# # ChangeLog for trunk/projects/slim-plugin/src/main/java/imagej # # Generated by Trac 0.12.2 # 12/13/19 23:17:01 Mon, 13 Feb 2012 15:55:05 GMT aivar [7888] * trunk/projects/slim-plugin/src/main/java/imagej/slim (deleted) Fixed some channel bugs; started Estimator. Thu, 09 Feb 2012 01:08:00 GMT aivar [7887] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FitInfo.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IDecayImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/AbstractBaseColorizedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/ColorizedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/ColorizedImageFactory.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/ColorizedImageFitter.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/FractionalContributionImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/FractionalIntensityImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramDataChannel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/UIPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ChunkyPixel.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ChunkyPixelEffectIterator.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/DecayImageWrapper.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/GrayScaleImage.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/OutputImageWrapper.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) SLIM Plugin: Got multiple channel fitting working. Sat, 04 Feb 2012 02:22:06 GMT aivar [7886] * trunk/projects/slim-plugin/src/main/java/imagej/slim/Test.java (deleted) * trunk/projects/slim-plugin/src/main/java/imagej/slim/TestFittingEngineConcepts.java (deleted) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/refactor/ui/charts/DecayGraph.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/UserInterfacePanel.java (modified) SLIMPlugin: Tidied up a bit. Fixed minor bugs in decay graph, ... Thu, 02 Feb 2012 00:30:55 GMT aivar [7879] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/AbstractBaseColorizedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/PaletteFix.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/UIPanel.java (modified) Improved setting the LUT bounds with the histogram tool. Sat, 28 Jan 2012 01:47:49 GMT aivar [7875] * trunk/projects/slim-plugin/src/main/java/imagej/slim/Test.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FitInfo.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/callable/FittingEngineCallable.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/AbstractBaseColorizedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ChunkyPixel.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ChunkyPixelTableImpl.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/CursorHelper.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/DecayImageWrapper.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/OutputImageWrapper.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/ISLIMAnalyzer.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/SLIMAnalysis.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/plugins/Display.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/plugins/ExportToText.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/plugins/VisADAnalysisPlugin.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/IUserInterfacePanel.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/UserInterfacePanel.java (modified) Continued refactoring. Fitted image working better now. Sat, 14 Jan 2012 02:39:07 GMT aivar [7867] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FitInfo.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IDecayImage.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/DecayImageWrapper.java (moved) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) Refactoring. Fri, 13 Jan 2012 21:33:03 GMT aivar [7866] * trunk/projects/slim-plugin/src/main/java/imagej/charts/cursors/Cursor.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/charts/cursors/CursorLayer.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FitInfo.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IDecayImage.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IFittedImage.java (moved) * trunk/projects/slim-plugin/src/main/java/loci/slim/ChunkyPixel.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/InputImageWrapper.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/OutputImageWrapper.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) Refactoring. Thu, 12 Jan 2012 02:38:35 GMT aivar [7865] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FitInfo.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IInputImage.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IOutputImage.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/AbstractBaseColorizedImage.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/ColorizedImage.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/ColorizedImageFactory.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/ColorizedImageFitter.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/ColorizedImageParser.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/FractionalContributionImage.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/FractionalIntensityImage.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/images/IColorizedImage.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/InputImageWrapper.java (added) * trunk/projects/slim-plugin/src/main/java/loci/slim/OutputImageWrapper.java (added) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) Refactoring Sat, 07 Jan 2012 01:54:37 GMT aivar [7864] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FitInfo.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/engine/IFittingEngine.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/ISLIMAnalyzer.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/SLIMAnalysis.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/plugins/Display.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/plugins/ExportToText.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/analysis/plugins/VisADAnalysisPlugin.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/IUserInterfacePanel.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/UserInterfacePanel.java (modified) Refactoring. Wed, 04 Jan 2012 00:02:24 GMT aivar [7862] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/GlobalFitParams.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/IGlobalFitParams.