source: trunk @ 8027

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Diff Rev Age Author Log Message
(edit) @8027   7 years curtis Move LOCI Software projects to Git See:  https://github.com/uw-loci
(edit) @8026   7 years curtis Remove slim-plugin project It has moved to GitHub: …
(edit) @8025   7 years curtis Remove curve-fitter project It has moved to GitHub: …
(edit) @8024   7 years curtis Remove misc-plugins project It has moved to GitHub: …
(edit) @8023   7 years curtis Remove slim-plotter project It has moved to GitHub: …
(edit) @8022   7 years curtis Remove multi-lut from toplevel POM
(edit) @8021   7 years curtis Remove multi-lut project It has moved to GitHub: …
(edit) @8020   7 years aivar SLIM Plugin: Use black for both over and under out of LUT range values.
(edit) @8019   7 years curtis Remove archived OME-XML code There is no need to keep it around at the …
(edit) @8018   7 years curtis Remove POM definitions They have moved to GitHub: …
(edit) @8017   8 years curtis Remove visbio-plugins project It has moved to GitHub: …
(edit) @8016   8 years curtis Remove migrated tar archives
(edit) @8015   8 years curtis Remove visbio project It has moved to GitHub: …
(edit) @8014   8 years curtis Remove flow-cytometry project It has moved to GitHub: …
(edit) @8013   8 years curtis Remove loci-checks project It has moved to GitHub: …
(edit) @8012   8 years curtis Remove jvmlink project It has moved to GitHub: …
(edit) @8011   8 years curtis Remote utils project It has moved to GitHub: …
(edit) @8010   8 years curtis Remove migrated projects from aggregator POM
(edit) @8009   8 years curtis Remove wiscscan-java project It has moved to GitHub: …
(edit) @8008   8 years curtis Remove slim-curve project It has moved to GitHub: …
(edit) @8007   8 years curtis Remove migrated projects from aggregator POM
(edit) @8006   8 years curtis Remove deep-zoom-plugin project It has moved to GitHub: …
(edit) @8005   8 years curtis Remove cppwrap-maven-plugin project It has moved to GitHub: …
(edit) @8004   8 years curtis Remove jar2lib project It has moved to GitHub: …
(edit) @8003   8 years curtis Remove opencl-decon project It has moved to GitHub: …
(edit) @8002   8 years curtis Remove EJBHessianFHT project It has moved to GitHub: …
(edit) @8001   8 years curtis Remove prairie-ome-tiff project It has moved to GitHub: …
(edit) @8000   8 years curtis Remove ForwardCronJob project It has moved to GitHub: …
(edit) @7999   8 years aivar SLIM Plugin: Tidying up. More work on #689, masking.
(edit) @7998   8 years hinerm Corrected Debug/Release path settings The variable specifying …
(edit) @7997   8 years avivekan trial ratio method added
(edit) @7996   8 years aivar SLIM Plugin: Fixes Trac #686 log and linear scales and #687 show photon …
(edit) @7995   8 years avivekan bugfix
(edit) @7994   8 years aivar SLIM Plugin: Clean up code, comments. Worked on masking.
(edit) @7993   8 years aivar SLIM Plugin: Clean up code, comments.
(edit) @7992   8 years aivar SLIM Plugin: Clean up code, comments.
(edit) @7991   8 years curtis Remove obsolete Stitch Prairie TIFFs plugin Fiji's new "Grid/Collection …
(edit) @7990   8 years aivar SLIM Plugin: Trac #700 binning wasn't working. Implemented simple, …
(edit) @7989   8 years aivar SLIM Plugin: Prompts working much better.
(edit) @7988   8 years aivar SLIM Plugin: Tidy up, remove debugging printouts in …
(edit) @7987   8 years aivar SLIM Plugin: #707 The excitation delay field in the UI panel couldn't be …
(edit) @7986   8 years aivar SLIM Plugin: #706 Excitation graph cursors wouldn't update.
(edit) @7985   8 years aivar SLIM Plugin: Fix Jenkins build.
(edit) @7984   8 years avivekan
(edit) @7983   8 years aivar SLIM Plugin: Changed UserInterfacePanel.java from a "m_" member variable …
(edit) @7982   8 years aivar SLIM Plugin: #683 Confused whether there is a prompt. Doing a fit would …
(edit) @7981   8 years avivekan reverted bad code
(edit) @7980   8 years avivekan changed byte[] to short[] and ByteProcessor to ShortProcessor…
(edit) @7979   8 years aivar SLIM Plugin: #704 Histogram Tool UI panel doesn't always update min/max …
(edit) @7978   8 years aivar SLIM Plugin: #703 Got out of index exception drawing JFreeChart decay …
(edit) @7977   8 years aivar SLIM Plugin: #683 Plugin confused whether there is a prompt. Would get …
(edit) @7976   8 years aivar SLIM Plugin: #683 Plugin confused whether there is a prompt. Would get …
(edit) @7975   8 years aivar SLIM Plugin: Further work on masking.
