#
# ChangeLog for trunk/projects/jar2lib
# 
# Generated by Trac 0.12.2
# 12/14/19 04:24:40
 
Tue, 20 Sep 2011 17:57:36 GMT hinerm [7777]
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/source/javaTools.cxx (modified)

	Fixed append in Windows directory search

	Previously was appending ".*" ...


Tue, 20 Sep 2011 14:56:33 GMT hinerm [7776]
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Fixed jace-runtime.jar copy path

	The previous path to copy ...


Mon, 19 Sep 2011 20:22:18 GMT hinerm [7775]
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Added Build path consideration to EXE files

	The templated code for exe ...


Fri, 16 Sep 2011 17:58:55 GMT hinerm [7774]
	* trunk/projects/jar2lib/pom.xml (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)

	Removed StringEscapeUtils reference

	It was found that erroneous string ...


Fri, 16 Sep 2011 17:14:28 GMT hinerm [7773]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/VelocityAutogen.java (modified)
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Removed File usage from automation of CMakeLists.txt

	The use of a File ...


Fri, 16 Sep 2011 14:09:16 GMT hinerm [7772]
	* trunk/projects/jar2lib/pom.xml (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)

	Added StringEscapeUtils to Jar2Lib

	Added a new dependency from the ...


Thu, 15 Sep 2011 20:20:13 GMT hinerm [7769]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)

	updated fixLibraryPath J2L method

	Attempting to use replaceAll method ...


Thu, 15 Sep 2011 20:01:33 GMT hinerm [7768]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)

	Updated J2L jar path conversion method

	The J2L method for conversion ...


Thu, 15 Sep 2011 19:56:14 GMT hinerm [7767]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)

	Added new method to J2L to fix jar paths

	A new method was added as part ...


Thu, 15 Sep 2011 19:40:43 GMT hinerm [7764]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)

	Added extra level of escape ('\') for jar file conversions

	A single ...


Thu, 15 Sep 2011 19:26:44 GMT hinerm [7763]
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Bug fix in CMakeLists: empty variable

	The CMakeLists.vm included ...


Thu, 15 Sep 2011 18:48:13 GMT hinerm [7757]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Moved jar name fixing back to Java side of processing

	With CMake doing ...


Thu, 15 Sep 2011 18:39:16 GMT hinerm [7756]
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Fix for CMakeLists.vm - slash correction

	The code to convert ...


Thu, 15 Sep 2011 15:28:56 GMT hinerm [7755]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Moved String conversion code to CMake

	Instead of the Jar2Lib trying to ...


Thu, 15 Sep 2011 14:11:28 GMT hinerm [7754]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)

	Adjusted correction of jar paths

	The previous fix to correct '\' to '/' ...


Thu, 15 Sep 2011 13:47:23 GMT hinerm [7753]
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/include/javaTools.h (modified)

	Removed Jtools reference to dirent.h

	JTools source was previously ...


Wed, 14 Sep 2011 20:48:45 GMT hinerm [7752]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)

	Jar2Lib now converts "\" to "/" in discovered jar paths

	On Windows, the ...


Wed, 14 Sep 2011 20:45:50 GMT hinerm [7751]
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/include/javaTools.h (modified)
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/source/javaTools.cxx (modified)

	Modified javaTools library for Windows functionality

	JTools was ...


Wed, 14 Sep 2011 20:43:24 GMT hinerm [7750]
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Added support for building on Windows platforms

	The CMakeLists.txt ...


Wed, 31 Aug 2011 15:34:02 GMT hinerm [7743]
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Improved control flow of platform specific installation

	Previously, ...


Tue, 16 Aug 2011 20:26:42 GMT hinerm [7734]
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/include/javaTools.h (modified)
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/source/javaTools.cxx (modified)

	More control allowed in JavaTools

	The following options were added to ...


Tue, 16 Aug 2011 20:22:09 GMT hinerm [7733]
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)
	* trunk/projects/jar2lib/src/main/resources/project-files/jace/CMakeLists.txt (modified)

	Updated CMakeLists for OSX + Linux

	Changes include:
	*Removed redundant ...


Wed, 03 Aug 2011 20:09:05 GMT hinerm [7732]
	* trunk/projects/jar2lib/src/main/resources/project-files/jace/Prerequisites.cmake (modified)

	Unix builds now default to .so Boost libraries
	For reasons unknown, ...


Wed, 03 Aug 2011 16:13:58 GMT hinerm [7731]
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/include/javaTools.h (modified)
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/source/javaTools.cxx (modified)

	Fixes for ticket #298 and #654

	Ticket #298 fixes:
	  * search for a ...


