Timeline


and

01/06/09:

19:04 Changeset [4734] by curtis
Fix dependencies for editor, notes and ijview command line tools.
16:59 Changeset [4733] by curtis
More robust parsing of command line flags.
14:07 Changeset [4732] by melissa
Moved EditTiffG to loci.formats.tools and added an option to tiffcomment …
13:58 Ticket #343 (Fix OME-XML population bugs in FV1000 reader) closed by melissa
fixed: Fixed wavelengths in r4731. The Laser Wavelength value was correct, but …
13:15 Changeset [4731] by melissa
Minor metadata updates.
10:50 Ticket #337 (Consider expanding "Colorize Channels" option) closed by melissa
fixed: (In [4730]) Added option to specify which colors are used when colorizing; …
10:50 Changeset [4730] by melissa
Added option to specify which colors are used when colorizing; closes …

01/05/09:

14:13 Changeset [4729] by melissa
Several additions to the MetadataStore API, including the new ROI model …

01/02/09:

10:38 Changeset [4728] by melissa
Added majority of upgrade checking functionality (see #327). Does not yet …

12/31/08:

19:21 Ticket #343 (Fix OME-XML population bugs in FV1000 reader) created by melissa
The following fields are being populated incorrectly: * LogicalChannel …
18:16 Ticket #342 (Add support for reading/writing multi-page EPS files) created by melissa
Bio-Formats currently cannot read or write multi-page EPS files. Since …
18:11 Ticket #341 (Add unit tests for writers) created by melissa
We have lots of TestNG tests for the readers, but none that exercise the …
15:19 Ticket #334 (Parse instrument metadata from MicroManager files) closed by melissa
fixed: (In [4727]) Improved OME-XML population for MicroManager; closes #334.
15:18 Changeset [4727] by melissa
Improved OME-XML population for MicroManager; closes #334.
13:50 Changeset [4726] by melissa
Parse the XML comment from TIFF files that are part of a Metamorph .nd …

12/30/08:

12:01 Ticket #340 (Metadata completeness - Leica LEI/LIF) created by melissa
Go through Leica sample files and make sure that as much metadata as …
12:00 Ticket #339 (Metadata completeness - Metamorph STK) created by melissa
Go through Metamorph STK, TIFF and .nd sample files and make sure that as …
11:59 Ticket #338 (Metadata completeness - Nikon ND2) created by melissa
Go through Nikon ND2 sample files and make sure that as much metadata as …
08:45 Ticket #337 (Consider expanding "Colorize Channels" option) created by melissa
Currently, the "Colorize Channels" option assumes that the first channel …

12/29/08:

13:48 Changeset [4725] by melissa
2008 Dec 29 release of LOCI Tools
13:43 Changeset [4724] by melissa
2008 Dec 29 release of LOCI Tools
13:43 Changeset [4723] by melissa
2008 Dec 29 release of LOCI Tools
13:43 Changeset [4722] by melissa
2008 Dec 29 release of LOCI Tools
13:43 Changeset [4721] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4720] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4719] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4718] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4717] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4716] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4715] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4714] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4713] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4712] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4711] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4710] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4709] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4708] by melissa
2008 Dec 29 release of LOCI Tools
13:42 Changeset [4707] by melissa
2008 Dec 29 release of LOCI Tools
12:08 Changeset [4706] by melissa
Updated what's new for today's release.
11:44 Changeset [4705] by melissa
Fixed various conversion bugs.

12/23/08:

14:10 Ticket #336 (Add support for MPEG-2/.vob files) created by melissa
We should consider adding support for MPEG-2 video (on which .vob files …
10:54 Changeset [4704] by curtis
Tweak JRE runtime location.
10:52 Changeset [4703] by melissa
Fixed minor metadata parsing bugs.
10:16 Ticket #335 (Fix AVIs produced by OpenBox) closed by melissa
fixed: (In [4702]) Fix for 16-bit grayscale AVIs; closes #335.
10:16 Changeset [4702] by melissa
Fix for 16-bit grayscale AVIs; closes #335.

12/22/08:

13:21 Ticket #335 (Fix AVIs produced by OpenBox) created by melissa
AVIs produced by OpenBox are read incorrectly by Bio-Formats; they should …
13:19 Ticket #334 (Parse instrument metadata from MicroManager files) created by melissa
Some MicroManager datasets (e.g. S2-GFP-Histone-Cherry-tub_9_Great2) …

12/18/08:

17:45 Changeset [4701] by curtis
Remove redundant -fPIC flag.
17:24 Changeset [4700] by curtis
Link JVM library properly, and add a couple stock Jace examples.

12/16/08:

12:17 Changeset [4699] by curtis
Fix some problems with the build script. Still doesn't work 100% though.
11:07 Changeset [4698] by melissa
Link Image and Instrument in MicroManager datasets.

12/15/08:

12:02 Ticket #333 (Decide how to handle XZ and XT scans) created by melissa
Many formats support XZ and XT scans (i.e. Y axis has length 1). Some …

12/14/08:

11:22 Changeset [4697] by curtis
* Improve chi2 error only for selected region, if any. * Fix units for …

12/12/08:

16:48 Changeset [4696] by curtis
Some initial code for Bio-Formats C++ bindings using Jace. Not yet …

12/11/08:

19:05 Changeset [4695] by gbonamy
Fixed populating the metadata for DimensionsPhysicalSizeX, …
18:54 Changeset [4694] by gbonamy
Modification of formating of the error messages
15:30 Changeset [4693] by curtis
Add macro functions for querying plane timings, and add an example macro.
14:37 Changeset [4692] by melissa
Only apply the rescaling function to signed data.
14:25 Changeset [4691] by melissa
Prevent isThisType from throwing a NPE if the file doesn't have a parent …
14:15 Changeset [4690] by melissa
If the .nd file contains a creation date, use it to populate …
13:45 Changeset [4689] by curtis
Increase javadoc memory to 512MB, and fail on error.
13:15 Changeset [4688] by melissa
Fixed problems with displaying signed data.
10:24 Changeset [4687] by melissa
Fixed bug in plane size detection.

12/10/08:

10:45 Changeset [4686] by melissa
* Fixed SignedColorModel to better handle two-channel data. * Don't pad …
10:42 Changeset [4685] by melissa
Explicitly close the writer.
08:28 Changeset [4684] by melissa
Parse timestamps.

12/09/08:

22:23 Changeset [4683] by melissa
Some improvements to MicroManager metadata support. Still need to parse …
16:13 Changeset [4682] by melissa
* Fixed bug with 16-bit RLE-compressed DICOM files. * Fixed JPEG-2000 …
08:11 Changeset [4681] by melissa
Modified Codec API to be a little more intuitive. The compress and …

12/08/08:

14:52 Changeset [4680] by melissa
Fix for > 4 GB LSM files.
13:05 Changeset [4679] by curtis
A little GUI for testing Java memory behavior.
08:30 Changeset [4678] by melissa
Don't close the stream if it is null.
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