Timeline
11/12/10:
- 21:30 Changeset [7206] by
- Added analysis plugin. Made gray scale a separate class.
- 21:16 Changeset [7205] by
- Kludged up this class to fix a problem with IJ's StackWindow.
- 21:13 Changeset [7204] by
- Interface that communicates pixel selection by clicking on the gray scale …
- 21:10 Changeset [7203] by
- Made a separate interface to display the gray scale image. Handles …
- 21:09 Changeset [7202] by
- Made a separate class to display the gray scale image. Handles multiple …
- 21:09 Changeset [7201] by
- Tidied up comment.
- 21:08 Changeset [7200] by
- Loads a plugin to analyze fit results, using SezPoz.
- 21:07 Changeset [7199] by
- Annotation for plugins that analyze fit results.
- 21:07 Changeset [7198] by
- Interface for plugins that analyze fit results.
- 21:05 Changeset [7197] by
- A VisAD analysis plugin.
- 21:05 Changeset [7196] by
- Stub of an export to text plugin.
- 21:04 Changeset [7195] by
- Dynamically sets minimum, as well as maximum. TIdied up code & added …
- 21:03 Changeset [7194] by
- Dynamically sets minimum, as well as maximum. TIdied up code & added …
- 21:03 Changeset [7193] by
- Dynamically sets minimum, as well as maximum. TIdied up code & added …
- 21:03 Changeset [7192] by
- Dynamically sets minimum, as well as maximum. TIdied up code & added …
- 21:02 Changeset [7191] by
- Dynamically sets minimum, as well as maximum. TIdied up code & added …
- 21:02 Changeset [7190] by
- Dynamically sets minimum, as well as maximum. TIdied up code & added …
- 21:02 Changeset [7189] by
- Dynamically sets minimum, as well as maximum. TIdied up code & added …
- 21:02 Changeset [7188] by
- Dynamically sets minimum, as well as maximum. TIdied up code & added …
- 21:01 Changeset [7187] by
- Save channel with pixel, as well as x and y.
- 21:01 Changeset [7186] by
- Save channel with pixel, as well as x and y.
- 13:02 Milestone bio-formats-4.2.1 completed
- 12:24 Changeset [7185] by
- Tagged 4.2.1 release of LOCI tools.
- 10:08 Ticket #598 (ImageViewer's file chooser extensions are wrong) created by
- If you select "File > Save" from ImageViewer, the resulting file chooser …
- 09:58 Changeset [7184] by
- Updated version numbers to "4.2.1".
- 08:49 Changeset [7183] by
- Fixed a couple of bugs in ImageConverter.
- 08:46 Ticket #525 (Files cannot be saved from ImageViewer unless '-omexml' option was passed ...) reopened by
- With this command: […] This exception now appears when trying to save …
11/11/10:
- 11:13 Ticket #597 (Add support for .aim files) created by
- See files in data/aim/harry. The image dimensions start at 0x38; they are …
- 09:04 Changeset [7182] by
- Updated what's new for today's release.
11/10/10:
- 09:30 Changeset [7181] by
- Updated post-build instructions to reflect the removal of ITKFactories …
- 09:27 Changeset [7180] by
- Modified CmakeLists.txt for the BF-ITK build so that it will no longer …
11/09/10:
- 16:52 Changeset [7179] by
- Add BitsPerPixel to Bio-Formats Importer's Original Metadata window.
- 15:42 Ticket #596 (Recorded macros contain "open" twice) created by
- If you attempt to record a macro for the Bio-Formats Importer plugin, you …
- 15:26 Changeset [7178] by
- Don't correct the channel count in the case of RGB images.
- 10:01 Changeset [7177] by
- Added developer comments
- 09:48 Changeset [7176] by
- Test Update
11/08/10:
- 20:58 Changeset [7175] by
- Changed ome-io component back to using Java 1.5.
- 12:23 Changeset [7174] by
- * Updated stylesheets to ome-xml:r692. * Added test for Channel.Color.
