Timeline


and

07/19/06:

20:32 Changeset [1182] by chris
MetadataPane: 1) made "new" documents based on the template work …
14:48 Changeset [1181] by curtis
Update utilities to function with latest Bio-Formats API; remove obsolete …
13:41 Changeset [1180] by curtis
Append file name to window title bars.

07/18/06:

19:57 Changeset [1179] by chris
ClickableTable: 1) added support for deleting a particular attribute …
17:22 Changeset [1178] by curtis
Whitespace.
15:29 Changeset [1177] by curtis
Use curve manipulation renderer to allow freehand ROI selection; use …
14:28 Changeset [1176] by curtis
Remove XML parsing hack, since it is no longer necessary.

07/17/06:

18:37 Changeset [1175] by chris
ClickableTable: 1) created this file, allows the table to be right-clicked …
17:49 Changeset [1174] by curtis
Ignore *.jar files.
17:48 Changeset [1173] by curtis
Add support for skew correction (alignment of peaks); miscellaneous …
17:48 Changeset [1172] by curtis
Make build script work with split SVN/CVS folders.

07/14/06:

19:05 Changeset [1171] by chris
MetadataPane: 1) just added more comments, think that's it …
17:48 Changeset [1170] by chris
no changes here
17:41 Changeset [1169] by chris
just added the necessary template files to the cvs director
17:16 Changeset [1168] by curtis
Whitespace.
17:10 Changeset [1167] by curtis
Whitespace.
16:52 Changeset [1166] by curtis
Ignore *.class.
16:50 Changeset [1165] by curtis
Eliminate jikes warnings.
16:48 Changeset [1164] by curtis
Eliminate jikes warnings.
16:31 Changeset [1163] by chris
TemplateParser: 1) added method getRefHash() to get parse of symantic def …
16:22 Changeset [1162] by francis
- Now uses Bioformats exclusively. Also works with virtual stack. - to do: …
15:58 Changeset [1161] by curtis
Add "-omexml" option to FormatReader.testRead (inf and showinf scripts) to …
15:44 Changeset [1160] by curtis
Ignore *.class.
15:41 Changeset [1159] by curtis
Ignore *.class.
15:28 Changeset [1158] by curtis
Ignore *.class files.
15:28 Changeset [1157] by curtis
Remove most reflection code. Compiles, but is currently totally broken.
15:25 Changeset [1156] by curtis
Whitespace.
15:10 Changeset [1155] by curtis
Fix inconsistency in setLogicalChannel method implementations.

07/13/06:

06:27 Changeset [1154] by brian
Fixes to a number of files previously submitted: * setMetadataStore() …

07/12/06:

18:36 Changeset [1153] by chris
TemplateParser: 1) okay so now the hashtable of referenced element types …
18:30 Changeset [1152] by chris
TemplateParser: 1) added support to create a hashtable that designates …
16:11 Changeset [1151] by curtis
Use 80, not 79, for maximum line length.
15:41 Changeset [1150] by curtis
Add commented out code to enable curved manipulation renderer …
15:38 Changeset [1149] by curtis
Changes needed for relocation of Bio-Formats readers and writers, and …
14:59 Changeset [1148] by chris
Added to Notebook: 1) changes in method that handles the tabs menu changes …
14:09 Changeset [1147] by melissa
bugfixes in LIFReader
14:09 Changeset [1146] by melissa
bugfixes in FormatReader.testRead
13:48 Changeset [1145] by curtis
Put plugins in LOCI subfolder.
09:40 Changeset [1144] by melissa
fixed SizeC in Openlab LIFF

07/11/06:

17:24 Changeset [1143] by curtis
Change old getChannelCount to new getSizeC.
16:50 Changeset [1142] by curtis
Switch itemNames back to Vector, since ZVI reader needs it that way.
16:44 Changeset [1141] by curtis
Whitespace.
15:26 Changeset [1140] by curtis
Use HashSets wherever possible, but not in places that break things.
15:11 Changeset [1139] by melissa
style fix in ChannelMerger
15:06 Changeset [1138] by melissa
moved file stitching logic to separate class
14:54 Changeset [1137] by curtis
Use HashSets instead of Vectors, for efficiency.
13:37 Changeset [1136] by curtis
Some improvements to the testRead method: * Readd support for -stitch …
13:34 Changeset [1135] by curtis
Fix bug in getSizeZ.
12:11 Changeset [1134] by melissa
* added getSizeX(String), getSizeY(String), getSizeZ(String), …

07/10/06:

18:46 Changeset [1133] by chris
added: 1) just made the combo box setEditor actually edit the OMEXMLNode …
16:46 Changeset [1132] by curtis
Support multiple Bio-Formats packages; add Chris Allan to Bio-Formats …
16:42 Changeset [1131] by curtis
Whitespace.
16:21 Changeset [1130] by chris
added: 1) goto buttons work for changing tabs appropriately now, although …
16:21 Changeset [1129] by curtis
Remove obsolete plugin configuration file.
16:20 Changeset [1128] by curtis
Remove obsolete plugins configuration file.
15:41 Changeset [1127] by curtis
Whitespace.
13:50 Changeset [1126] by curtis
Remove FilePattern classes (use loci.util.FilePattern instead).
13:50 Changeset [1125] by curtis
Tab removal.
13:35 Changeset [1124] by curtis
Standardize copyrights and add Chris Allan to list of authors.
13:15 Changeset [1123] by curtis
Move BZip library to loci.formats.in package.
13:13 Changeset [1122] by curtis
Move RedBlackTree to loci.formats.in package.
13:04 Changeset [1121] by curtis
Move readers to loci.formats.in package, and writers to loci.formats.out.
11:29 Changeset [1120] by callan
Re-work of OMETools to use the MetadataStore API …

