Timeline
08/30/07:
- 16:40 Ticket #171 (Improve OME-TIFF grouping logic) created by
- Right now, the OME-TIFF reader relies on filename stitching with …
- 15:58 Ticket #170 (Investigate ImageJ's VirtualStack objects) created by
- ImageJ now has a [ http://rsb.info.nih.gov/ij/source/ij/VirtualStack.java …
- 15:11 Changeset [3124] by
- * Preserve existing codec if none has been set using the IFormatWriter …
- 15:07 Ticket #169 (LegacyQTWriter cannot save using Motion JPEG-B codec) created by
- When attempting to save using the Motion JPEG-B codec, there is a failure …
- 15:00 Ticket #168 (LegacyQTWriter is broken) created by
- Using ImageJ to save to a codec other than Uncompressed or Animation …
- 14:03 Ticket #167 (Motion JPEG-B support for single-image QuickTime movies is broken) created by
- When attempting to read the single-frame QuickTime movies compressed with …
- 13:50 Ticket #166 (LegacyQTReader is broken) created by
- When reading any QuickTime file with a codec that requires QTJava, an …
- 12:31 Changeset [3123] by
- Commented out Motion JPEG-B codec.
- 11:55 Changeset [3122] by
- A simple utility to filter out duplicate stack traces.
- 10:38 Changeset [3121] by
- Fix compile errors.
08/29/07:
- 08:16 Changeset [3120] by
- Miscellaneous bugfixes.
08/28/07:
- 16:49 Ticket #165 (Another arbitrary slicing NullPointerException) closed by
- fixed: Fixed in r3119 (updating to the latest VisAD made the problem disappear).
- 16:48 Changeset [3119] by
- Latest VisAD library.
- 16:42 Ticket #165 (Another arbitrary slicing NullPointerException) created by
- When attempting to slice the dub dataset: […]
- 16:36 Changeset [3118] by
- Initial skeleton for Bio-Formats Metadata Guide.
- 12:17 Changeset [3117] by
- Add link to online Javadocs.
- 12:00 Changeset [3116] by
- Remove unused MetadataStoreException.
- 11:51 Changeset [3115] by
- Add DummyMetadata as default metadata retrieval object. Throw …
- 11:49 Changeset [3114] by
- Rename DummyMetadataStore to DummyMetadata, and implement …
- 08:57 Changeset [3113] by
- Fixed offset calculation heuristic.
- 08:31 Changeset [3112] by
- Remove unnecessary createRoot calls.
- 08:26 Changeset [3111] by
- Fix more compile errors.
- 08:23 Changeset [3110] by
- Fix more compile errors.
08/27/07:
- 21:44 Changeset [3109] by
- Fixed compile errors.
- 21:35 Changeset [3108] by
- 1. Cleaned up MetadataStore and MetadataRetrieve interface usage: * …
- 15:11 Changeset [3107] by
- Added support for zlib-compressed pixel data.
- 10:28 Changeset [3106] by
- Clean up isThisType(String, boolean) methods a little bit more.
- 10:12 Changeset [3105] by
- Add notes on loci.formats.ome dependencies; comment out some code.
- 10:03 Changeset [3104] by
- A bunch of miscellaneous bugfixes and tweaks: * Remove some faulty …
08/24/07:
- 15:18 Changeset [3103] by
- Fix up spreadsheet process launcher -- but still broken on Mac OS X.
- 15:05 Changeset [3102] by
- Add hack to work around another WiscScan bug.
- 14:19 Changeset [3101] by
- Use exception chaining to preserve root causes of exceptions.
08/23/07:
- 14:32 Changeset [3100] by
- Better error messages in the exporter.
- 14:31 Changeset [3099] by
- Added missing import.
- 11:51 Changeset [3098] by
- Fixed how metadata is split between series.
08/22/07:
- 13:58 Changeset [3097] by
- Whitespace.
- 13:57 Changeset [3096] by
- Fix bug in buffer allocation.
- 13:56 Changeset [3095] by
- Remove .2, .3 and .4 from valid extensions list.
- 12:04 Changeset [3094] by
- Fixed bug reported by Venu Kesireddy.
- 10:13 Changeset [3093] by
- Fixed Z/T size bug.
08/20/07:
- 10:51 Changeset [3092] by
- Fixed to work with omebf.