- 11:26 Changeset [7173] by
- Demo using EJB components on Glassfish, supporting multi-language …
- 11:20 Changeset [7172] by
- Demo using EJB components on Glassfish, supporting multi-language …
- 11:19 Changeset [7171] by
- Initial import of the 'server side' implementation for the EJB, Hessian …
- 10:50 Changeset [7170] by
- Demo using EJB components on Glassfish, supporting multi-language …
11/06/10:
- 09:50 Changeset [7169] by
- Backported r6515, r6527, and most of r7071 to fix a few problems with …
11/05/10:
- 21:46 Changeset [7168] by
- Switched to tau from lambda. Added stretched exponential fitting. …
- 21:38 Changeset [7167] by
- Added setFittedComponents and refineFit, to enable cumulative curve …
- 21:37 Changeset [7166] by
- Added setFittedComponents and refineFit, to enable cumulative curve …
- 21:35 Changeset [7165] by
- Comment added.
- 21:35 Changeset [7164] by
- Comment added.
- 21:32 Changeset [7163] by
- Convert lambda to tau.
- 21:31 Changeset [7162] by
- Convert lambda to tau.
- 21:29 Changeset [7161] by
- Added get/set X/Y, needed to save fit results.
- 21:27 Changeset [7160] by
- Was using lambda, now use tau.
- 21:26 Changeset [7159] by
- Added get/set X/Y, these are needed to save the fit results.
- 15:51 Changeset [7158] by
- Fixes for truncated .dv files from QA #2988 and #2989.
- 12:42 Changeset [7157] by
- Remove any extra channels from OME-TIFF files. See omero:#3250, QA #2973.
- 10:32 Changeset [7156] by
- Hackish fix for potential IndexOutOfBoundsException; the real fix should …
11/04/10:
- 17:58 Ticket #595 (Overwriting compressed planes doesn't always work) created by
- If the new plane's compressed size is less than or equal to the old …
- 17:50 Changeset [7155] by
- Fix for overwriting TIFF planes.
- 13:41 Changeset [7154] by
- Fixed conversion of LaserMedium attributes with value "Unknown".
- 12:20 Ticket #594 (Double-check Image -> ROI linkages) created by
- Right now, I think most (all?) of the readers that populate ROIs do not …
- 11:54 SlideFormats edited by
- (diff)
- 10:49 Changeset [7153] by
- Only populate LightPath references if the LSIDs are not null.
- 10:26 Changeset [7152] by
- Allow .rec extension for MRC files. isThisType(RandomAccessInputStream) …
11/03/10:
- 16:14 Changeset [7151] by
- Updated showinf help text.
- 13:31 Changeset [7150] by
- Updated C++ headers.
11/02/10:
- 20:05 Changeset [7149] by
- A bunch of little export fixes.
- 10:40 Ticket #593 (Add support for Micro-CT VOL files) created by
- See data in micro-ct/amin/.
11/01/10:
- 17:32 Ticket #592 (Slidebook pixel data is not always correct) created by
- See files in data/slidebook/marjolijn, data/slidebook/roman and …
- 17:05 Changeset [7148] by
- A few fixes for writing planes non-sequentially.
- 17:00 Ticket #591 (Writers do not support overwriting metadata) created by
- See attached test case. In summary, writing some subset of planes using …
- 08:48 Changeset [7147] by
- Forward ported r7145 and r7146.
10/30/10:
- 12:57 Changeset [7146] by
- Added top-level compile target.
- 12:31 Changeset [7145] by
- * Fixed multi-series OME-XML export. * Fixed multi-series OME-TIFF export. …
10/29/10:
- 16:37 Ticket #590 (Series dialog should indicate the total number of series) created by
- The dialog that is shown when there are more than …
10/28/10:
- 13:35 Changeset [7144] by
- Finally fixed ND2 field index bug.
- 10:43 Changeset [7143] by
- Fixed a handful of NPEs, AIOOBs, and leaking file handles.
- 10:42 Changeset [7142] by
- Fixed a bug that prevented ROIs from being displayed.
10/27/10:
- 21:31 Changeset [7141] by
- * Backported r6227 to 4.1. * Fixed a subtle bug in calculating the pixel …
- 18:22 Ticket #589 (Add support for TIFF files with FillOrder == 2) created by
- See example file in data/tiff/john/. In essence, the bits in each byte …
10/26/10:
- 17:59 Changeset [7140] by
- Fixed an NPE and a few plane indexing bugs.