Sat, 18 Jun 2011 09:11:18 GMT curtis [7730]
	* trunk/projects/cppwrap-maven-plugin/pom.xml (modified)
	* trunk/projects/curve-fitter/pom.xml (modified)
	* trunk/projects/deep-zoom-plugin/pom.xml (modified)
	* trunk/projects/flow-cytometry/pom.xml (modified)
	* trunk/projects/jar2lib/pom.xml (modified)
	* trunk/projects/loci-checks/pom.xml (modified)
	* trunk/projects/misc-plugins/pom.xml (modified)
	* trunk/projects/slim-curve/pom.xml (modified)
	* trunk/projects/slim-plugin/pom.xml (modified)
	* trunk/projects/utils/pom.xml (modified)
	* trunk/projects/wiscscan-java/pom.xml (modified)

	Fix SVN path to license files.


Wed, 15 Jun 2011 14:39:48 GMT curtis [7729]
	* trunk/projects/jar2lib/src/main/resources/project-files/jace/Prerequisites.cmake (modified)

	Add Boost versions up to 1.60.


Wed, 15 Jun 2011 08:47:46 GMT curtis [7728]
	* trunk/projects/jar2lib/bf-cpp (deleted)
	* trunk/projects/jar2lib/deploy_jar.sh (deleted)

	Remove obsolete files.

	The Bio-Formats C++ bindings build process is ...


Sat, 11 Jun 2011 20:13:46 GMT curtis [7727]
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Link executables to jtools.


Tue, 31 May 2011 21:13:59 GMT hinerm [7718]
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/include/javaTools.h (modified)
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/source/javaTools.cxx (modified)

	* Updated javaTools with future plans
	 * Fixed class path bug


Fri, 27 May 2011 20:41:19 GMT hinerm [7713]
	* trunk/projects/jar2lib/deploy_jar.sh (added)
	* trunk/projects/jar2lib/pom.xml (modified)
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools (added)
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/include (added)
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/include/javaTools.h (added)
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/source (added)
	* trunk/projects/jar2lib/src/main/resources/project-files/jtools/source/javaTools.cxx (added)

	Added jtools library to jar2lib

	jtools will allow users of jar2lib ...


Thu, 26 May 2011 21:04:51 GMT hinerm [7712]
	* trunk/projects/jar2lib/src/main/resources/project-files/include/jace.h (modified)

	Removed IOException and Hashtable from jace.h.

	These are now included ...


Mon, 23 May 2011 16:20:26 GMT hinerm [7709]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/VelocityAutogen.java (modified)
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Updated Jar2Lib to automatically package jars

	 Fix for ticket #172
	  ...


Thu, 19 May 2011 17:02:07 GMT hinerm [7707]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)
	* trunk/projects/jar2lib/src/main/resources/jace-header.vm (modified)

	Added support for custom core class lists in Jar2Lib

	Jar2Lib can now ...


Fri, 22 Apr 2011 15:22:34 GMT hinerm [7705]
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)

	Added -extras command to Jar2Lib

	  Usage: -extras <path to ...


