|
|
@7833
|
8 years |
aivar |
Still working on fitted images.
|
|
|
@7832
|
8 years |
aivar |
Shows fitted images. Needs work & buggy.
|
|
|
@7831
|
8 years |
aivar |
Shows fitted images. Needs work & buggy.
|
|
|
@7830
|
8 years |
aivar |
Can now display selection of fitted images; buggy.
|
|
|
@7829
|
8 years |
aivar |
FLIMImageFitter is coming along
|
|
|
@7828
|
8 years |
aivar |
Working on the FittedImageManager that will build output fitted images.
|
|
|
@7827
|
8 years |
avivekan |
Flow update. still testing…
|
|
|
@7826
|
8 years |
aivar |
Deleted some junk.
|
|
|
@7825
|
8 years |
aivar |
Misc work in progress
|
|
|
@7824
|
8 years |
aivar |
Miscellaneous work in progress.
|
|
|
@7823
|
8 years |
paulbarber |
Unnecessary define.
|
|
|
@7822
|
8 years |
curtis |
Update to SezPoz 1.9
This matches the version we are using in ImageJ2.
|
|
|
@7821
|
8 years |
aivar |
Experimented with MyFloatProcessor and DataColorizer2 to get IJ LUTs …
|
|
|
@7820
|
8 years |
mario |
complete constructors initialize all class-members with sane defaults
|
|
|
@7819
|
8 years |
mario |
sanity-check some buffer sizes, and use a bit faster readInt() method
|
|
|
@7818
|
8 years |
mario |
use again a bit stricter types, and use const reference for some …
|
|
|
@7817
|
8 years |
mario |
added in idea of exception handling between Java and C++ exec methods
|
|
|
@7816
|
8 years |
mario |
significantly speed up socket writing by using byte-writer method …
|
|
|
@7815
|
8 years |
mario |
added slightly improved debugging functions
|
|
|
@7814
|
8 years |
mario |
use auto_ptr for an idea of memory management, and template print …
|
|
|
@7813
|
8 years |
mario |
added a bit stricter types, and use const reference for strings (instead …
|
|
|
@7812
|
8 years |
mario |
added minimal changes to compile on a POSIX like OS (mainly Linux)
|
|
|
@7811
|
8 years |
aivar |
Got the new style fitting engine working. Bit of a hack; SLIMProcessor …
|
|
|
@7810
|
8 years |
aivar |
Got rid of the idea of creating an ICurveFitter for each fit type (i.e. …
|
|
|
@7809
|
8 years |
paulbarber |
Better comments on why the convolution is actually correct.
Fixed one …
|
|
|
@7808
|
8 years |
mario |
Exit JVMLinkServer in case of invalid command-line parameters
|
|
|
@7807
|
8 years |
aivar |
Work in progress, refactoring fit process
|
|
|
@7806
|
8 years |
aivar |
Working on calling the curvefitter
|
|
|
@7805
|
8 years |
aivar |
Added 'imagej.slim' package files from my local TestFittingEngineConcepts …
|
|
|
@7804
|
8 years |
aivar |
Don't pop up multiple DecayGraphs
|
|
|
@7803
|
8 years |
paulbarber |
Fixed some memory leaks and some compile warnings.
|
|
|
@7802
|
8 years |
fong |
|
|
|
@7801
|
8 years |
curtis |
Update ImageJ1 version to a range.
This allows us to keep using newer …
|
|
|
@7800
|
8 years |
curtis |
Update ImageJ groupId to match the latest.
|
|
|
@7799
|
8 years |
curtis |
Standardize order of exception handling.
|
|
|
@7798
|
8 years |
curtis |
Add checkbox for toggling parallel projection.
|
|
|
@7797
|
8 years |
paulbarber |
Increased MAXBINS for a test. Really should check that bins does not …
|
|
|
@7796
|
8 years |
aivar |
Added "refactor" package to avoid conflicts. Tidy up DecayGraph and allow …
|
|
|
@7795
|
8 years |
aivar |
Emulate TRI2 parameter estimation.
|
|
|
@7794
|
8 years |
aivar |
Better handle ICS excitation files.
|
|
|
@7793
|
8 years |
curtis |
Add SVN ignore rules for visbio-plugins project.
|
|
|
@7792
|
8 years |
curtis |
Eliminate hardcoded reference to MouseBehaviorJ3D.
This fixes a …
|
|
|
@7791
|
8 years |
curtis |
Fix snapshot feature to actually work.
VisAD snapshots can only be done …
|
|
|
@7790
|
8 years |
curtis |
Normalize color scale ranges.
|
|
|
@7789
|
8 years |
curtis |
Add bounding box toggle and snapshot features.
|
|
|
@7788
|
8 years |
curtis |
Use a finer grained stretch step.
|
|
|
@7787
|
8 years |
curtis |
Use newer version of ImageJ.
|
|
|
@7786
|
8 years |
curtis |
Remove obsolete TODO.
|
|
|
@7785
|
8 years |
curtis |
Better handling of hyperstacks.
|
|
|
@7784
|
8 years |
curtis |
Start window as tall as reasonably possible.
|
|
|
@7783
|
8 years |
curtis |
Expand stretch range.
|
|
|
@7782
|
8 years |
curtis |
First version of Ortho Stack VisBio plugin.
|
|
|
@7781
|
8 years |
paulbarber |
Added GPL license to all source code.