- 08:53 Changeset [3091] by
- Fixed how custom LUTs are handled in Leica LEI files.
08/15/07:
- 22:35 Changeset [3090] by
- Fix XML error with javadoc element.
08/14/07:
- 14:21 Changeset [3089] by
- Do not include deprecated methods in Javadoc.
- 12:29 Changeset [3088] by
- Fix the series name fix.
- 12:13 Changeset [3087] by
- More verbose error reporting.
- 11:41 Changeset [3086] by
- Initial skeleton for Bio-Formats ImageJ macro extensions. Several key …
- 11:40 Changeset [3085] by
- Tweak.
- 11:40 Changeset [3084] by
- Add Melissa as an author.
- 11:40 Changeset [3083] by
- Move file grouping constants into format reader interface.
- 11:38 Changeset [3082] by
- Fix bug Christophe Leterrier found with missing series names.
- 11:08 Ticket #164 (Emissions spectrum view in 2D pane) created by
- An emission spectrum view in 2D would be a useful addition to Slim …
08/10/07:
- 16:17 Changeset [3081] by
- Minor UI tweaks.
- 16:09 Changeset [3080] by
- Fix problem with getZCTCoords and getIndex for YX dimension orders.
- 16:05 Changeset [3079] by
- Add option to override dimension order (tests DimensionSwapper class).
- 16:05 Changeset [3078] by
- * Fix bug in dimension swapper with incorrect OME-XML Pixels population. …
- 15:33 Changeset [3077] by
- Reorganize display controls to be tabbed instead of sprawling. This will …
- 14:11 Changeset [3076] by
- Fixed to work with omebf.
- 11:50 Ticket #38 (Arbitrary slicing does not work for large data) closed by
- fixed: Fixed in r3075.
- 11:48 Changeset [3075] by
- Fix arbitrary slicing efficiency bug.
- 11:14 Changeset [3074] by
- Preserve user-specified file ordering.
- 11:12 Changeset [3073] by
- Fixed Prairie and ICS readers to work with omebf.
08/09/07:
- 16:14 Changeset [3072] by
- Fix typo.
- 15:24 Changeset [3071] by
- Minor tweaks.
- 14:52 Ticket #160 (Clean up overlays tutorial) closed by
- fixed: Fixed in r3069. And r3070 adds Abe to the copyright.
- 14:51 Changeset [3070] by
- Update copyright notice to include Abe.
- 14:41 Changeset [3069] by
- Clean up tutorial a little.
- 14:29 Changeset [3068] by
- * Include PNGs for overlays tutorial in VisBio resources. * Remove …
- 14:22 Ticket #150 (Assorted peculiar VisBio exceptions) closed by
- worksforme: I could not duplicate the TransformLink NullPointerException. Even if a …
- 14:17 Ticket #161 (Make volume rendering checkbox friendlier to use) closed by
- fixed: Done in r3067.
- 14:16 Changeset [3067] by
- Guess at good default opacity settings when volume rendering is first …
- 14:04 Changeset [3066] by
- Disable save check until state logic can be thoroughly fixed.
- 13:56 Ticket #66 (Set default overlays filename) closed by
- fixed: Fixed in r3065.
- 13:55 Changeset [3065] by
- Use reasonable default name when saving or exporting overlay data.
- 13:42 Ticket #36 (4-channel data does not import correctly) closed by
- fixed: Fixed in r3064.
- 13:41 Changeset [3064] by
- Allow 4 range components in ImageFlatField.
- 13:32 Ticket #115 (Arbitrary slicing can throw NullPointerException) closed by
- fixed: Fixed in r3056.
- 11:44 Changeset [3063] by
- Refix initial skeleton schemaLocation attribute.
- 10:55 Changeset [3062] by
- Only report no errors if, in fact, there were no errors.
- 10:52 Changeset [3061] by
- Output all XML validation errors, not just the first.
08/08/07:
- 14:44 Changeset [3060] by
- Set the file name as the default image name.
- 08:55 Changeset [3059] by
- Removed plane flipping logic.
08/07/07:
- 14:30 Changeset [3058] by
- Workaround for NullPointerException.
- 14:29 Changeset [3057] by
- Add option to toggle stereo displays on or off.
