Timeline


and

12/17/09:

13:51 Ticket #407 (Add support for Slidebook spool (.spl) files) closed by melissa
fixed: (In [5748]) Tweaked Slidebook reader to work with spool files. Closes …
13:51 Changeset [5748] by melissa
Tweaked Slidebook reader to work with spool files. Closes #407.
12:00 Ticket #383 (Generated OME-TIFF files have elements in the wrong order) closed by curtis
fixed: This problem was fixed a while ago in r5467. It uses a stylesheet (thanks …
09:15 Changeset [5747] by melissa
One more exposure time parsing fix.
08:50 Changeset [5746] by melissa
Fixed bug in exposure time parsing, thanks to Simon Blanchoud.

12/16/09:

15:07 Changeset [5745] by melissa
Allow file grouping across multiple directories.
09:43 Changeset [5744] by melissa
Swapped plate naming conventions for plates with > 26 rows and added spot …

12/15/09:

15:36 Ticket #433 (Consider adding getBitsPerPixel() to IFormatReader) closed by melissa
fixed: (In [5743]) Added 'getBitsPerPixel()' to IFormatReader. Closes #433.
15:36 Changeset [5743] by melissa
Added 'getBitsPerPixel()' to IFormatReader. Closes #433.
14:57 Changeset [5742] by curtis
Eliminate needless complexity.
13:54 Changeset [5741] by curtis
Fix ND2 padding issue for images with odd widths.
08:59 Changeset [5740] by melissa
Added Ant target to create a Zip file containing the Javadocs.

12/14/09:

15:09 Changeset [5739] by curtis
More minor build tweaks.
15:04 Changeset [5738] by curtis
Fix problem with newlines.
14:58 Changeset [5737] by curtis
Better SVN info (and should work without svn command line tool as well).
11:55 Changeset [5736] by melissa
A few more tiling fixes.

12/13/09:

21:05 Ticket #443 (Add support for IN Cell 3000 datasets) created by curtis
Bio-Formats currently supports IN Cell 1000, but we would also like to …

12/11/09:

12:47 Changeset [5735] by melissa
Convert signed data to unsigned data before writing PNG images.
09:38 Changeset [5734] by melissa
Fixed AIOOB and a few OME-XML validation problems.

12/10/09:

00:33 Changeset [5733] by curtis
Fix a problem with source tree paths containing spaces.

12/08/09:

20:00 Ticket #436 (Improve ND2 initialization time) closed by curtis
fixed: Fixed in r5732.
00:14 Changeset [5732] by curtis
Major speed-up to initialization for new-style ND2 files.
00:14 Changeset [5731] by curtis
Fix a bug where DelegateReader did not propagate StatusListeners.

12/07/09:

23:34 Changeset [5730] by melissa
Ignore image chunks that have a length of 0.

12/03/09:

13:35 Ticket #440 (Add option to disable file grouping) closed by melissa
fixed: (In [5729]) * Added option to disable file grouping in ImageJ plugin. …
13:35 Changeset [5729] by melissa
* Added option to disable file grouping in ImageJ plugin. Closes #440. * …
10:54 Changeset [5728] by melissa
4.1.1 release of LOCI Tools
09:24 Changeset [5727] by melissa
Updated documentation and what's new for today's release.
03:03 Changeset [5726] by curtis
Some tweaks to the Bio-Formats ITK plugin.

12/02/09:

11:15 Changeset [5725] by curtis
Generalize 64-bit JVM detection for QTJava (also a problem with Win64).

12/01/09:

10:34 Changeset [5724] by curtis
Initial Ant build file for bf-itk.
10:14 Changeset [5723] by curtis
Avoid invalid memory access error on some systems.

11/26/09:

08:59 Changeset [5722] by curtis
Attach metadata store for more involved parallel metadata parsing.
08:56 Changeset [5721] by curtis
Test class for reading from many files in parallel.