- 16:20 Ticket #588 (Consider writing decoder for compressed Flex files) created by
- The main reason to do this is so that compressed Flex files can be …
- 14:29 Changeset [7139] by
- Select SLIM Curve LMA as default.
- 14:29 Changeset [7138] by
- Select SLIM Curve LMA as default.
- 10:21 Changeset [7137] by
- Fixed timestamp indices, see omero:#3121.
- 08:26 Ticket #587 (Move color options to a separate dialog) created by
- Instead of the current color options, we could have a "Specify custom …
- 08:23 Ticket #586 (Preserve custom color options) created by
- The "Custom" color option currently does not remember which colors were …
- 08:21 Ticket #585 (Make error message windows more friendly) created by
- It's been pointed out that seeing a stack trace when something goes wrong …
10/25/10:
- 23:24 Changeset [7136] by
- Init start bin.
- 22:32 Changeset [7135] by
- Added 'quit' method to make the UI go away when the user cancels a fit.
- 22:31 Changeset [7134] by
- Added 'quit' method to make the UI go away when the user cancels a fit.
- 22:30 Changeset [7133] by
- Added image stack support for multiple channels. Support for multiple …
- 22:23 Changeset [7132] by
- Add multiple exponential support (doesn't seem to actually work though).
- 19:46 Changeset [7131] by
- Better colorization.
- 19:45 Changeset [7130] by
- A cheap variant of my ThreeColorColorize. Still emphasizes green (my …
- 18:16 Changeset [7129] by
- Fixed stage position indices.
- 16:20 Changeset [7128] by
- Fixed a handful of Javadoc errors.
- 15:31 Changeset [7127] by
- A few more fixes for small bugs exposed during testing.
- 14:23 Changeset [7126] by
- Reversed usage of OMETiffReader's getMetadataStoreForDisplay() and …
10/24/10:
- 17:28 Changeset [7125] by
- Fixed a handful of little bugs exposed during testing.
- 17:01 Changeset [7124] by
- Fixed scanline padding and various metadata parsing bugs.
- 15:56 Ticket #584 (Data repository cleanup) created by
- * Make sure that every file has an accurate configuration file entry. * …
- 15:42 Changeset [7123] by
- Fixed autoscaling for sliced stacks.
- 14:08 Changeset [7122] by
- Fixed TIFF file ordering problems.
10/22/10:
- 23:05 Changeset [7121] by
- Default to "EACH PIXEL" for better demo.
- 23:01 Changeset [7120] by
- Added chiSquare.
- 23:00 Changeset [7119] by
- Added chiSquare.
- 23:00 Changeset [7118] by
- Added chiSquare.
- 23:00 Changeset [7117] by
- Added chiSquare.
- 22:59 Changeset [7116] by
- Tidied up, made all the listeners anonymous inner classes. Added setters …
- 22:58 Changeset [7115] by
- Added quit capability.
- 22:57 Changeset [7114] by
- Added more setters and chiSquare.
- 22:57 Changeset [7113] by
- Removed debugging print statement.
- 22:56 Changeset [7112] by
- Added main loop that does fits based on UI input. Gets and sets …
10/21/10:
- 21:13 Changeset [7111] by
- Fleshed out.
- 21:12 Changeset [7110] by
- Doesn't extend StartStopListener any more.
- 21:11 Changeset [7109] by
- New method to set listener.
- 21:10 Changeset [7108] by
- New UI; not working.
- 21:10 Changeset [7107] by
- Cleanup, rewrote start/stop bars completely.
- 16:17 Changeset [7106] by
- Updated metadata support documentation.
- 11:02 Changeset [7105] by
- Adjusted canDoDirect to be true if the image is interleaved (avoiding …
- 08:48 Changeset [7104] by
- Updated version numbers to "4.2.1-DEV".
- 08:40 Changeset [7103] by
- Backported r7084 to 4.2.
- 08:39 Changeset [7102] by
- Backported r7055 to 4.2.