Tue, 22 Mar 2011 22:06:13 GMT curtis [7668]
	* trunk/check-links.pl (added)
	* trunk/legacy/jvmlink/src/main/java/loci/jvmlink/ConnThread.java (modified)
	* trunk/legacy/jvmlink/src/main/java/loci/jvmlink/JVMLinkServer.java (modified)
	* trunk/legacy/multi-lut/src/main/java/loci/apps/MultiLUT.java (modified)
	* trunk/projects/EJBHessianFHT/test/org/imagejdev/beans/FHTEJBEndpointTest.java (modified)
	* trunk/projects/cppwrap-maven-plugin/src/main/java/loci/maven/plugin/cppwrap/CppWrapMojo.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AbstractCurveFitter.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AkutanCurveFitter.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/CurveFitData.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayCurveFitter.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayNRCurveFitter.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/MarkwardtCurveFitter.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/SLIMCurveFitter.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/chainableplugin/AbstractPipelineProcessor.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/chainableplugin/IPipelineProcessor.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/chainableplugin/IProcessor.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/chainableplugin/IPropertyCollection.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/chainableplugin/PropertyCollection.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/chainableplugin/deepzoom/CutTilesProcessor.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/chainableplugin/deepzoom/DeepZoomExporter.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/chainableplugin/deepzoom/ScaleInHalfProcessor.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/deepzoom/plugin/ImageWrapper.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/deepzoom/workflow/plugin/ItemWrapper.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/multiinstanceplugin/deepzoom/CutTilesProcessor.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/multiinstanceplugin/deepzoom/DeepZoomExporter.java (modified)
	* trunk/projects/deep-zoom-plugin/src/main/java/loci/multiinstanceplugin/deepzoom/ScaleInHalfProcessor.java (modified)
	* trunk/projects/flow-cytometry/src/main/java/loci/apps/flow/Detector.java (modified)
	* trunk/projects/flow-cytometry/src/main/java/loci/apps/flow/FlowCytometry.java (modified)
	* trunk/projects/flow-cytometry/src/main/java/loci/apps/flow/Particle.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/ClassList.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/FixProxies.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/StringReplace.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/VelocityAutogen.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/VelocityException.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/VelocityTools.java (modified)
	* trunk/projects/loci-checks/src/main/java/loci/checks/About.java (modified)
	* trunk/projects/loci-checks/src/main/java/loci/checks/BlankLinesCheck.java (modified)
	* trunk/projects/misc-plugins/src/main/java/Export_As_Text.java (modified)
	* trunk/projects/misc-plugins/src/main/java/Roi_Map.java (modified)
	* trunk/projects/opencl-decon/src/demos/HelperUtils.java (modified)
	* trunk/projects/opencl-decon/src/demos/Iterative_3D_Deconvolution.java (modified)
	* trunk/projects/opencl-decon/src/demos/ProgramTest.java (modified)
	* trunk/projects/opencl-decon/src/demos/SobelWS.java (modified)
	* trunk/projects/opencl-decon/src/org/imagejdev/api/ClassPathHacker.java (modified)
	* trunk/projects/opencl-decon/src/org/imagejdev/api/StreamToString.java (modified)
	* trunk/projects/slim-plotter/data/MakeData.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/ColorWidget.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/MouseBehaviorButtons.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/SlimData.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/SlimPlotter.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/SlimTypes.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/SpringUtilities.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/TextTransfer.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/TwoDPane.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/BurnInRenderer.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/CurveCollection.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/CurveEvent.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/CurveFitter.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/CurveFitterTester.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/CurveListener.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/CurveRenderer.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/CurveReporter.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/GACurveFitter.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/ICurveFitter.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/ICurveRenderer.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/LMCurveFitter.java (modified)
	* trunk/projects/slim-plotter/src/main/java/loci/slim/fit/RendererSwitcher.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ChunkyPixel.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ChunkyPixelEffectIterator.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ChunkyPixelTableImpl.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/CursorHelper.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/DecayGraph.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/Excitation.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ExcitationFileHandler.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/GrayScaleImage.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/IChunkyPixelTable.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/IGrayScaleImage.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ISelectListener.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/MyStackWindow.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/SLIM_PlugIn.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/ISLIMAnalyzer.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/SLIMAnalysis.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/SLIMAnalyzer.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/plugins/Display.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/plugins/ExportToText.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/plugins/VisADAnalysisPlugin.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/binning/ISLIMBinner.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/binning/SLIMBinner.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/binning/SLIMBinning.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/binning/plugins/Bin3x3.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/binning/plugins/Bin5x5.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/binning/plugins/Bin7x7.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/binning/plugins/BinNxN.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/ColorBar.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/DataColorizer.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/DataColorizerUI.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/FiveColorColorize.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/Histogram.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/IColorize.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/IColorizeRangeListener.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/InputPanel.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/LifetimeHistogram.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/MultiColorColorize.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/ThreeColorColorize.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ui/ExcitationGraph.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ui/ExcitationPanel.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ui/IStartStopBaseListener.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ui/IStartStopListener.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ui/IUserInterfacePanel.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ui/IUserInterfacePanelListener.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ui/SpringUtilities.java (modified)
	* trunk/projects/slim-plugin/src/main/java/loci/slim/ui/UserInterfacePanel.java (modified)
	* trunk/projects/utils/src/main/java/Ascii.java (modified)
	* trunk/projects/utils/src/main/java/Binary.java (modified)
	* trunk/projects/utils/src/main/java/BinaryDiff.java (modified)
	* trunk/projects/utils/src/main/java/CompareTrees.java (modified)
	* trunk/projects/utils/src/main/java/DownloadURL.java (modified)
	* trunk/projects/utils/src/main/java/DumpClass.java (modified)
	* trunk/projects/utils/src/main/java/EditDistance.java (modified)
	* trunk/projects/utils/src/main/java/FileOpsTest.java (modified)
	* trunk/projects/utils/src/main/java/FixEOLSpaces.java (modified)
	* trunk/projects/utils/src/main/java/LineLength.java (modified)
	* trunk/projects/utils/src/main/java/RandomPass.java (modified)
	* trunk/projects/utils/src/main/java/SortList.java (modified)
	* trunk/projects/utils/src/main/java/SysProps.java (modified)
	* trunk/projects/utils/src/main/java/TestMem.java (modified)
	* trunk/projects/utils/src/main/java/UniqueTraces.java (modified)
