years curtis Minor tweaks.
(edit) @6022   10 years curtis Progress on importer refactoring. Still much left to do.
(edit) @6016   10 years curtis Move a bunch of Ant junk into its own folder.
(edit) @6011   10 years curtis Progress on cleanup of original metadata table handling.
(edit) @6008   10 years curtis Fix macro arguments.
(edit) @6007   10 years curtis Clean up some unchecked operations.
(edit) @5999   10 years melissa Moved LUT application to separate method.
(edit) @5992   10 years melissa Set lookup tables correctly, if they are present.
(edit) @5989   10 years curtis More cleanup of URLs.
(edit) @5987   10 years curtis Update a bunch of URLs. Still more to be done in various packages though.
(edit) @5959   10 years curtis Quick fix to a problem with "Merge channels" when not using virtual …
(edit) @5911   10 years curtis Add documentation for isThisTypeFast macro function.
(edit) @5910   10 years curtis Add "isThisTypeFast" macro function for calling isThisType(id, false).
(edit) @5886   10 years melissa Fixed autoscaling to use actual minimum and maximum pixel values. Closes …
(edit) @5881   10 years curtis Clean up import statements.
(edit) @5880   10 years curtis Add TIFF JAI-based reader for reading TIFFs with Java Advanced Imaging. …
(edit) @5857   10 years curtis Progress on Bio-Formats Importer refactoring. Probably some new bugs.
(edit) @5828   10 years melissa Added method to retrieve the format name for a particular file.
(edit) @5820   10 years melissa When parsing an option, look for the option's label if the key is missing.
(edit) @5786   10 years melissa Ensure that calibration information is preserved, regardless of how the …
(edit) @5769   10 years melissa Added support for half float and half double pixels. Closes #456.
(edit) @5729   10 years melissa * Added option to disable file grouping in ImageJ plugin. Closes #440. * …
(edit) @5693   10 years melissa * Throw a more informative exception if an invalid file pattern is passed …
(edit) @5666   10 years curtis Fix OSGi version numbers to match latest 4.1.0 release.
(edit) @5660   10 years melissa Ensure that the series is correct before constructing a virtual stack.
(edit) @5634   10 years melissa Changed trunk version number to 4.2-DEV.
(edit) @5632   10 years melissa Updated version number in trunk. Closes #432.
(edit) @5624   10 years curtis Use Double instead of Float for all floating point OME metadata.
(edit) @5605   10 years curtis Clean up import statements.
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