- 08:39 Changeset [7101] by
- Backported r7051 to 4.2.
- 08:38 Changeset [7100] by
- Backported r7042 to 4.2.
- 08:37 Changeset [7099] by
- Backported Zeiss LSM stage position changes to 4.2: r7040 and r7043.
- 08:35 Changeset [7098] by
- Backported r7037 to 4.2.
- 08:34 Changeset [7097] by
- Backported file stitching changes to 4.2: r7021, r7022, r7070, r7071, …
- 08:32 Changeset [7096] by
- Backported native component changes to 4.2: r7014, r7035, r7036, r7049, …
- 08:31 Changeset [7095] by
- Backported r7012 and r7013 to 4.2.
10/20/10:
- 10:37 Changeset [7094] by
- Converted to Maven Project for ease of download
10/19/10:
- 21:23 Changeset [7093] by
- Various tweaks to file grouping logic, so that datasets can be read even …
- 17:24 Changeset [7092] by
- Only populate Objective.NominalMagnification if the magnification is …
- 14:46 Ticket #583 (DeltaVision OMX read error) closed by
- fixed: (In [7091]) * Attempt to gracefully handle truncated Deltavision files. …
- 14:46 Changeset [7091] by
- * Attempt to gracefully handle truncated Deltavision files. See QA #2892, …
- 14:04 Changeset [7090] by
- Override get*LookupTable() so that LUTs are returned where appropriate. …
- 13:55 Changeset [7089] by
- Skip over ROI files that do not exist, instead of throwing an exception.
- 04:24 Ticket #583 (DeltaVision OMX read error) created by
- http://qa.openmicroscopy.org.uk/qa/feedback/2892/ […]
10/18/10:
- 21:54 Changeset [7088] by
- Default to 'each pixel' fit.
- 21:53 Changeset [7087] by
- Commented out excessive printouts that slow down the fit.
- 18:13 Changeset [7086] by
- A few more file stitching fixes.
- 15:59 Changeset [7085] by
- Close unused file handles.
- 15:48 Changeset [7084] by
- Fixed a few deprecation warnings and compile errors.
- 10:56 Changeset [7083] by
- Added better type detection to the text reader, see omero:#2740.
10/15/10:
- 21:24 Changeset [7082] by
- Removed imagej/ij/1.43, added imagej/ij/2.0-SNAPSHOT, …
- 21:17 Changeset [7081] by
- First plugins config file.
- 21:16 Changeset [7080] by
- Borrowed from SLIMPlotter.
- 21:15 Changeset [7079] by
- Many changes to SLIMProcessor, mostly for automatic plugin.
- 21:15 Changeset [7078] by
- New version of SLIM_Plugin, moved out of the default package.
- 21:15 Changeset [7077] by
- Automatically executed version of SLIM Plugin.
10/14/10:
- 19:45 Changeset [7076] by
- Fixed potential ArrayIndexOutOfBounds which prevented tests from passing …
- 18:23 Changeset [7075] by
- * Fixed various file stitching bugs. * Removed debugging statement.
- 11:01 Changeset [7074] by
- Parse stage positions from Fluoview/Andor TIFFs.
10/13/10:
- 16:12 Changeset [7073] by
- Populate physical sizes for all series.
- 14:56 Ticket #578 (bfconvert does not properly overwrite or append to files) closed by
- fixed: (In [7072]) Using bfconvert with an existing output file will now cause …
- 14:56 Changeset [7072] by
- Using bfconvert with an existing output file will now cause that output …
- 14:43 Changeset [7071] by
- Fixed bugs that prevented tests from passing in r7070.
- 13:09 Ticket #395 (Support for non-numerical patterns in FilePattern) closed by
- fixed: (In [7070]) Added support for non-numerical file pattern blocks, closes …
- 13:09 Changeset [7070] by
- Added support for non-numerical file pattern blocks, closes #395. You can …
- 12:05 Ticket #576 (Improve Zeiss LSM stage/tile position parsing) closed by
- fixed: After reviewing revisions to the 6.0 documentation, it seems as though we …
Note: See TracTimeline
for information about the timeline view.