- 14:20 Changeset [3056] by
- Fix stupid dimensional position bug.
- 13:44 Changeset [3055] by
- Fix compile error.
- 13:36 Changeset [3054] by
- Several bugfixes to ImprovisionTiffReader.isThisType.
- 13:22 Changeset [3053] by
- Fix color reset bug when adding transforms to a display. Temporary fix; …
08/06/07:
- 16:33 Changeset [3052] by
- Fix problem with OME-XML validation on Linux.
- 16:30 Changeset [3051] by
- Add option to brute force past accessibility restrictions.
- 15:53 Changeset [3050] by
- Better Javadoc.
- 15:50 Changeset [3049] by
- Some improvements to reflected universe functionality: * direct variable …
- 14:11 Changeset [3048] by
- More optimizations for ND2 initialization step.
- 10:58 Changeset [3047] by
- Remove invalid metadata.
- 08:58 Changeset [3046] by
- Removed some unused variables.
- 08:03 Changeset [3045] by
- More efficient initialization of uncompressed files.
08/03/07:
- 19:47 Changeset [3044] by
- Return 1 for default pixel/domain multiplier.
- 19:45 Changeset [3043] by
- Validate against OME-XML, not OMECA-XML.
- 19:29 Changeset [3042] by
- * Use an internal ID generation mechanism that produces valid IDs. * Fix …
- 16:36 Changeset [3041] by
- Add OME-XML validation to showinf.
- 15:02 Changeset [3040] by
- Add a hack to filter out stupid clipboard stack traces on Mac OS X.
- 14:44 Changeset [3039] by
- Better pixel type/channel detection.
- 10:48 Changeset [3038] by
- Gracefully handle case where clipboard contents are unavailable (except on …
- 09:16 Changeset [3037] by
- 32-bit uncompressed data is now interpreted as 4 channels, 8 bits per …
08/02/07:
- 13:25 Changeset [3036] by
- Fixed bug with multi-channel files that aren't RGB.
- 12:44 Changeset [3035] by
- Remove garbage data from channel name.
- 12:15 Changeset [3034] by
- Fixed bug with Fluoview files that have sizeY == 1.
08/01/07:
- 16:51 Ticket #163 (Expand VisBio as a toolkit with scriptable components) created by
- VisBio already has some connectivity with ImageJ, and with MATLAB, but …
- 16:38 Ticket #162 (GUI usability improvements) created by
- For the v3.5 release, some GUI panels should be consolidated or moved …
- 16:23 Ticket #161 (Make volume rendering checkbox friendlier to use) created by
- When checking the "Render as a volume" checkbox, nothing is done to the …
- 16:21 Ticket #160 (Clean up overlays tutorial) created by
- Abe wrote a really nice tutorial for doing overlays in VisBio, but I do …
- 16:08 Ticket #13 (Behavior of overlay tools when no data object present) closed by
- fixed: To generate the exception mentioned in the previous comment, overlays must …
- 13:08 Changeset [3033] by
- Fixed to work with Java 1.4
- 11:31 Changeset [3032] by
- * Clean up overlay GUI controls a little. * Fix bug with text field not …
- 10:43 Changeset [3031] by
- 2007 Aug 01 release of LOCI Tools
- 10:43 Changeset [3030] by
- 2007 Aug 01 release of LOCI Tools
- 10:43 Changeset [3029] by
- 2007 Aug 01 release of LOCI Tools
- 10:43 Changeset [3028] by
- 2007 Aug 01 release of LOCI Tools
- 10:43 Changeset [3027] by
- 2007 Aug 01 release of LOCI Tools
- 10:43 Changeset [3026] by
- 2007 Aug 01 release of LOCI Tools
- 10:43 Changeset [3025] by
- 2007 Aug 01 release of LOCI Tools
- 10:43 Changeset [3024] by
- 2007 Aug 01 release of LOCI Tools
- 10:31 Changeset [3023] by
- Updated MetadataStore.setLogicalChannel to be more complete; updated …
- 10:26 Changeset [3022] by
- Bugfixes.
07/31/07:
- 18:34 Changeset [3021] by
- Previous ome-java.jar didn't strip invalid characters out of the XML …
- 10:03 Changeset [3020] by
- Fixed dimension order bug.
Note: See TracTimeline
for information about the timeline view.
