|
|
@7875
|
8 years |
aivar |
Continued refactoring. Fitted image working better now.
|
|
|
@7874
|
8 years |
aivar |
Added 'noise' and 'chi_square_delta' parameters to SLIMCurve calls. Added …
|
|
|
@7873
|
8 years |
aivar |
Added 'noise' and 'chi_square_delta' parameters to SLIMCurve calls. Added …
|
|
|
@7872
|
8 years |
aivar |
Added 'noise' and 'chi_square_delta' parameters to EcfWrapper and JNI …
|
|
|
@7871
|
8 years |
avivekan |
modified flow code and macro
|
|
|
@7870
|
8 years |
avivekan |
added check for null, accidentally overlooked in previous commit
|
|
|
@7869
|
8 years |
avivekan |
hopefully working change to getBFParticleAreas(), was previously returning …
|
|
|
@7868
|
8 years |
avivekan |
|
|
|
@7867
|
8 years |
aivar |
Refactoring.
|
|
|
@7866
|
8 years |
aivar |
Refactoring.
|
|
|
@7865
|
8 years |
aivar |
Refactoring
|
|
|
@7864
|
8 years |
aivar |
Refactoring.
|
|
|
@7863
|
8 years |
avivekan |
|
|
|
@7862
|
8 years |
aivar |
Clean up image fitting code.
|
|
|
@7861
|
8 years |
aivar |
HistogramTool has problems finding the lifetime LUT on Linux when Fiji is …
|
|
|
@7860
|
8 years |
aivar |
More diagnostics for issue of multiple threads trying to load the native …
|
|
|
@7859
|
8 years |
aivar |
Bug with synchronization of multiple threads trying to load the native …
|
|
|
@7858
|
8 years |
aivar |
Starting Chart and CursorLayer/Cursor classes for IJ2, based on SLIMPlugin …
|
|
|
@7857
|
8 years |
aivar |
When the library loads tidied up logging and synchronized for …
|
|
|
@7856
|
8 years |
aivar |
Simplified the platform specific paths from "x86_64-MacOSX-gpp" to …
|
|
|
@7855
|
8 years |
aivar |
Took out '<arch>i386</arch>' in nar plugin configuration. Was a remnant …
|
|
|
@7854
|
8 years |
chainani |
fixed some scifio issue
|
|
|
@7853
|
8 years |
aivar |
Added a "with-libs" profile in POM and associated assembly.
|
|
|
@7852
|
8 years |
avivekan |
|
|
|
@7851
|
8 years |
aivar |
Was a problem in the channel UI fitting images w/o channels.
|
|
|
@7850
|
8 years |
aivar |
Changed the hardcoded LUT path from platform specific to IJ relative.
|
|
|
@7849
|
8 years |
aivar |
New Lifetime LUT.
|
|
|
@7848
|
8 years |
aivar |
SLIMPlugin: shows colorized range of values using 254 color palette.
|
|
|
@7847
|
8 years |
aivar |
Format doubles to given number of digits. Entering new start/stop text …
|
|
|
@7846
|
8 years |
aivar |
Rearrange ui panel layout.
|
|
|
@7845
|
8 years |
aivar |
Got 254 color palette working in histogram color bar.
|
|
|
@7844
|
8 years |
aivar |
Added a PaletteFix class with static methods to aid in working with 254 …
|
|
|
@7843
|
8 years |
aivar |
Use 254 color LUTs
|
|
|
@7842
|
8 years |
aivar |
UI panel now has noise model, fitted images, and chi square target
|
|
|
@7841
|
8 years |
aivar |
Gets the noise model to the fitter.
|
|
|
@7840
|
8 years |
aivar |
OutputImageParser added
|
|
|
@7839
|
8 years |
aivar |
UI Changes
|
|
|
@7838
|
8 years |
aivar |
Continued work on histogram, add fields to user interface.
|
|
|
@7837
|
8 years |
aivar |
Still working on fitted images, starting UI changes
|
|
|
@7836
|
8 years |
aivar |
Added cursors to histogram to change LUT ranges.
|
|
|
@7835
|
8 years |
aivar |
Fixed bug that killed Jenkins compile
|
|
|
@7834
|
8 years |
aivar |
Working on histogram
|
|
|
@7833
|
8 years |
aivar |
Still working on fitted images.
|
|
|
@7832
|
8 years |
aivar |
Shows fitted images. Needs work & buggy.
|
|
|
@7831
|
8 years |
aivar |
Shows fitted images. Needs work & buggy.
|
|
|
@7830
|
8 years |
aivar |
Can now display selection of fitted images; buggy.
|
|
|
@7829
|
8 years |
aivar |
FLIMImageFitter is coming along
|
|
|
@7828
|
8 years |
aivar |
Working on the FittedImageManager that will build output fitted images.
|
|
|
@7827
|
8 years |
avivekan |
Flow update. still testing…
|
|
|
@7826
|
8 years |
aivar |
Deleted some junk.
|
|
|
@7825
|
8 years |
aivar |
Misc work in progress
|
|
|
@7824
|
8 years |
aivar |
Miscellaneous work in progress.
