source: trunk/projects/slim-plugin @ 7997

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Diff Rev Age Author Log Message
(edit) @7996   8 years aivar SLIM Plugin: Fixes Trac #686 log and linear scales and #687 show photon …
(edit) @7994   8 years aivar SLIM Plugin: Clean up code, comments. Worked on masking.
(edit) @7993   8 years aivar SLIM Plugin: Clean up code, comments.
(edit) @7992   8 years aivar SLIM Plugin: Clean up code, comments.
(edit) @7990   8 years aivar SLIM Plugin: Trac #700 binning wasn't working. Implemented simple, …
(edit) @7989   8 years aivar SLIM Plugin: Prompts working much better.
(edit) @7988   8 years aivar SLIM Plugin: Tidy up, remove debugging printouts in …
(edit) @7987   8 years aivar SLIM Plugin: #707 The excitation delay field in the UI panel couldn't be …
(edit) @7986   8 years aivar SLIM Plugin: #706 Excitation graph cursors wouldn't update.
(edit) @7985   8 years aivar SLIM Plugin: Fix Jenkins build.
(edit) @7983   8 years aivar SLIM Plugin: Changed UserInterfacePanel.java from a "m_" member variable …
(edit) @7982   8 years aivar SLIM Plugin: #683 Confused whether there is a prompt. Doing a fit would …
(edit) @7979   8 years aivar SLIM Plugin: #704 Histogram Tool UI panel doesn't always update min/max …
(edit) @7978   8 years aivar SLIM Plugin: #703 Got out of index exception drawing JFreeChart decay …
(edit) @7977   8 years aivar SLIM Plugin: #683 Plugin confused whether there is a prompt. Would get …
(edit) @7976   8 years aivar SLIM Plugin: #683 Plugin confused whether there is a prompt. Would get …
(edit) @7975   8 years aivar SLIM Plugin: Further work on masking.
(edit) @7974   8 years aivar SLIM Plugin: Further work on masking.
(edit) @7970   8 years aivar SLIM Plugin: Added option for colorized grayscale images. Trac #702. …
(edit) @7963   8 years aivar SLIM Plugin: Refactor to allow different flavors of fitted images besides …
(edit) @7962   8 years aivar SLIM Plugin: Masking UI. Trac #689 #690.
(edit) @7961   8 years aivar SLIM Plugin: Masking infrastructure. Trac #689 #690.
(edit) @7960   8 years aivar SLIM Plugin: Comment added.
(edit) @7959   8 years aivar SLIM Plugin: Combined two sets of mask code.
(edit) @7958   8 years aivar SLIM Plugin: Mask class to define and share masks for fitted images.
(edit) @7957   8 years aivar SLIM Plugin: Documentation tweak.
(edit) @7956   8 years aivar SLIM Plugin: Checks for fitting images closing.
(edit) @7950   8 years aivar SLIM Plugin: Trac #695 Problem finding LUT when running from a shortcut.
(edit) @7943   8 years curtis Update projects to use release version of parent Projects are now …
(edit) @7940   8 years aivar SLIM Plugin: Now plugin is under "Analyze"/"Lifetime"/"Spectral Lifetime …
(edit) @7939   8 years aivar SLIM Plugin: Moved plugin from it's own "Lifetime" category to existing …
(edit) @7938   8 years aivar SLIM Plugin: Moved plugin from it's own "Lifetime" category to existing …
(edit) @7937   8 years aivar SLIM Plugin: New "FitterEstimator" class was missing when fitting images; …
(edit) @7936   8 years aivar SLIM Plugin: Working on cursor problems.
(edit) @7933   8 years aivar SLIM Plugin: Ticket #681: Missing lifetime LUT crashes the plugin; display …
(edit) @7930   8 years aivar SLIM Plugin: Transient cursors not applied properly. Part of Ticket #678. …
(edit) @7922   8 years aivar SLIM Plugin: Working on Trac #674 Ensure TRI2 and SLIMPlugin results …
(edit) @7915   8 years aivar SLIM Plugin: Working on double/int cursor discrepancies.
(edit) @7913   8 years curtis Set parent.relativePath for subprojects properly
(edit) @7910   8 years aivar SLIM Plugin: Fixed cursor code bugs. Prompt cursors were not working at …
(edit) @7908   8 years curtis Use scijava parent POM See:  http://github.com/scijava/scijava-common
(edit) @7906   8 years curtis Generalize comment about project parent
(edit) @7905   8 years curtis Change base POM name to pom-loci This is more consistent with imagej2, …
(edit) @7904   8 years aivar SLIM Plugin: Rewrite of cursor code, tidy up UI and code. In progress.