	* trunk/projects/utils/src/main/java/UnusedImports.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/BioDropHandler.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/BioTask.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ConsoleManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ControlPanel.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ExitManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/LogicManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/MacAdapter.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/PanelManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/SystemControls.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/SystemManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/TaskControls.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/TaskManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/VisBio.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/VisBioEvent.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/VisBioFrame.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/WindowInfo.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/WindowManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/WindowState.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/ArbitrarySlice.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/CollapseTransform.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/CollapseWidget.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/DataCache.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/DataControls.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/DataManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/DataSampling.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/DataTransform.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/Dataset.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/DatasetWidget.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/ExportPane.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/ImageTransform.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/ProjectionTransform.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/ProjectionWidget.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/SamplingThumbHandler.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/SamplingWidget.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/SendToIJPane.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/SliceWidget.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/SpectralTransform.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/SpectralWidget.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/ThumbnailCache.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/ThumbnailHandler.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/TransformEvent.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/data/TransformListener.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ext/ExtManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ext/ExternalFunction.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ext/ExternalProgram.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ext/FunctionParam.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ext/FunctionWidget.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ext/MatlabFunction.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ext/MatlabUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/help/HelpManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/help/HelpTopic.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/help/HelpWindow.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ome/ImageUploader.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ome/OMEImage.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ome/OMELoginPane.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/ome/OMEManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/ArrowTool.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/BoxTool.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/FreeformExtension.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/FreeformTool.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/LineTool.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/MarkerTool.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OvalTool.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayArrow.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayBox.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayFreeform.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayIO.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayLine.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayMarker.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayNodedObject.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayNumericStrategy.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayObject.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayOval.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayPolyline.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayText.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayTool.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayTransform.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/OverlayWidget.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/PointerTool.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/PolylineTool.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/SpreadsheetLaunchException.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/SpreadsheetLauncher.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/StatsOptionsPane.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/TextTool.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/overlays/TransientSelectBox.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/BioOption.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/BooleanOption.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/CustomOption.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/Dynamic.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/ListOption.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/NumericOption.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/OptionManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/OptionPane.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/ProgramState.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/ResolutionOption.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/ResolutionToggleOption.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/SaveException.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/Saveable.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/SpreadsheetLaunchOption.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/SpreadsheetOptionStrategy.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/StateManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/state/StringOption.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/BioArrowButton.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/BioComboBox.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/BreakawayPanel.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/BrowserLauncher.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/ColorUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/DataUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/DialogPane.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/DisplayUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/Docker.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/FontChooserPane.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/FormsUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/ImageJUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/InstanceServer.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/LAFUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/MathUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/MessagePane.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/ObjectUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/OutputConsole.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/OutputEvent.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/OutputListener.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/Segment2D.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/SpawnEvent.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/SpawnListener.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/SplashScreen.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/SwingUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/WarningPane.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/WizardPane.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/util/XMLUtil.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/BioColorWidget.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/BioSlideWidget.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/CaptureHandler.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/CapturePanel.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/ColorHandler.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/ColorPane.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/DisplayControls.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/DisplayManager.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/DisplayPosition.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/DisplayWindow.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/SliceToggler.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/StackHandler.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/StackLink.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/StackPanel.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/TransformHandler.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/TransformLink.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/TransformPanel.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/ViewHandler.java (modified)
	* trunk/projects/visbio/src/main/java/loci/visbio/view/ViewPanel.java (modified)
	* trunk/projects/visbio/src/test/java/loci/visbio/utests/overlays/DummyImageTransform.java (modified)
	* trunk/projects/visbio/src/test/java/loci/visbio/utests/overlays/DummyOverlayTransform.java (modified)
	* trunk/projects/visbio/src/test/java/loci/visbio/utests/overlays/OverlayNodedObjectTest.java (modified)
	* trunk/projects/visbio/src/test/java/loci/visbio/utests/util/MathUtilTest.java (modified)
	* trunk/projects/visbio/src/test/java/loci/visbio/utests/util/Segment2DTest.java (modified)
	* trunk/projects/wiscscan-java/src/main/java/loci/wiscscan/XSLTTools.java (modified)
	* trunk/projects/wiscscan-java/src/main/java/loci/wiscscan/auth/AutoLoginHandler.java (modified)
	* trunk/projects/wiscscan-java/src/main/java/loci/wiscscan/auth/Credentials.java (modified)
	* trunk/projects/wiscscan-java/src/main/java/loci/wiscscan/auth/KerberosAuth.java (modified)