|
|
|
@7823
|
8 years |
paulbarber |
Unnecessary define.
|
|
|
@7822
|
8 years |
curtis |
Update to SezPoz 1.9
This matches the version we are using in ImageJ2.
|
|
|
@7821
|
8 years |
aivar |
Experimented with MyFloatProcessor and DataColorizer2 to get IJ LUTs …
|
|
|
@7820
|
8 years |
mario |
complete constructors initialize all class-members with sane defaults
|
|
|
@7819
|
8 years |
mario |
sanity-check some buffer sizes, and use a bit faster readInt() method
|
|
|
@7818
|
8 years |
mario |
use again a bit stricter types, and use const reference for some …
|
|
|
@7817
|
8 years |
mario |
added in idea of exception handling between Java and C++ exec methods
|
|
|
@7816
|
8 years |
mario |
significantly speed up socket writing by using byte-writer method …
|
|
|
@7815
|
8 years |
mario |
added slightly improved debugging functions
|
|
|
@7814
|
8 years |
mario |
use auto_ptr for an idea of memory management, and template print …
|
|
|
@7813
|
8 years |
mario |
added a bit stricter types, and use const reference for strings (instead …
|
|
|
@7812
|
8 years |
mario |
added minimal changes to compile on a POSIX like OS (mainly Linux)
|
|
|
@7811
|
8 years |
aivar |
Got the new style fitting engine working. Bit of a hack; SLIMProcessor …
|
|
|
@7810
|
8 years |
aivar |
Got rid of the idea of creating an ICurveFitter for each fit type (i.e. …
|
|
|
@7809
|
8 years |
paulbarber |
Better comments on why the convolution is actually correct.
Fixed one …
|
|
|
@7808
|
8 years |
mario |
Exit JVMLinkServer in case of invalid command-line parameters
|
|
|
@7807
|
8 years |
aivar |
Work in progress, refactoring fit process
|
|
|
@7806
|
8 years |
aivar |
Working on calling the curvefitter
|
|
|
@7805
|
8 years |
aivar |
Added 'imagej.slim' package files from my local TestFittingEngineConcepts …
|
|
|
@7804
|
8 years |
aivar |
Don't pop up multiple DecayGraphs
|
|
|
@7803
|
8 years |
paulbarber |
Fixed some memory leaks and some compile warnings.
|
|
|
@7802
|
8 years |
fong |
|
|
|
@7801
|
8 years |
curtis |
Update ImageJ1 version to a range.
This allows us to keep using newer …
|
|
|
@7800
|
8 years |
curtis |
Update ImageJ groupId to match the latest.
|
|
|
@7799
|
8 years |
curtis |
Standardize order of exception handling.
|
|
|
@7798
|
8 years |
curtis |
Add checkbox for toggling parallel projection.
|
|
|
@7797
|
8 years |
paulbarber |
Increased MAXBINS for a test. Really should check that bins does not …
|
|
|
@7796
|
8 years |
aivar |
Added "refactor" package to avoid conflicts. Tidy up DecayGraph and allow …
|
|
|
@7795
|
8 years |
aivar |
Emulate TRI2 parameter estimation.
|
|
|
@7794
|
8 years |
aivar |
Better handle ICS excitation files.
|
|
|
@7793
|
8 years |
curtis |
Add SVN ignore rules for visbio-plugins project.
|
|
|
@7792
|
8 years |
curtis |
Eliminate hardcoded reference to MouseBehaviorJ3D.
This fixes a …
|
|
|
@7791
|
8 years |
curtis |
Fix snapshot feature to actually work.
VisAD snapshots can only be done …
|
|
|
@7790
|
8 years |
curtis |
Normalize color scale ranges.
|
|
|
@7789
|
8 years |
curtis |
Add bounding box toggle and snapshot features.
|
|
|
@7788
|
8 years |
curtis |
Use a finer grained stretch step.
|
|
|
@7787
|
8 years |
curtis |
Use newer version of ImageJ.
|
|
|
@7786
|
8 years |
curtis |
Remove obsolete TODO.
|
|
|
@7785
|
8 years |
curtis |
Better handling of hyperstacks.
|
|
|
@7784
|
8 years |
curtis |
Start window as tall as reasonably possible.
|
|
|
@7783
|
8 years |
curtis |
Expand stretch range.
|
|
|
@7782
|
8 years |
curtis |
First version of Ortho Stack VisBio plugin.
|
|
|
@7781
|
8 years |
paulbarber |
Added GPL license to all source code.
|
|
|
@7780
|
8 years |
aivar |
Tidied up.
|
|
|
@7779
|
8 years |
aivar |
Go back to using Gaussian method to solve and invert matrices.
|
|
|
@7778
|
8 years |
aivar |
Fixed bug in NOISE_MLE case.
|
|
|
@7777
|
8 years |
hinerm |
Fixed append in Windows directory search
Previously was appending ".*" to …
|
|
|
@7776
|
8 years |
hinerm |
Fixed jace-runtime.jar copy path
The previous path to copy …
|
|
|