(edit) @7903   8 years aivar SLIM Plugin: Changing start/stop bin integers to time value doubles to …
(edit) @7892   8 years aivar SLIM Plugin: Work in progress; make sure fits agree with TRI2.
(edit) @7889   8 years aivar Fixed some channel bugs; started Estimator.
(edit) @7888   8 years aivar Fixed some channel bugs; started Estimator.
(edit) @7887   8 years aivar SLIM Plugin: Got multiple channel fitting working.
(edit) @7886   8 years aivar SLIMPlugin: Tidied up a bit. Fixed minor bugs in decay graph, histogram, …
(edit) @7879   8 years aivar Improved setting the LUT bounds with the histogram tool.
(edit) @7875   8 years aivar Continued refactoring. Fitted image working better now.
(edit) @7867   8 years aivar Refactoring.
(edit) @7866   8 years aivar Refactoring.
(edit) @7865   8 years aivar Refactoring
(edit) @7864   8 years aivar Refactoring.
(edit) @7862   8 years aivar Clean up image fitting code.
(edit) @7861   8 years aivar HistogramTool has problems finding the lifetime LUT on Linux when Fiji is …
(edit) @7858   8 years aivar Starting Chart and CursorLayer/Cursor classes for IJ2, based on SLIMPlugin …
(edit) @7851   8 years aivar Was a problem in the channel UI fitting images w/o channels.
(edit) @7850   8 years aivar Changed the hardcoded LUT path from platform specific to IJ relative.
(edit) @7849   8 years aivar New Lifetime LUT.
(edit) @7848   8 years aivar SLIMPlugin: shows colorized range of values using 254 color palette.
(edit) @7847   8 years aivar Format doubles to given number of digits. Entering new start/stop text …
(edit) @7846   8 years aivar Rearrange ui panel layout.
(edit) @7845   8 years aivar Got 254 color palette working in histogram color bar.
(edit) @7844   8 years aivar Added a PaletteFix class with static methods to aid in working with 254 …
(edit) @7843   8 years aivar Use 254 color LUTs
(edit) @7842   8 years aivar UI panel now has noise model, fitted images, and chi square target
(edit) @7840   8 years aivar OutputImageParser added
(edit) @7839   8 years aivar UI Changes
(edit) @7838   8 years aivar Continued work on histogram, add fields to user interface.
(edit) @7837   8 years aivar Still working on fitted images, starting UI changes
(edit) @7836   8 years aivar Added cursors to histogram to change LUT ranges.
(edit) @7835   8 years aivar Fixed bug that killed Jenkins compile
(edit) @7834   8 years aivar Working on histogram
(edit) @7833   8 years aivar Still working on fitted images.
(edit) @7832   8 years aivar Shows fitted images. Needs work & buggy.
(edit) @7831   8 years aivar Shows fitted images. Needs work & buggy.
(edit) @7830   8 years aivar Can now display selection of fitted images; buggy.
(edit) @7829   8 years aivar FLIMImageFitter is coming along
(edit) @7828   8 years aivar Working on the FittedImageManager that will build output fitted images.
(edit) @7826   8 years aivar Deleted some junk.
(edit) @7825   8 years aivar Misc work in progress
(edit) @7824   8 years aivar Miscellaneous work in progress.
(edit) @7822   8 years curtis Update to SezPoz 1.9 This matches the version we are using in ImageJ2.
(edit) @7821   8 years aivar Experimented with MyFloatProcessor and DataColorizer2 to get IJ LUTs …
(edit) @7811   8 years aivar Got the new style fitting engine working. Bit of a hack; SLIMProcessor …
(edit) @7807   8 years aivar Work in progress, refactoring fit process
(edit) @7806   8 years aivar Working on calling the curvefitter
(edit) @7805   8 years aivar Added 'imagej.slim' package files from my local TestFittingEngineConcepts …
(edit) @7804   8 years aivar Don't pop up multiple DecayGraphs
(edit) @7796   8 years aivar Added "refactor" package to avoid conflicts. Tidy up DecayGraph and allow …
(edit) @7795   8 years aivar Emulate TRI2 parameter estimation.
(edit) @7794   8 years aivar Better handle ICS excitation files.
(edit) @7770   9 years curtis Move assembly descriptor into src/main/assembly.
(edit) @7766   9 years curtis Move JAR plugin config out of default profile.
(edit) @7765   9 years curtis Remove superfluous slim-curve dependency.
(edit) @7759   9 years curtis Add maven-nar-plugin version to avoid warnings.
(edit) @7741   9 years aivar Uses ComplexType vs UnsignedShort previously. Added "@Override" where …
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