source: trunk/projects @ 7712

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Diff Rev Age Author Log Message
(edit) @7712   8 years hinerm Removed IOException and Hashtable from jace.h. These are now included via …
(edit) @7711   8 years hinerm Updated cppwrap to allow additions of core Java files and extra CMake …
(edit) @7710   8 years aivar Work in progress.
(edit) @7709   8 years hinerm Updated Jar2Lib to automatically package jars Fix for ticket #172
(edit) @7708   8 years aivar Work in progress. Working on GCI_marquardt_compute_fn, code is commented …
(edit) @7707   8 years hinerm Added support for custom core class lists in Jar2Lib Jar2Lib can now …
(edit) @7706   9 years aivar Changed GCI_gauss_jordan to be GCI_solve and GCI_invert. The current …
(edit) @7705   9 years hinerm Added -extras command to Jar2Lib Usage: -extras <path to …
(edit) @7704   9 years aivar Classifiers for 32/64 Windows and PPC/32/64 OSX. Linux is commented out …
(edit) @7703   9 years aivar The maven nar plugin aol for 64-bit windows is amd64-Windows-msvc.
(edit) @7702   9 years aivar Updated to include Windows 7 64-bit.
(edit) @7701   9 years aivar Add complete set of "fileSet" tags.
(edit) @7700   9 years aivar Removed IJ.log debugging message.
(edit) @7699   9 years aivar Removed IJ.log debugging message.
(edit) @7698   9 years aivar Removed IJ.log debugging message.
(edit) @7697   9 years aivar Was using a listener w/o checking for null value first.
(edit) @7696   9 years aivar Getting the quit button to work correctly.
(edit) @7695   9 years aivar Bug: was substituting z for a!
(edit) @7694   9 years aivar Enable the old System.loadLibrary JNA version as well as the new …
(edit) @7693   9 years aivar Include file method signatures weren't up to date. The c file needed to …
(edit) @7692   9 years aivar Changes to get JNI working (vs JNA). Currently has both versions …
(edit) @7691   9 years aivar Changes to get JNI working (vs JNA).
(edit) @7690   9 years aivar Added default profile to build default jar and "with-dependencies" profile …
(edit) @7689   9 years aivar Added default profile to build default jar and "with-libs" profile to …
(edit) @7688   9 years aivar Disabled maven-nar-plugin functionality.
(edit) @7687   9 years aivar Disabled maven-nar-plugin functionality.
(edit) @7686   9 years aivar Added dependency to ij (strange that it built on my system without).
(edit) @7685   9 years aivar I had a slim-curve-1.0-SNAPSHOT.jar in my local repository, Hudson didn't, …
(edit) @7684   9 years aivar Build one big happy jar with native shared libraries.
(edit) @7683   9 years aivar Display critical messages with IJ.log. New style of using …
(edit) @7682   9 years aivar Fit parameters that were fixed were always displayed as black.
(edit) @7681   9 years aivar Fit parameters that were fixed were always displayed as black.
(edit) @7680   9 years curtis Update ImgLib references to use imglib1.
(edit) @7679   9 years aivar Added text document that describes how to build the project under Windows.
(edit) @7678   9 years aivar Visual Studio 2008 when called from Maven wants C89 syntax, not C99.
(edit) @7677   9 years aivar Fixed array out of bounds when grayscale image is zoomed and you click on …
(edit) @7676   9 years curtis Eliminate dependencies on old IJ2 projects.
(edit) @7675   9 years aivar Got rid of the global old_chisquare, it's passed in as a parameter now. …
(edit) @7674   9 years aivar CurveFitData needs to keep track of how many pixels went into each data …
(edit) @7673   9 years aivar CurveFitData needs to keep track of how many pixels went into each data …
(edit) @7672   9 years aivar Loading/using IRFs. Estimate decay cursors.
(edit) @7671   9 years aivar Moved loading an Excitation and setting up the ExcitationPanel to …
(edit) @7670   9 years aivar Removed set/getFree from CurveFitData. This info is invariant per …
(edit) @7669   9 years aivar Don't clobber fixed parameters when doing an RLD to be followed by an LMA.
(edit) @7668   9 years curtis Clean up headers, and add a script to check them.
(edit) @7667   9 years abhinav Add loci-common as compile-time dependency.
(edit) @7666   9 years curtis Remove transformXML method from VisBio XML class.