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) Clean up image fitting code. Fri, 30 Dec 2011 22:12:34 GMT aivar [7861] * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/UIPanel.java (modified) HistogramTool has problems finding the lifetime LUT on Linux when Fiji ... Fri, 30 Dec 2011 21:14:04 GMT aivar [7858] * trunk/projects/slim-plugin/src/main/java/imagej/charts (added) * trunk/projects/slim-plugin/src/main/java/imagej/charts/IChartRectangleListener.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/charts/cursors (added) * trunk/projects/slim-plugin/src/main/java/imagej/charts/cursors/Cursor.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/charts/cursors/CursorLayer.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/charts/cursors/ICursorDragListener.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/charts/cursors/ICursorMoveListener.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/charts/cursors/ICursorStretchListener.java (added) Starting Chart and CursorLayer/Cursor classes for IJ2, based on ... Fri, 23 Dec 2011 22:35:56 GMT aivar [7851] * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/UIPanel.java (modified) Was a problem in the channel UI fitting images w/o channels. Fri, 23 Dec 2011 22:33:55 GMT aivar [7850] * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) Changed the hardcoded LUT path from platform specific to IJ relative. Thu, 22 Dec 2011 05:32:51 GMT aivar [7848] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/AbstractBaseFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) SLIMPlugin: shows colorized range of values using 254 color palette. Wed, 21 Dec 2011 23:55:34 GMT aivar [7847] * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/ColorBarPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/DoubleFormatter.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/IHistogramPanelListener.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/IUIPanelListener.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/UIPanel.java (modified) Format doubles to given number of digits. Entering new start/stop text ... Wed, 21 Dec 2011 06:32:26 GMT aivar [7846] * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/UIPanel.java (modified) Rearrange ui panel layout. Wed, 21 Dec 2011 05:56:21 GMT aivar [7845] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/AbstractBaseFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/InvalidDouble.java (deleted) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramDataChannel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/IUIPanelListener.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/UIPanel.java (modified) Got 254 color palette working in histogram color bar. Wed, 21 Dec 2011 02:46:24 GMT aivar [7844] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/InvalidDouble.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/ColorBarPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/PaletteFix.java (added) Added a PaletteFix class with static methods to aid in working with 254 ... Wed, 21 Dec 2011 01:02:49 GMT aivar [7843] * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) Use 254 color LUTs Wed, 21 Dec 2011 00:45:53 GMT aivar [7842] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/AbstractBaseFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FittedImageManager.java (deleted) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/InvalidDouble.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/callable/FittingEngineCallable.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/GlobalFitParams.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/IGlobalFitParams.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramDataChannel.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/IUserInterfacePanel.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/UserInterfacePanel.java (modified) UI panel now has noise model, fitted images, and chi square target Tue, 20 Dec 2011 00:47:04 GMT aivar [7840] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/OutputImageParser.java (added) OutputImageParser added Tue, 20 Dec 2011 00:45:13 GMT aivar [7839] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FLIMFittedImageFactory.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FLIMImageFitter.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/IUserInterfacePanel.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/UserInterfacePanel.java (modified) UI Changes Mon, 19 Dec 2011 07:35:32 GMT aivar [7838] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/AbstractBaseFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/ColorBarPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/IHistogramDataListener.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/IHistogramPanelListener.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/UIPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/IUserInterfacePanel.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/UserInterfacePanel.java (modified) Continued work on histogram, add fields to user interface. Thu, 15 Dec 2011 21:40:53 GMT aivar [7837] * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/IHistogramPanelListener.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/MyStackWindow.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/UserInterfacePanel.java (modified) Still working on fitted images, starting UI changes Thu, 15 Dec 2011 17:46:56 GMT aivar [7836] * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/IHistogramPanelListener.java (added) Added cursors to histogram to change LUT ranges. Thu, 15 Dec 2011 00:08:35 GMT aivar [7834] * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramDataChannel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramPanel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) Working on histogram Wed, 14 Dec 2011 01:17:07 GMT aivar [7833] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/AbstractBaseFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FLIMImageFitter.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramDataChannel.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) Still working on fitted images. Tue, 13 Dec 2011 06:58:58 GMT aivar [7832] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/AbstractBaseFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FractionalContributionImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/config/Configuration.