|
|
|
@7780
|
8 years |
aivar |
Tidied up.
|
|
|
@7779
|
8 years |
aivar |
Go back to using Gaussian method to solve and invert matrices.
|
|
|
@7778
|
8 years |
aivar |
Fixed bug in NOISE_MLE case.
|
|
|
@7777
|
8 years |
hinerm |
Fixed append in Windows directory search
Previously was appending ".*" to …
|
|
|
@7776
|
8 years |
hinerm |
Fixed jace-runtime.jar copy path
The previous path to copy …
|
|
|
@7775
|
8 years |
hinerm |
Added Build path consideration to EXE files
The templated code for exe …
|
|
|
@7774
|
8 years |
hinerm |
Removed StringEscapeUtils reference
It was found that erroneous string …
|
|
|
@7773
|
8 years |
hinerm |
Removed File usage from automation of CMakeLists.txt
The use of a File …
|
|
|
@7772
|
8 years |
hinerm |
Added StringEscapeUtils to Jar2Lib
Added a new dependency from the …
|
|
|
@7771
|
8 years |
curtis |
Normalize Z coordinates as well.
|
|
|
@7770
|
8 years |
curtis |
Move assembly descriptor into src/main/assembly.
|
|
|
@7769
|
8 years |
hinerm |
updated fixLibraryPath J2L method
Attempting to use replaceAll method …
|
|
|
@7768
|
8 years |
hinerm |
Updated J2L jar path conversion method
The J2L method for conversion will …
|
|
|
@7767
|
8 years |
hinerm |
Added new method to J2L to fix jar paths
A new method was added as part …
|
|
|
@7766
|
8 years |
curtis |
Move JAR plugin config out of default profile.
|
|
|
@7765
|
8 years |
curtis |
Remove superfluous slim-curve dependency.
|
|
|
@7764
|
8 years |
hinerm |
Added extra level of escape ('\') for jar file conversions
A single level …
|
|
|
@7763
|
8 years |
hinerm |
Bug fix in CMakeLists: empty variable
The CMakeLists.vm included …
|
|
|
@7762
|
8 years |
curtis |
Fix with-libs profile to include Java class files.
Still doesn't include …
|
|
|
@7761
|
8 years |
curtis |
Move assembly descriptor into src/main/assembly.
|
|
|
@7760
|
8 years |
curtis |
Move JAR plugin config out of default profile.
|
|
|
@7759
|
8 years |
curtis |
Add maven-nar-plugin version to avoid warnings.
|
|
|
@7758
|
8 years |
curtis |
Add explicit versions to avoid Maven 3 warnings.
|
|
|
@7757
|
8 years |
hinerm |
Moved jar name fixing back to Java side of processing
With CMake doing …
|
|
|
@7756
|
8 years |
hinerm |
Fix for CMakeLists.vm - slash correction
The code to convert backslashes …
|
|
|
@7755
|
8 years |
hinerm |
Moved String conversion code to CMake
Instead of the Jar2Lib trying to …
|
|
|
@7754
|
8 years |
hinerm |
Adjusted correction of jar paths
The previous fix to correct '\' to '/' …
|
|
|
@7753
|
8 years |
hinerm |
Removed Jtools reference to dirent.h
JTools source was previously …
|
|
|
@7752
|
8 years |
hinerm |
Jar2Lib now converts "\" to "/" in discovered jar paths
On Windows, the …
|
|
|
@7751
|
8 years |
hinerm |
Modified javaTools library for Windows functionality
JTools was …
|
|
|
@7750
|
8 years |
hinerm |
Added support for building on Windows platforms
The CMakeLists.txt …
|
|
|
@7749
|
8 years |
curtis |
Fix gitignore rules.
|
|
|
@7748
|
8 years |
curtis |
Progress on Prairie TIFF stitching. Seems to work.
Single-image TIFFs are …
|
|
|
@7747
|
8 years |
curtis |
Convert stage coords from microns to pixels.
|
|
|
@7746
|
8 years |
curtis |
Tweak documentation.
|
|
|
@7745
|
8 years |
curtis |
Initial version of Prairie TIFF stitching plugin.
|
|
|
@7744
|
8 years |
curtis |
Improvements to Stitch OME-TIFFs plugin:
* Write tile configuration to …
|
|
|
@7743
|
8 years |
hinerm |
Improved control flow of platform specific installation
Previously, …
|
|
|
@7742
|
8 years |
curtis |
Simple plugin to visualize tile configuration.
This is quicker than …
|
|
|
@7741
|
8 years |
aivar |
Uses ComplexType vs UnsignedShort previously. Added "@Override" where …
|
|
|
@7740
|
8 years |
aivar |
Misc. changes; took out fakeData and some debugging print outs.
|
|
|
@7739
|
8 years |
curtis |
First version of OME-TIFF stitching plugin.
Calls Bio-Formats to get …
|
|
|
@7738
|
8 years |
curtis |
Fix up misc_plugins into JAR with plugins.config.
|
|
|
@7737
|
8 years |
aivar |
Removed code that requires C99 extensions to allow compilation in Visual …
|
|
|
@7736
|
8 years |
curtis |
Add gitignore file, for those using git-svn.
|
|
|
@7735
|
8 years |
curtis |
Move some POM descriptors to Bio-Formats Git repo.
|
|
|
@7734
|
8 years |
hinerm |
More control allowed in JavaTools
The following options were added to …
|
|
|