(edit) @7665   9 years curtis Add utility method for applying XSLT from WiscScan.
(edit) @7664   9 years curtis Clean up headers.
(edit) @7663   9 years aivar Export to text working.
(edit) @7662   9 years abhinav 1. Added a method to use the style-sheet to convert OME-XML to METS(MODS). …
(edit) @7661   9 years aivar Couldn't get browser to load; problem was the directory I was running …
(edit) @7660   9 years aivar Fixed problem when running within NetBeans. Changed all package names to …
(edit) @7659   9 years aivar Fixed problem when running within NetBeans. Changed all package names to …
(edit) @7658   9 years aivar Fixed various bugs. Made export to text better.
(edit) @7657   9 years curtis Silence more Maven warnings.
(edit) @7655   9 years aivar target/.irf added (?)
(edit) @7654   9 years aivar Added new RLD+LMA fit option. Consistency with TRI2. Added excitation …
(edit) @7653   9 years aivar Added new RLD+LMA fit option.
(edit) @7652   9 years aivar Work in progress. Broken.
(edit) @7651   9 years aivar Consistency with TRI2.
(edit) @7650   9 years aivar Fixed bugs in ROI fitting, et. al.
(edit) @7649   9 years aivar Changed excitation to be autoranging. Modified (some) colors in synch …
(edit) @7648   9 years aivar New class listens for excitation graph cursor changes.
(edit) @7647   9 years aivar New class contains excitation graph and cursor info.
(edit) @7646   9 years aivar New class displays excitation and its cursors.
(edit) @7645   9 years aivar New class loads and saves excitation files.
(edit) @7644   9 years aivar New class handles excitation (IRF curve).
(edit) @7643   9 years aivar New class computes excitation and decay cursors (start/stop/base limits).
(edit) @7642   9 years aivar Added RLD+LMA option.
(edit) @7641   9 years curtis Fix more warnings.
(edit) @7640   9 years curtis Fix some Eclipse warnings.
(edit) @7639   9 years curtis Fix some Eclipse warnings and formatting.
(edit) @7638   9 years hanly Made some changes & cleaned up debug code.
(edit) @7637   9 years hanly Batch file to build cpp wrappers and copy the headers and compiled library …
(edit) @7636   9 years hanly Made some changes to debug.
(edit) @7635   9 years curtis Add ability to specify additional source files. Also clean up the Jar2Lib …
(edit) @7634   9 years curtis Clean up wiscscan-java package a bit.
(edit) @7632   9 years curtis Remove renamed wiscscan-utils project.
(edit) @7631   9 years curtis Collect needed WiscScan Java code into a single aggregator project.
(edit) @7630   9 years curtis Add ability to specify additional JARs to wrap.
(edit) @7629   9 years curtis Add separate settings for library vs. classpath JARs. Library JARs are …
(edit) @7628   9 years curtis Enable cppwrap for flow-cytometry project.
(edit) @7627   9 years curtis Add all dependencies to the library path. This is not a longterm …
(edit) @7626   9 years curtis Ostensibly working version of cppwrap-maven-plugin.
(edit) @7625   9 years curtis Fix minor issues with cppwrap project.
(edit) @7622   9 years curtis Initial skeleton for jar2lib-based cppwrap Maven plugin.
(edit) @7621   9 years curtis Use Jace r39, since nothing newer works yet.
(edit) @7620   9 years curtis Clean up KerberosAuth, fix compile errors.
(edit) @7619   9 years hanly Added the source code for the kerberos login module.
(edit) @7618   9 years curtis Initial skeleton for WiscScan utilities project. This project is intended …
(edit) @7616   9 years curtis Update slim-plugin dependencies to match latest ImageJ2 project structure.
(edit) @7613   9 years rlentz Progress on OpenCL iterative 3D deconvolution.
(edit) @7612   9 years curtis Serve Maven artifacts using Apache on port 80. Previously it was done via …
(edit) @7611   9 years aivar Added float chisq_delta parameter to …
(edit) @7610   9 years curtis Remove unnecessary include folder.
(edit) @7609   9 years curtis Initial CMakeLists build file for slim-curve.
(edit) @7608   9 years paulbarber Utility.h not needed.
(edit) @7607   9 years paulbarber Added single frequency phasor routine for lifetime. Added Non-negative …
(edit) @7606   9 years paulbarber To compile in TRI2, moved declarations to top of relevant block. Added …
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