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/DataColorizer2.java (modified) Shows fitted images. Needs work & buggy. Tue, 13 Dec 2011 00:18:57 GMT aivar [7830] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/AbstractBaseFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FLIMFittedImageFactory.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FLIMImageFitter.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) Can now display selection of fitted images; buggy. Sat, 10 Dec 2011 00:51:19 GMT aivar [7829] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/AbstractBaseFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FLIMFittedImageFactory.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FLIMImageFitter.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FittedImage.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FractionalContributionImage.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FractionalIntensityImage.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IFittedImage.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IOutputImage.java (deleted) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/OutputImage.java (deleted) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramDataChannel.java (moved) FLIMImageFitter is coming along Fri, 09 Dec 2011 20:20:48 GMT aivar [7828] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/AbstractBaseFittedImage.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/FittedImageManager.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IFittedImage.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (modified) Working on the FittedImageManager that will build output fitted images. Fri, 09 Dec 2011 02:09:38 GMT aivar [7825] * trunk/projects/slim-plugin/lkjl.irf (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/IOutputImage.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/ImageFitter.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/OutputImage.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/OutputImageFactory.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/ColorBarPanel.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramChannelData.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramData.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramPanel.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/HistogramTool.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/histogram/UIPanel.java (added) * trunk/projects/slim-plugin/src/main/java/loci/slim/colorizer/DataColorizer2.java (modified) Misc work in progress Fri, 09 Dec 2011 02:08:39 GMT aivar [7824] * trunk/projects/slim-plugin/src/main/java/imagej/histogram (deleted) * trunk/projects/slim-plugin/src/main/java/loci/slim/ui/histogram (deleted) Miscellaneous work in progress. Sat, 19 Nov 2011 01:57:07 GMT aivar [7811] * trunk/projects/slim-plugin/src/main/java/imagej/slim/Test.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/callable/FittingEngineCallable.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/callable/IFittingEngineCallable.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/config/Configuration.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/engine/IFittingEngine.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/engine/ThreadedFittingEngine.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/FitResults.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/GlobalFitParams.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/IFitResults.java (moved) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/IGlobalFitParams.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/ILocalFitParams.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/LocalFitParams.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/CursorHelper.java (modified) * trunk/projects/slim-plugin/src/main/java/loci/slim/SLIMProcessor.java (modified) Got the new style fitting engine working. Bit of a hack; SLIMProcessor ... Sat, 12 Nov 2011 00:37:43 GMT aivar [7807] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/callable/IFittingEngineCallable.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/callable/SLIMCurveCallable.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/engine/ThreadedFittingEngine.java (modified) Work in progress, refactoring fit process Sat, 12 Nov 2011 00:24:45 GMT aivar [7806] * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/callable/SLIMCurveCallable.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/GlobalFitParams.java (modified) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/IGlobalFitParams.java (modified) Working on calling the curvefitter Fri, 11 Nov 2011 21:25:50 GMT aivar [7805] * trunk/projects/slim-plugin/src/main/java/imagej (added) * trunk/projects/slim-plugin/src/main/java/imagej/histogram (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/Test.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/TestFittingEngineConcepts.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/callable (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/callable/IFittingEngineCallable.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/callable/SLIMCurveCallable.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/config (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/config/Configuration.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/config/ConfigurationHelper.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/cursor (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/cursor/Cursor.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/cursor/ICursor.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/cursor/ICursorEstimator.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/cursor/LameCursorEstimator.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/engine (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/engine/IFittingEngine.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/engine/ThreadedFittingEngine.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/GlobalFitParams.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/IGlobalFitParams.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/ILocalFitParams.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/ILocalFitResults.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/LocalFitParams.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/slim/fitting/params/LocalFitResult.java (added) * trunk/projects/slim-plugin/src/main/java/imagej/thread (added) * trunk/projects/slim-plugin/src/main/java/imagej/thread/ThreadPool.java (added) Added 'imagej.slim' package files from my local ...