	Clean up headers, and add a script to check them.


Sat, 05 Mar 2011 21:29:21 GMT curtis [7639]
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AbstractCurveFitter.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/AkutanCurveFitter.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/CurveFitData.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayCurveFitter.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/GrayNRCurveFitter.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/JaolhoCurveFitter.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/MarkwardtCurveFitter.java (modified)
	* trunk/projects/curve-fitter/src/main/java/loci/curvefitter/SLIMCurveFitter.java (modified)
	* trunk/projects/flow-cytometry/src/main/java/loci/apps/flow/Detector.java (modified)
	* trunk/projects/flow-cytometry/src/main/java/loci/apps/flow/FlowCytometry.java (modified)
	* trunk/projects/flow-cytometry/src/main/java/loci/apps/flow/Particle.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/ClassList.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/FixProxies.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/StringReplace.java (modified)
	* trunk/projects/loci-checks/src/main/java/loci/checks/About.java (modified)
	* trunk/projects/loci-checks/src/main/java/loci/checks/BlankLinesCheck.java (modified)
	* trunk/projects/misc-plugins/src/main/java/Export_As_Text.java (modified)
	* trunk/projects/misc-plugins/src/main/java/Roi_Map.java (modified)

	Fix some Eclipse warnings and formatting.


Tue, 22 Feb 2011 23:32:55 GMT curtis [7635]
	* trunk/projects/cppwrap-maven-plugin/src/main/java/loci/maven/plugin/cppwrap/CppWrapMojo.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/ClassList.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/VelocityAutogen.java (modified)
	* trunk/projects/jar2lib/src/main/resources/CMakeLists.vm (modified)

	Add ability to specify additional source files.

	Also clean up the ...


Tue, 22 Feb 2011 04:07:28 GMT curtis [7629]
	* trunk/projects/cppwrap-maven-plugin/src/main/java/loci/maven/plugin/cppwrap/CppWrapMojo.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)

	Add separate settings for library vs. classpath JARs.

	Library JARs are ...


Sun, 20 Feb 2011 06:09:57 GMT curtis [7626]
	* trunk/projects/cppwrap-maven-plugin/pom.xml (modified)
	* trunk/projects/cppwrap-maven-plugin/src/main/java/loci/maven/plugin/cppwrap/CppWrapMojo.java (modified)
	* trunk/projects/jar2lib/src/main/java/loci/jar2lib/Jar2Lib.java (modified)
	* trunk/projects/jar2lib/src/main/resources/jace-header.vm (modified)

	Ostensibly working version of cppwrap-maven-plugin.


Fri, 18 Feb 2011 21:21:13 GMT curtis [7621]
	* trunk/projects/jar2lib/pom.xml (modified)

	Use Jace r39, since nothing newer works yet.


Tue, 01 Feb 2011 15:45:48 GMT curtis [7612]
	* trunk/legacy/jvmlink/pom.xml (modified)
	* trunk/legacy/multi-lut/pom.xml (modified)
	* trunk/pom.xml (modified)
	* trunk/projects/curve-fitter/pom.xml (modified)
	* trunk/projects/deep-zoom-plugin/pom.xml (modified)
	* trunk/projects/flow-cytometry/pom.xml (modified)
	* trunk/projects/jar2lib/pom.xml (modified)
	* trunk/projects/loci-checks/pom.xml (modified)
	* trunk/projects/misc-plugins/pom.xml (modified)
	* trunk/projects/slim-curve/pom.xml (modified)
	* trunk/projects/slim-plotter/pom.xml (modified)
	* trunk/projects/slim-plugin/pom.xml (modified)
	* trunk/projects/utils/pom.xml (modified)
	* trunk/projects/visbio/pom.xml (modified)

	Serve Maven artifacts using Apache on port 80.

	Previously it was done ...