07/07/06:

18:14 Changeset [1119] by chris
added: (1) support for reading attributes from the xml file and displaying …
17:48 Changeset [1118] by francis
- LociDataBrowser now uses BioFormat. Needs to be optimized later.
14:44 Changeset [1117] by curtis
Add option to toggle file stitching when test reading images.
14:08 Changeset [1116] by francis
* empty log message *
12:34 Changeset [1115] by melissa
bugfixes
11:51 Changeset [1114] by melissa
OIB partially fixed - still throws StackOverflowError when using the …
11:16 Changeset [1113] by melissa
bugfixes
08:46 Changeset [1112] by melissa
file stitching and channel merging should work now

07/06/06:

13:35 Changeset [1111] by curtis
Add fix for data/quicktime/haining/video2.mov to the list.
10:05 Changeset [1110] by melissa
fixed bugs in ChannelMerger; file stitching is now a little more efficient

07/05/06:

14:04 Changeset [1109] by melissa
removed debug statements
13:43 Changeset [1108] by melissa
fixed ChannelMerger
13:37 Changeset [1107] by melissa
temporarily removed calls to ChannelMerger
13:05 Changeset [1106] by melissa
made ChannelMerger more efficient
11:27 Changeset [1105] by melissa
changed FormatReader.testRead to use new channel merging logic
11:00 Changeset [1104] by melissa
added ChannelMerger
10:59 Changeset [1103] by melissa
- added logic to automatically merge channels if separated == false - …
08:58 Changeset [1102] by callan
Updates to Deltavision reader on Brian's <brain@…> …

07/03/06:

17:07 Changeset [1101] by francis
- added a progress bar. - added (primitive) asynchronous loading of …
11:21 Changeset [1100] by melissa
fixed LSM reader to allow opening of corrupt files
10:57 Changeset [1099] by melissa
fixed TiffTools to handle data/zeiss-lsm/billm/*

06/30/06:

18:58 Changeset [1098] by chris
first time committed so not much to say: have some horrible bug in that …
12:43 Changeset [1097] by melissa
bugfix in TiffTools
10:54 Changeset [1096] by melissa
moved file stitching logic from ImageReader to FormatReader
01:10 Changeset [1095] by curtis
Fix typos in output.
01:00 Changeset [1094] by curtis
Avoid NullPointerExceptions when doing directory listings; output more …

06/29/06:

12:17 Changeset [1093] by melissa
corrected SizeZ/C/T and DimensionOrder values in some readers
11:12 Changeset [1092] by melissa
corrected SizeZ/C/T and DimensionOrder values in some readers

06/28/06:

16:07 Changeset [1091] by curtis
Reorganize plugin build scripts into one master plugin.
14:48 Changeset [1090] by melissa
corrected SizeC in BaseTiffReader
14:16 Changeset [1089] by curtis
Add BaseTiffReader to list of required classes.
11:10 Changeset [1088] by chris
Initial version of Metadata Notebook.

06/27/06:

15:10 Changeset [1087] by melissa
fixed small bug in QTWriter
15:09 Changeset [1086] by melissa
fixed small bug in TiffWriter
12:53 Changeset [1085] by melissa
removed LociExporter stuff from todo list
12:28 Changeset [1084] by melissa
added HandleExtraFileTypes
12:14 Changeset [1083] by melissa
expanded FormatWriter API to allow clients to specify a compression type; …
08:08 Changeset [1082] by melissa
* updated import/export plugins to allow merging and splitting of channels …

06/23/06:

08:45 Changeset [1081] by melissa
added ImageJ-related items to the todo list

06/22/06:

14:01 Changeset [1080] by curtis
Add support for reading QuickTime movies with QTJava. Special case for …

06/21/06:

17:16 Changeset [1079] by curtis
Don't prepend jre\bin to java executable.
17:14 Changeset [1078] by curtis
Add option to use QTJava (on by default, if possible).
16:51 Changeset [1077] by curtis
Add specs folder to list of SDT resources.
13:58 Changeset [1076] by melissa
Removed ImageJ plugin from the list.
11:12 Changeset [1075] by melissa
removed annoying debug statement

06/20/06:

15:03 Changeset [1074] by melissa
fixed uploading/downloading...again
08:42 Changeset [1073] by melissa
check length of pixel arrays in LociImporter to prevent annoying …
08:21 Changeset [1072] by melissa
fixed ZVI reader to work with files in data/zeiss-zvi/dietmar

06/19/06:

17:09 Changeset [1071] by curtis
Import all necessary classes (but writer is still broken).
17:08 Changeset [1070] by curtis
Better exceptions when classes are not found.
12:22 Changeset [1069] by curtis
Remove debugging rainbow around arbitrary slice.
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