(edit) @7974   8 years aivar SLIM Plugin: Further work on masking.
(edit) @7973   8 years avivekan
(edit) @7972   8 years avivekan going crazy with modifications...2 new methods created in …
(edit) @7971   8 years avivekan major plugin update
(edit) @7970   8 years aivar SLIM Plugin: Added option for colorized grayscale images. Trac #702. …
(edit) @7969   8 years aivar SLIM Plugin: Tidied up estimation code in the Curve Fitter project.
(edit) @7968   8 years aivar SLIM Plugin: Tidied up estimation code in the Curve Fitter project.
(edit) @7967   8 years aivar SLIM Plugin: Tidied up estimation code in the Curve Fitter project.
(edit) @7966   8 years aivar SLIM Plugin: Tidied up estimation code in the Curve Fitter project.
(edit) @7965   8 years aivar SLIM Plugin: Tidied up estimation code in the Curve Fitter project.
(edit) @7964   8 years avivekan somewhat working flow...ratio still too slow
(edit) @7963   8 years aivar SLIM Plugin: Refactor to allow different flavors of fitted images besides …
(edit) @7962   8 years aivar SLIM Plugin: Masking UI. Trac #689 #690.
(edit) @7961   8 years aivar SLIM Plugin: Masking infrastructure. Trac #689 #690.
(edit) @7960   8 years aivar SLIM Plugin: Comment added.
(edit) @7959   8 years aivar SLIM Plugin: Combined two sets of mask code.
(edit) @7958   8 years aivar SLIM Plugin: Mask class to define and share masks for fitted images.
(edit) @7957   8 years aivar SLIM Plugin: Documentation tweak.
(edit) @7956   8 years aivar SLIM Plugin: Checks for fitting images closing.
(edit) @7955   8 years avivekan changes to plugin, and new flowcyto class created with only the methods …
(edit) @7954   8 years aivar See Trac ticket #696. Simple typo was causing the RLD fit estimate to …
(edit) @7953   8 years aivar SLIM Curve: Look for project version instead of hardcoded "1.0-SNAPSHOT" …
(edit) @7952   8 years aivar SLIM Curve: Added explicit version instead of inheriting from parent. …
(edit) @7951   8 years aivar SLIM Curve: Changed parent POM from 1.0-SNAPSHOT to 1.0.
(edit) @7950   8 years aivar SLIM Plugin: Trac #695 Problem finding LUT when running from a shortcut.
(edit) @7949   8 years curtis Update cppwrap to latest SNAPSHOT version
(edit) @7948   8 years curtis Remove unnecessary cppwrap plugin reference
(edit) @7947   8 years curtis Revert to snapshot numbering for LOCI parent POM This is temporarily …
(edit) @7946   8 years curtis Update cppwrap-maven-plugin to next SNAPSHOT
(edit) @7945   8 years curtis Release version 1.0.0 of cppwrap-maven-plugin
(edit) @7944   8 years curtis Update jar2lib to next SNAPSHOT version
(edit) @7943   8 years curtis Update projects to use release version of parent Projects are now …
(edit) @7942   8 years curtis Use release version numbering for LOCI parent POM This makes it easier to …
(edit) @7941   8 years curtis Update to latest SciJava POM
(edit) @7940   8 years aivar SLIM Plugin: Now plugin is under "Analyze"/"Lifetime"/"Spectral Lifetime …
(edit) @7939   8 years aivar SLIM Plugin: Moved plugin from it's own "Lifetime" category to existing …
(edit) @7938   8 years aivar SLIM Plugin: Moved plugin from it's own "Lifetime" category to existing …
(edit) @7937   8 years aivar SLIM Plugin: New "FitterEstimator" class was missing when fitting images; …
(edit) @7936   8 years aivar SLIM Plugin: Working on cursor problems.
(edit) @7935   8 years aivar SLIM Plugin: Working on cursor problems.
(edit) @7934   8 years curtis Fix JDK6 compile errors Switching on Strings only works with JDK7+.
(edit) @7933   8 years aivar SLIM Plugin: Ticket #681: Missing lifetime LUT crashes the plugin; display …
(edit) @7932   8 years avivekan refactoring (1 of many to come)
(edit) @7931   8 years aivar SLIM Plugin: Tidied up some very hacky code that called the native library …
(edit) @7930   8 years aivar SLIM Plugin: Transient cursors not applied properly. Part of Ticket #678. …
(edit) @7929   8 years aivar SLIM Plugin: Transient cursors not applied properly. Part of Ticket #678.
(edit) @7928   8 years kbriney Populate structured annotations in injected XML with original Prairie …
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