11/25/09:

16:12 Changeset [5720] by melissa
* Added a bunch of status messages to FlexReader. * Tweaked …
14:01 Ticket #442 (Feedback 2117: color on change on re-import) closed by melissa
invalid: This is not a bug in Bio-Formats, but rather a problem with OMERO's …
06:26 Ticket #442 (Feedback 2117: color on change on re-import) created by omero-qa
 http://qa.openmicroscopy.org.uk/qa/feedback/2117/
05:13 Ticket #441 (Feedback 2110 : File handle error on MIAS plate) created by omero-qa
 http://qa.openmicroscopy.org.uk/qa/feedback/2110/

11/24/09:

14:02 Ticket #427 (Add support for Imacon (.fff) files) closed by melissa
fixed: (In [5719]) Added preliminary support for Imacon 3F data. Closes #427.
14:02 Changeset [5719] by melissa
Added preliminary support for Imacon 3F data. Closes #427.

11/23/09:

15:49 Changeset [5718] by curtis
Fixes for compiling Bio-Formats ITK plugin on Windows.
15:06 Changeset [5717] by melissa
Merged r5714 into 4.1 branch.
14:50 Changeset [5716] by melissa
* Updated metadata support documentation. * Updated branch version number …
14:29 Changeset [5715] by melissa
Added 'domainlist' command for printing a list of supported domains.
13:10 Changeset [5714] by curtis
Update EditImageName example to use IMetadata interface.
12:46 Ticket #440 (Add option to disable file grouping) created by melissa
The IFormatReader API allows grouping to be disabled for multi-file …
07:47 Changeset [5713] by melissa
Fixed AIOOB.

11/22/09:

11:56 Changeset [5712] by melissa
* Merged r5706, r5636, and r5654 into 4.1 branch. * Fixed SizeC mismatch …
11:27 Changeset [5711] by melissa
Bug fixes.

11/20/09:

09:26 Changeset [5710] by curtis
Fix bug with ZCT mapping. Without this fix, Bio-Formats has a ZCT mismatch …
08:07 Ticket #439 (Add support for HDF files produced by Huygens) created by melissa
See data and notes in data/svi-hdf/samples/.

11/19/09:

16:51 Ticket #438 (Allow readers to report whether or not companion files can be expected) created by melissa
i.e. add something like 'public static boolean hasCompanionFiles()' to …
16:13 Ticket #434 (Feedback 1528: OOM in ZVI) closed by melissa
fixed: (In [5709]) * Various bug fixes. * Reduced amount of memory required by …
16:13 Changeset [5709] by melissa
* Various bug fixes. * Reduced amount of memory required by ZeissZVIReader …
16:02 Changeset [5708] by curtis
Miscellaneous bugfixes (especially with the preview pane).
16:00 Changeset [5707] by curtis
Save VisBio output to a log file.

11/18/09:

12:44 Changeset [5706] by melissa
Prevent NPE if delegate reader was not initialized.
08:10 Changeset [5705] by melissa
Allow Deltavision files to have non-standard extensions.

11/17/09:

19:52 Ticket #437 (Feedback 1692: incell reader OOMs on text parse) closed by melissa
fixed: (In [5704]) Removed InCell ROI parsing; closes #437.
19:52 Changeset [5704] by melissa
Removed InCell ROI parsing; closes #437.
17:54 Ticket #437 (Feedback 1692: incell reader OOMs on text parse) created by omero-qa
 http://qa.openmicroscopy.org.uk/qa/feedback/1692/
15:13 Changeset [5703] by melissa
Fixed LUT parsing for multi-file BioRad datasets.
14:28 Changeset [5702] by curtis
Better logging for C++ proxy generation.
13:50 Changeset [5701] by curtis
Fix problem with -preload: do not create a DIS if the RAF was directly …
13:25 Changeset [5700] by curtis
Add debug messages to Location mapping methods.
13:24 Changeset [5699] by curtis
Better feedback when caching data with "-preload" flag.
11:54 Ticket #436 (Improve ND2 initialization time) created by melissa
Many Nikon ND2 files (particularly the JPEG-2000 variant) take a long time …
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