Thu, 27 Jan 2011 04:25:13 GMT curtis [7595]
	* trunk/legacy/jvmlink/pom.xml (modified)
	* trunk/legacy/multi-lut/pom.xml (modified)
	* trunk/pom.xml (modified)
	* trunk/pom/loci-base.pom (deleted)
	* trunk/projects/curve-fitter/pom.xml (modified)
	* trunk/projects/deep-zoom-plugin/pom.xml (modified)
	* trunk/projects/flow-cytometry/pom.xml (modified)
	* trunk/projects/jar2lib/pom.xml (modified)
	* trunk/projects/loci-checks/pom.xml (modified)
	* trunk/projects/misc-plugins/pom.xml (modified)
	* trunk/projects/slim-curve/pom.xml (modified)
	* trunk/projects/slim-plotter/pom.xml (modified)
	* trunk/projects/slim-plugin/pom.xml (modified)
	* trunk/projects/utils/pom.xml (modified)
	* trunk/projects/visbio/pom.xml (modified)

	Fix up LOCI Software POM structure.


Wed, 26 Jan 2011 04:43:16 GMT curtis [7587]
	* branches/maven (deleted)
	* branches/maven/legacy/ome-editor (deleted)
	* branches/maven/legacy/ome-notes (deleted)
	* branches/maven/projects/autogen (deleted)
	* branches/maven/projects/bio-formats (deleted)
	* branches/maven/projects/loci-common (deleted)
	* branches/maven/projects/loci-plugins (deleted)
	* branches/maven/projects/loci-tools (deleted)
	* branches/maven/projects/ome-io (deleted)
	* branches/maven/projects/ome-plugins (deleted)
	* branches/maven/projects/ome-tools (deleted)
	* branches/maven/projects/ome-xml (deleted)
	* branches/maven/projects/test-suite (deleted)
	* trunk/ant (deleted)
	* trunk/build.xml (deleted)
	* trunk/checkstyle.xml (deleted)
	* trunk/components (deleted)
	* trunk/excludebugs.xml (deleted)
	* trunk/jar (deleted)
	* trunk/legacy (copied)
	* trunk/lib (deleted)
	* trunk/pom (copied)
	* trunk/pom.xml (copied)
	* trunk/projects (copied)
	* trunk/scan-deps.pl (deleted)
	* trunk/tools (deleted)
	* trunk/utils (deleted)

	Remove Bio-Formats projects, and merge Maven branch.

	Bio-Formats has ...


Fri, 10 Dec 2010 22:32:53 GMT curtis [7399]
	* branches/maven/forks/jai/pom.xml (modified)
	* branches/maven/forks/mdbtools/pom.xml (modified)
	* branches/maven/forks/poi/pom.xml (modified)
	* branches/maven/legacy/jvmlink/pom.xml (modified)
	* branches/maven/legacy/multi-lut/pom.xml (modified)
	* branches/maven/legacy/ome-editor/pom.xml (modified)
	* branches/maven/legacy/ome-notes/pom.xml (modified)
	* branches/maven/pom.xml (modified)
	* branches/maven/pom/loci-base.pom (modified)
	* branches/maven/projects/bio-formats/pom.xml (modified)
	* branches/maven/projects/curve-fitter/pom.xml (modified)
	* branches/maven/projects/deep-zoom-plugin/pom.xml (modified)
	* branches/maven/projects/flow-cytometry/pom.xml (modified)
	* branches/maven/projects/jar2lib/pom.xml (modified)
	* branches/maven/projects/loci-checks/pom.xml (modified)
	* branches/maven/projects/loci-common/pom.xml (modified)
	* branches/maven/projects/loci-plugins/pom.xml (modified)
	* branches/maven/projects/loci-tools/pom.xml (modified)
	* branches/maven/projects/misc-plugins/pom.xml (modified)
	* branches/maven/projects/ome-io/pom.xml (modified)
	* branches/maven/projects/ome-plugins/pom.xml (modified)
	* branches/maven/projects/ome-tools/pom.xml (modified)
	* branches/maven/projects/ome-xml/pom.xml (modified)
	* branches/maven/projects/slim-curve/pom.xml (modified)
	* branches/maven/projects/slim-plotter/pom.xml (modified)
	* branches/maven/projects/slim-plugin/pom.xml (modified)
	* branches/maven/projects/test-suite/pom.xml (modified)
	* branches/maven/projects/utils/pom.xml (modified)
	* branches/maven/projects/visbio/pom.xml (modified)
	* branches/maven/stubs/lwf-stubs/pom.xml (modified)

	Update 3rd party repositories in LOCI base POM.